| Id Trinity | FTRINITY_DN58489_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_30516 |
| Sequence | ATTCTGGGAAGCATACTTGTTCCTAAACCCCATAGGCAAAGAATACTCTGATTACACCTCAAAAAAGTGTAACCTTGGATACATTTTTCTCGTAATATCA CACCATATTTGGGTAAGAAGCTAATTTTTTTGGGTGTTTGACTATTCTCCCAAAAAGTGTGATTTATAAGAGTCGTTTTAGTCCAGTAGACCCTTACACC ACTATACCAAGGCCCCTACCGAGAAGAAAAAAATAGAAGAGGAGGAGAGAGGAACTATATAAGAGTATTGTGGTTGCATGTGAGACACTTTGACAGAAAC CCCTGAATTTTGCTGTGCTGACTTGTTTGCTTTGCTTTGCTCTGCTCTGCTTTGCTTTGATTTGGTGAAGGATAGGTCTACAAAACAAAAACATCCTTAG TTTGTGTTTTATTGTGCAACAACACAATGTCTTCTTCCAATGTTGACACTGAGAGAGAGATTGTAAAGAGTCTTAGTGATTTGGGAAGGAACCTTCTCAA ATCCATTGCTCTTCAACTTCAAGATAAGAACCTTCTTCAACTTCTCAATGAATTGGCGCTAGTGTTATCAACTATGGATCAAGCACCAACCGATCCAATT TCGAAATCACTTTTACCTTCAATGAAGGCATTGATTTCTGATGAGCTTTTGAGGCACACAAATGAGGATGTTAAAATTTCAGTTACATCTTGCATCACTG AGATTGCAAGAATTACAGCGCCAGAAGTCCCTTTTCGCGATGAACTGATGAAGGAAATTTTCAAGCTTACAGTGTCAGCTTTCGAGAAACTGTCTCATGT ATCTGGCCACTGTTATGAAAAAGTACTTTCGATAATTGATAATTTTGCGAACCTCCGATTATGCTTGGTCATGCTGGACCTTGGGTGTGATGACCTGGTT ATTGAGATGTTTCAGCATTTCTTGACAAATATAAGGTCAAACCATCTACGCCATGTAATTGATTGCATGCAAAACATAATGACCACGGTCTTGAGTGAAT CTGACGAAATTTCCTTAGATCTTCTAAGACCTCTATTACACAGTGTAAGAAATGAAAATCAGACTATTTCACCCATTTCTTGGACATTAGGGGAGAAAGT AATTACGAATTGTGCCATTAAGCTTAAGCCCTATCTCATGAAAGCAGTGGAGTCTTCAGGTCGAACTCTTGATGAGTATGCACAAATAGTTTCTACTATT TGCCAGAATGGATTTGAATCCTCCAAACATGATCATTCAAATGGTTCTAAGGGGAAAGAGGTGATCATGGTTCATGAACCAGATATTACTTGTGTGATAG ATGTCCTAGCTATGGATGATACTAAATTAAACATTAGAAGTGCCGGTGCCAGTGCTTCTACTAAGGATCCTGAAGTTATCAAAAAGTCTAGGTCAAAAAG GAAAAAGCATTCTGATCCTATCAATCACTCGAAAAGAAGCAACATAAAAACCGATCCAGAAAATTGCAATTTAGTGTCTGAGCAGGAGCCAAAATCAGAA ACTCGGCTGAACACTGTACCAAGGAAGAGAGATCGTAAGCAGAATTGTTTATTGAACGCAGGGGAAGGCTATGATGGCTCTTGCGTTTCTGAGGGAACAA AAACTGGAAAATCAGCTCTATCCAGAAAGGCTCATGGTAGCAGCTCTTCTTTTTCACCTTCTGAAAAACCTGCTTCTAGAAAGGGCAAGTTGCAGTCAAA GCCTAAAACTGCAAGTGAAGGTCTAGTTTCTAAGCCACTAAATGTGAACAAAGTAAAACCTGCGCAGTCCAGAAAGACGCATAATGTTGGCAGCATTGTT CCATCTGATAAAAGTGCTGCTTCAAACAAGGTTAATGCACAGTCACAGCCTGAAGATATTAGGAAAGGTCATGGAGCTTCAAATTCTAAACCGAAGGCTG AAGAGAATACTTATGTTAATTCTCCTTTGACAAATGATAACATACCTCATGGAAGCCGCTCCAAAAGGGGACAGCGAAGGAAAAGAAATAGGACAGACAA TCAAGATGTTGATTCTAAATCTGTGTCAAAATTAAAGGAAGGAAATTTGAATCCTCTGTTCGGAGAGACTGCTTCAAAATCTAATGGTGCTAGGATGGAA AAGGAGCCAGAATCTGGGAAGGATGCTGAAGCAAAACCTAAGACATCCATCAGAATCAAATTTCCTGCTAAAAAACATGATAAGAAAACTGTTTTGGCTC CTGAATTGGCAGTTGCTGACATGGAAACTAAGGATTCTTGTGAGAATAGAGAAGATTCCAAATCCTCAGTAAGGCGAAAGAGAAATCAAACCACGCCATC TGAAACTCGTGAACTTGGTGACTCATTGGTCGGTAGTCGGATCAAGGTGTGGTGGCCAAAGGACAAAATGTTTTATGAAGGCGTTGTGGATTCGTATGAT CCTGTCAAAGGAAAGCATAAGATTCTGTATGCTGACGGTGAGGTGGAAATCTTAAACATGAAAAGGCAGCGCTGGGAGGTAATTGGTTCCGATGTTCCAC CAGATGATGAACAAGGACATGCTCTTCATAAGCTTGCAGAGGCATCATATATAGCACAAAAAATCAAAGAAGAACCTGATTTGGAATCAGACAAGAGTAA AAGCATCAATGTCCGGTCCAGGGGTAGAACTTCTTCAAGCATCTCCAAATATTAATCTGCAAAATCTGCTATCAAATCTGTGGATTCTTCTTCTGCCGAT AAACATCTGAATGATCTACCGAAAGCTGACGGTGTTAAAACCACTGGTGGGAAGCCTAAATCCACAAGAATGAAGACTGGTTATGTCTAGATTTGAAGGT TACATGTAACTAACTATTCTTAATGCATTGAATGTATGCAGTGTTTAGTAGTGCCAAGAGGTGGATTTAGAGCTTTTACTTTGGCTTTTCCATAGGAAAC TATCAGTTTAGTCTCTTTTGGTTTCATATTTTATCTCAAGAACTTAGCATACAGGTCAAGCCTCCAAAACTCCTCTTTAGAATGGTTTGGTATATTATGG AGTGAAAAACTATTTACTGCACTCCAAACCCATTTTTGAACATGGTTACTTGTATAAAATGACTTCAACTATTTGCAGTATATGGGTTAGTTTCATTCCT ATTTGTTGGCAAGGTTGGTATTTAGTAGCAAACAAAGATCACTTTTGTCAAGGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77499; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_30516
| Blastp | Sister chromatid cohesion protein PDS5 homolog B-B from Xenopus with 23.12% of identity |
|---|---|
| Blastx | Sister chromatid cohesion protein PDS5 homolog A-B from Xenopus with 27.07% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (495695) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433673.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |