| Id Trinity | FTRINITY_DN58487_c0_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_29936 |
| Sequence | CTTTTGTTTTATATATATTCTTCCTTCTCTCAACCTCTCTCTTTGTCTCTACTCTTTCTCACCACTTTCACCATTCTTACTTACTTTCTTTATTCCATAT TTTTCTCTCTAACCCAAACCCAAAATCTTTCCTTTTTTTTTCTGGGTATATCTCTTTTCCTTCTTCTTATCAACAACTCTTTCGAATCTTTCATTCAATT TCATCAAGTTTTTGTTTGTTGTTGTTTTCTAAGTTCTTATTAATTAATTAATTAATGGGGTTGTGGAGATGGTCTCAATTCATTTAACTTCTGCTTTATA GATCCTGTATTTTTTTATTGCTGCTAAAAGTTTAAGCTTTTAATCCTTATTCTTTACTTCTATGTTTAATGAGCAAAAATGAATTGCTAGGAATGCCATT CCATTTTTGTACACGCTTATTCCATAAGCTGAAAAGAGCTTATATGAGTATAATAAGTTATTTTCATAGCTTGTTCTATAAGCTCTTCTAAATAAAGATC TATAACCTTATGTCAATTCTAGAGATATCTTTCCAATGCACGCTTTTTGTGAACAAAGTTGTAGAAAAGTGTGGATGGGGTTATAAAGGTTGATCTATTT CTGGGTTGTAGACTTCAAGCAAATAATTATGCAGTTTTGCTTTATAGATTTTGAACTAGTGTGTGCACTTCTATGTTATTTGATTTTTTCACAGCTCTTG AAAGAGATATGTGATGAACCATAAGAACCATATATTTATTTCAAATTGGAATGACATGATGCATTTGAGTTAGTTGACTTGTTGCTTTTTACAGTTTCTA TATTTTAGTTGGGAAAGAAATAGAAGTTGGAATCATAAGCTTGTTTGCATACATGATTGGTGTTGTTTAAGGTAGTAGTTTATAGATACTTGAAGATTAT CAATGAAATGTTTTGCTTATGAACATGACTTTGCTAGTATGTGTGGATCAGCAACTTATGAATGCAATTTCTTCATTTTCTATTTTGATTGTTCTATTTC TTCTATATTGGCATTATCTTTCTCTTGCTGGACATCAACTTGGTGAAATATTCAAATGATTTATACTTTCTGCTTGACTGCATATAGAACTCAATTCCCC CAGCTTTTTTAAAAGCTGGTTTCATCACTTGCATATGCAGGCTAAAGAGGTGATAGTGAACAAAGTTGTGACTTGTGAGAAGGGTTCCTTGATTAATGGC ATTTGAGCACTACTTTTCCGATGAACGTAAAAGCGAAAGCATTCCCAATGCTGTGACAGAAACAGAAAATTACAATGGTTGTTTTGATTGCAACATCTGC TTGGACTTTGCATATGAACCGGTAGTCACTCTTTGTGGCCACCTTTACTGCTGGCCTTGCATCTACAAGTGGCTTCATGTCCAAAGTGATTCTCTTGCAG CCGATGAACACCCGCAGTGCCCTGTTTGCAAGGCCGATATATCCCATACTACAATGGTTCCACTCTACGGCCGAGGCCAGGCCTCAAGTCAAAGTCACCA TGTTGGAAAATCATCCACTTGTTGCGATATTTTCATACCACCTAGACCCTCTGCTTCCAGTGCTGAAGCTCTTTTGGGAACGTCGTCTCAAACTGGTCAA CAACTTCCATACCGAAATCCTTATCAGGGTCACGGCGAAGAGGATTCCTCCCCTCAATTGCTTAATCCTGGATATCAAAACCCTATGGTTGGAATGCTTG GAGAGATGGTTTATGCTCGAGTTTTTGGCAATTCAGAAAATTTGTATGCCTACCCGAATTCTTATCAGCTGATGGGAAGTAATAGCCCAAGTTTGAGACA GCAAGAGATGCTGATAGACAAATCACTCAACAGAATTCTGATTTTTCTTTTTTGCTGCTTTGTTCTGTGTCTTATTGTCTTCTAAGTAAGTAGTTGAGAT TTTTAATATTCTCCCATTCCTTGTTGTATACTTTGTAAAGTAGCATGAATGCAATTTATATTCTTCTGCATTTTGCAGAAAGACAGAGTTATTATAGCCT TATTTTATGGTATGCAGAGGTTTTCTAGTTTGAAAATGTAATATCTAATGTTGTTTTGGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77480; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29936
| Blastp | E3 ubiquitin-protein ligase RMA1H1 from Capsicum with 49.1% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RMA1H1 from Capsicum with 47.09% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107855034) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435392.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |