Id Trinity | FTRINITY_DN58487_c0_g3_i3 |
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Name Transcript | Ll_transcript_29945 |
Sequence | CTTTTGTTTTATATATATTCTTCCTTCTCTCAACCTCTCTCTTTGTCTCTACTCTTTCTCACCACTTTCACCATTCTTACTTACTTTCTTTATTCCATAT TTTTCTCTCTAACCCAAACCCAAAATCTTTCCTTTTTTTTTCTGGCTGGTTTCATCACTTGCATATGCAGGCTAAAGAGGTGATAGTGAACAAAGTTGTG ACTTGTGAGAAGGGTTCCTTGATTAATGGCATTTGAGCACTACTTTTCCGATGAACGTAAAAGCGAAAGCATTCCCAATGCTGTGACAGAAACAGAAAAT TACAATGGTTGTTTTGATTGCAACATCTGCTTGGACTTTGCATATGAACCGGTAGTCACTCTTTGTGGCCACCTTTACTGCTGGCCTTGCATCTACAAGT GGCTTCATGTCCAAAGTGATTCTCTTGCAGCCGATGAACACCCGCAGTGCCCTGTTTGCAAGGCCGATATATCCCATACTACAATGGTTCCACTCTACGG CCGAGGCCAGGCCTCAAGTCAAAGTCACCATGTTGGAAAATCATCCACTTGTTGCGATATTTTCATACCACCTAGACCCTCTGCTTCCAGTGCTGAAGCT CTTTTGGGAACGTCGTCTCAAACTGGTCAACAACTTCCATACCGAAATCCTTATCAGGGTCACGGCGAAGAGGATTCCTCCCCTCAATTGCTTAATCCTG GATATCAAAACCCTATGGTTGGAATGCTTGGAGAGATGGTTTATGCTCGAGTTTTTGGCAATTCAGAAAATTTGTATGCCTACCCGAATTCTTATCAGCT GATGGGAAGTAATAGCCCAAGTTTGAGACAGCAAGAGATGCTGATAGACAAATCACTCAACAGAATTCTGATTTTTCTTTTTTGCTGCTTTGTTCTGTGT CTTATTGTCTTCTAAGTAAGTAGTTGAGATTTTTAATATTCTCCCATTCCTTGTTGTATACTTTGTAAAGTAGCATGAATGCAATTTATATTCTTCTGCA TTTTGCAGAAAGACAGAGTTATTATAGCCTTATTTTATGGTATGCAGAGGTTTTCTAGTTTGAAAATGTAATATCTAATGTTGTTTTGGG BLAST |
Tissue | flowers |
Gene name | LI_gene_77480; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_29945
Blastp | E3 ubiquitin-protein ligase RMA1H1 from Capsicum with 49.1% of identity |
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Blastx | E3 ubiquitin-protein ligase RMA1H1 from Capsicum with 47.09% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (107855034) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435392.1) |
Pfam | Ring finger domain (PF13639.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |