Id Trinity | FTRINITY_DN58478_c0_g1_i9 |
---|---|
Name Transcript | Ll_transcript_30252 |
Sequence | GTGATATAGAGAATTAATGAACCAATTACCAGTTAATTGGAGTACTCGTGGACTGCATATAACCCCAAACACTTCCGCGATTACGTGGCGTGTTTGGACA TGGAATTAGCCTACTATTTATTCAAACCATCCATTTTCCTCACACAAAAAATAATTAGAGAAAAACAGAGAGATTCATTCAAGCAAAGAAAGAGCGAGTG TTAGCGAATTCCGAAACAGAGCGCAGAAATGTGGCGGTGCGTGGCTCGTAGACTTGGTGCTCCACTTGCTTCTAATAGATCCTCTCCTAGATCTATCATC TCTAGATTCTTCTCTAGTGGTGAAGGCTCGTATACGGTGGTGGATCATAAGTATGATGCAGTTGTGGTAGGTGCTGGTGGAGCAGGGTTGAGAGCTGCTA TTGGACTTTCTGAACATGGTTTCAATACTGCTTGTATTACCAAGCTCTTTCCAACTCGTTCACACACTGTTGCAGCTCAAGGTGGTATAAATGCTGCATT GGGAAATATGACCGAGGATGACTGGAGGTGGCACATGTATGACACTGTCAAGGGAAGTGATTGGCTAGGAGATCAGGATGCCATCCAATATATGTGTAGG GAGGCACCAAAAGCAGTCATTGAACTCGAGAATTATGGATTGCCATTTTCCCGAACTGAGGAAGGAAAAATATATCAGCGTGCATTTGGGGGGCAAAGCT TGAACTATGGAAAGGGTGGTCAGGCTTACCGATGTGCATGTGCTGCTGATCGAACTGGACATGCTTTATTGCACACTCTATATGGCCAGGCCATGAAACA TAATACCCAGTTCTTTGTGGAATATTTTGCATTGGATCTTTTAATGAACAATGATGGCACTTGCCAAGGAGTAATTGCCTTGAATATGGAGGATGGAACG TTACATCGTTTCCAAGCTGCTTCAACAATTTTGGCCACAGGGGGTTATGGTAGAGCATATTTTTCTGCCACCTCGGCACATACATGCACTGGAGATGGCA GTGCCATGGCTGCACGTGCTGGGATCCCACTTGAGGATTTAGAGTTTGTGCAATTTCACCCAACAGGTATATATGGAGCAGGTTGCCTCATCACAGAAGG TTCTCGTGGTGAAGGTGGAATTCTTAGGAATAGTGAGGGTGAGCGATTTATGGAACGATATGCTCCCACTGCAAAGGATCTCGCATCAAGAGATGTAGTT TCTAGATCAATGACTATGGAGATTCGGGAAGGTCGTGGTGTAGGAGCCCATAAAGATCACATTTATCTCCACTTGAATCACTTACCCCCAGATGTACTGA AGGAGAGACTTCCTGGTATCTCTGAAACTGCTGCTATTTTTGCTGGTGTGGATGTAACAAAGGAACCCATTCCTGTTCTGCCAACTGTGCATTATAACAT GGGTGGTATTCCCACAAATCACCATGGAGAGGTTGTTACCATTAAAGGTGATGATCCAGATGCAATAGTTCCTGGATTGATGGCTGCTGGGGAAGCGGCA TGTGCGTCTGTCCATGGTGCCAATAGGCTTGGTGCTAACTCACTTCTGGACATTGTTGTTTTTGGTAGAGCTTGTGCAAATAGAGTTTCAGAAATTCATA AGCCAGGGGAGAAACAAAAACCATTAGAGAAGGATGCTGGTCAGAAAACAATTGCATGGCTGGACAAATTGAGAAATTCAAATGGTTCGTTGCCAACTTC TAAAATCCGGTTGAATATGCAAAGAGTAATGCAAAACAATGCTGCTGTATTCCGTACGCAAGAAACATTAGAAGAAGGTTGTCAACTAATTGATAAAACA TGGGAGAGTTTCCATGATGTCAAGGTTGAAGACCGAACTTTGATATGGAACTCTGACTTGATTGAGACTATTGAGTTGGAAAATCTTTTAATAAATGCCT GCATCACAATGCACTCTGCCGAAGCCAGGAAAGAAAGTAGAGGTGCTCATGCCCGTGAGGATTTCAAGGT BLAST |
Tissue | flowers |
Gene name | LI_gene_77408; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_30252
Blastp | Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial from Arabidopsis with 90.14% of identity |
---|---|
Blastx | Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial from Arabidopsis with 88.76% of identity |
Eggnog | Succinate DeHydrogenase(COG1053) |
Kegg | Link to kegg annotations (AT5G66760) |
CantataDB | Link to cantataDB annotations (CNT0002683) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421070.1) |
Pfam | FAD binding domain (PF00890.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |