| Id Trinity | FTRINITY_DN58500_c1_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_5246 |
| Sequence | CAAGTTTAGCTATATCCACTTTAATATGCATATTATGATTTATGCAAAAGTAATAGACACGTGCATATAGTGGATAAACCTGCATATTAAAGTCAATAAA TATAACAAATTATGTTCCGTGATAAAAACAAATCTCATGCTGTCCAAAGATGAACATCGTGACCAACATACCTTGACGTAGGGAGCTCCATCCATCCTTA TCTCAACTCTCAATAAACTAATATAACTTTGAAATAATTTGGATCATTTAGGCACTACTTTTTTAATATTAAATATAGATTCTCTTCACTTTAATAAGAC AATAATAGTAATAATATAAGATCATCATATTCATCATCATCTCATCTTCATTAGTACCATGTTGCATAGGATCAACACTTCAAGGTCTCTTTGTGCTAAG GTTTTCAGAACCAAAACCCACTTTCATGCTGCTGCTGCTTTCTCAACTTCCTTGCTCTTTGATGATACTCAGATACAGTTCAAAGAAAGTGTTTCTCAGT TTGCAACGGAAAACATTGCCCCTCATGCTTCAAAAATAGACCACACAAATTATTTTCCAAAGGAGGTTAACCTATGGAAAAGCATGGGAGAATTTAATCT CCATGGGATTACTGCACCAGAGGAATATGGAGGGCTTGGTCTAGGGTACTTGTATCACTGTATAGCAATGGAAGAGATTAGCCGTGCCTCGGGATCTGTT GGTCTTTCCTATGGTGCTCATTCTAACCTGTGTATCAATCAGCTGGTGAGGAATGGAAGCCCTGCTCAGAAAGAGAAATACTTGCCAAAGCTTATCTCCG GGGATCATGTGGGAGCTTTGGCAATGAGTGAGCCAAATTCTGGTTCTGATGTTGTCAGCATGAAATGCAAGGCTGATCGTGTAGATGGGGGCTATGTACT GAATGGGAACAAGATGTGGTGTACTAATGGTCCAGTTGCTCAAACATTAGTTGTCTATGCAAAAACAAACATAACAGCTGGGTCAAAAGGAATCACCGCA TTCATCATAGAGAAGGGAATGCCTGGGTACATTAAACTGAACCTTGACATAAAGTTAAATGATCTTGAGTAGACAACAACCTCTATACTTCAACTTAGAT AATCCTTAAGCAATACTGTGATCACATGCTATGGCTAATCTTCTAAGTTTCAACTGAACCTTAATTGTAGCTCAAACAACTGGACAATAAACTGTACCTT GAACCAAATTTTGGTATGTGTTTTCAACTCTAGACTCATGTGGTGGAACTTATTAGGTTCCATAGCAGGAACCTTTCATCATCAATTCGTTCAAATTTGA TTTCTTAGTCTGTAGCTCTCAAAAATCCTTCTCTGAAAAGAAAACTTCTTACATGGTTGACATGGTTGGGATCTCTTTTAAATGATAAATCATTTGAATG CAGTGAAAAAATTACATGTTAAGGTTGACAGTCTGACATTTATTTCTGTTTGGCTACAGATTCAGTACTGCCCAGAAATTAGATAAACTCGGGATGCGAG GAAGTGATACATGTGAGCTTGTCTTTGAAAATTGCTTTGTTCCAGAAGAAAATGTTCTTGGGAAAGAAGGGAAAGGTCTTGCAAGTTGCAATTGCTTCTG TTTATTACTTTTAAAGCAAAGTTATCTTATAATATCATTTGGTATAGTCCAGCCTGCAAAAGTTTGTTGCAAGATAGTGGTTATTCTTTATGCTCATGTT GATAGTTCTTATCAGCCTCTCTCTCTGTCTCTTTTTTACTAGTGATGTAAAATCTTACAGAAATCACGAAAAAGTCGCAGTTATATTCTTACCCTTGTTA CATATGAACCAGAATTTGTTTCTATTGGCAGCATTTTCCTGCCATACTCTACTTACAAACTGATAAAGTTTCCTACACTTTTTACATTGTAAATGCTGAT AAAAAAACATTTCTGTTAATTATTTTACATCCAAGTGTCAATAATAGTCCAGCGATACCGATTTTTTCTCTTCATTCAGGAGTCTATGTCATGATGTCCG GGTTGGATCTGGAGAGACTTGTTTTGGCAGCTGGTCCTCTTGGTATAATGCAGGCATGCCTTGATGTCTGCCTTCCTTATATTCGACAAAGAGAGCAGTT TGGTCGCCCTATCGGAGAGTTCCAGTTTATACAGGTTCATAATATGAAACAACATAACATTCCCACCCTACGGTTAACCTGCAATTTGTTGTAAGAGAAT CTTAGCCTTAACACTTTTATTACAGGGGAAAATTGCTGACATGTATACTTCTTTACAGTCCTCAAGGTAGAAGATTCTAATGTCATGGTACTCTTCTGTT TTTGAAAATAAGTTTGCATGGCACTAGATAACATCTTTCATTTCAGGGCTTATGTGTATTCTGTAGCTCGGGATTGTGACAATGGAAAAGTTGAACCAAA GGTGCCTCCACTTATCTTTATCTTTTGGTTACTAGAATATTATTAATTTTTTCCTTGAAGATGTAAGCTTCATCATGGGTTCTTTAAATTTATTATTGGC TATTTTCTATTAACTAAACTCCCCACATAAGGAATTAAGGATACACCCCAGTGTTTTAGATGGATGATGATGGCCTAATAAAATTCCGCCATCATGGCAT TATAGGCAAATACCGGATGTTATCATGGTGATTTTTTGGTAGCCTAATACACGAGGCTTCCACATAGTGGAGTCTGAGGATGGTAGATGTATGCAAACCT TATTTAGAAGCTGTTTTCAGAATTTAAACTCATAACCTCATGATTACTAAAACAACAATCATTGTGCCAAAAATATACACGTAAAAAATAAATAATAACA TAAGCCACATGCCAAGTCATTTGAGGAGCTAATATGGTTAAGAATTTCTTGGAAAGACTAAGCAGATGGTACTTTGAAGAACTAAAATTACTACTGACTC TATTTTTGCCATGTTTTAAGGAGCTTGAACTTAAAGGTAAGATGTTGGGTCACTATACTTCTACTGGTGCTATTTTAGTCTACCCCTCAATACAACAAAC TTTCTGCTTTTCATGCTCCCTTTCCTGCTAATTTCAGGATTGTGCTGGAGCTATACTTTGCGCTGCCGAAAGAGCAACACAAGTTGCTTTGCAGGTAAAT AATTTGTTTGCATATGTTGTTATAGAGCCAGGGATTCCAAGGGGGCAAGCACCAGTGCTCCCCCATTCATATATTTCGTACAATTAGTTATATAGAGTAT TTTTTAAATGTAAAGTACCTTCTATATGCATATATATATATATATATATATATATATATATA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77584; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_5246
| Blastp | 2-methylacyl-CoA dehydrogenase, mitochondrial from Solanum with 76.79% of identity |
|---|---|
| Blastx | Isovaleryl-CoA dehydrogenase, mitochondrial from Solanum with 81.25% of identity |
| Eggnog | Dehydrogenase(ENOG410XNMY) |
| Kegg | Link to kegg annotations (102589539) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448719.1) |
| Pfam | Acyl-CoA dehydrogenase, N-terminal domain (PF02771.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |