| Id Trinity | FTRINITY_DN58506_c0_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_7112 |
| Sequence | GGAGAAACCATTGTACGTTATTTTCCCTCCATTCAGGTGGATTCGTTTGTTTTTGTCGGAGGTTGGTGACTTTTACAACAACCGCCGCAGAATCCGAAAC CCACGTTTCTCTCATTCTCTTTTTTCCCACACAACACAAACAAAAATCGCATTTTTGAAGAAGAGAGAGAAAGAGTTTGAGAATGAGAGGAGAGAGAGTG TGAGATAGACAGAATCTAACCCTCTTCTTCTTCTTCCTCTTCCGCTCTTCTTTCCTTTTTTTGATTCATGCTTCATTTCTTTGCAAGATTCTTGTATGTT AGTTCTGTGAATTTGGATCACAAATATGAGTAAAAAAAGTGCTGAATTATTGCCTCAGGGAAATGGAAATGGTGGTGCTTCTCTTCACTCTCCTAATTCT GACCCTCAGCCTAGGCCACCAAAGCATCTAGGTTCTCATAGTGGCAAGGGAAATGATAATACGGTTTTCAAGAGTGGGTCACTTTTCATATCCTCCAAAG GAATTGGATGGACATCATGGAAGAAAAGGTGGTTTATTTTGACAAGAAGTTCACTTGTTTTCTTCAGAAGTGATCCGAATGCTCTTTCTCAGAGGGGTAG TGAAGTGAATTTGACACTCGGTGGCATTGACCTCAACAATTCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTACAATTTCCTGACATCCGTG ACGGACGAGCATTCACACTTAAGGCTGAAACTACTGAGGATTTATATGAGTGGAAGAATGCACTTGAGGATGCTTTGGCACAAGCACCAAGTGCTGGTAA TTTGAAGGGGCAAAACAGTTTCTCAAGGAACGATGACATTGATTCATTTGAAATTTCTATGGATCAGTTGAAGGAGGTGAAGGATAGACGAGAGCCAATG AAATCTACAGTCACCGGCCGACCAATTTTACTTGCTTTGGAGGATGCTGATGGAACTCCAACTTTTTTGGAGAAAGCCTTGAGGTTCATAGAAGATCATG GAGCCAAAGTCGAAGGGATCTTGCGACAAGCAGCTGATGTTGAGCATGTTAAACATCGAGTGCAAGAATATGAGGACGGAAAAGTTGATTTTTTGGAGGA GGAGGAGGACGCCCATGTTATTGCTGATTGTGTTAAGTATGTAATCCGGGAATTGCCGTCTTCTCCTGTCCCTGCATCTTGTTGCAAGGCACTGTTAGAA GCTTGTAGAACTGGACGTGCCAATAGGGTTTCTGCCATGCGCATAGCAATATGGGATACTTTTCCTGAGCCAAACCGCTATTTATTGCAAAGAATACTCT TGATGATGCAAGCTGTAGCTTCCCGCAAAGCTGAGAATAAAATGAGCTCATCAGCTGTGGCAGCTTGCATGGCACCATTACTTCTTCGTCCCCTTCTAGC TGGAGATTGTGAGATTGAAAATGATTTTGATGTTGGTGGTGATGGTTCAGTACAACTTTTACAAGCAGCAGCTGCTGCAAACCATGCTCAAGCAATTTGT ATAACTTTATTAGAAGAATATAACAGCATATTTGGGGAGGGTTCTGAATCTCCCGATATATACACCGACACAGAAGAGAGTGGGTCTGAGAGCGAGGAGG CTACAGATGATGATTTGTCCTATGATGATGATGAGGATTATGACGATGAAGAAGATGGATCAGTACACGAGTCTGATGTAGAAGATGATCTTGTTAGTGA ATCCTATAGTGAGACTGGAGAGTCTCAGGGCAATGATGATAAGGACCATGATGGTTCTGGTCCAAGTTCAAAATCCTCGGGTGCGAGTGAGGAATTTAAA GTCATTCAACCATCAAAATCACTTAAAGGCTCACGACCTCAGCATCAAGATATCAAAAGCAGTGAAAATCTCACAAATCTAACTAAGAATGCTTGTGCAG ATCAGTCCAATGAGCCTGCTGATATTGTTGGAGGTGTTTCCACTGACCATGTTACAATGGATAATTCAGATTTTACTAGCCCTCCACATATAAAAAAATC TATGACCATGTCTAATGGTGGTGCTCCAAGTCCAACACCTCGACGCCGCACCATGTTGGGGCGTACTTCTGCAAGGAAGAATCTTTCCATGGAATCCATT GATTTTCCTATTGACGATGAAGATGAAATTGAAAGGCTTGAAGCAACTAGGACAGAATTGCAAACTCAAATAGCACAGGAGGTGGAGGCAAATGTAAAGC TGCAATCTCATATTGATAGAAGAAAGAAAGAGTTGCAAGAGCGCCGTTTGGCTCTTGAGCAAGACGTGGCTAGGCTACAAGAACAGTTGCACAAGGAGAA GAAGTCTCAGACCAAATCAGACCTTGAGGAATTAGCTTTGGTAGAAGTAGATCTCACTGATTTGGAGCACAAGGTTGAAGAACTTGGGATTCGTCTCAAT GCACAACTTGAGCAGAATTCTGGATCTACTTTGGATTCCTATAACCAATCGGAACAAATATCAAACGATGAAAGAAAATTGAAAAGTAAGCCAGATACTG ACCGGAAAAATAAGCCACATACTGAAGTTGCTGCCACATCACAATCTGACAGGTCAATAAGTAAGGATACTAATCTTGGTGGAGCAGAAAATGATAATGA GAGAAAGTCAGAGTCAATACCATTTTCAAACAAACAGCCACCAACTAGTTCCAAGAAATCTGGTTCAAAGGGTGAGGGAGCAAATTCCACTCCTTCTGCA TTGACAAAACTGACATCCAGGCTGAACTTTTTGAAGGTGCGCCAAAGTTCGGATAAAGGACGTGATCGAGATTCAATTTCAAACAACCTAGAAAAAGGAA AAGGACCTGAAACTCAATATGCGGCAAACCAAGAAAAGGGTAGAGGCTTAGACAGCTCCCATTCGGGCAAAGAAAAATCACATCAAAGTTCAGAGAAATT AAGAAAGTCGGATAGTCAACCAGGCTATCATTCAGAAGGGTGGAATCCAAATCAACATCCAAGACACTTGGAAAGGGGAAGATCAGAAGGCCATCATCCG TCTTATAATGCCGATAAAGGACGATGATGACAAGGTCAATCTTTCGTTACAAGTTCCAGAGTGGTACTCAGCCACTGCAATCAATCAGTTTTTGTTGTCA AAGTCTATCATTGCTTATGTCTTCAACAATGTTTTGAGTGGTTTTATGAAATACAGTTGTAAGGAGAATCCTTCTTAGTCCCTAGAGACAAAAGTACAGA ACCACTCCAGTTTCACCAAAAAGTAGGATGCCCAATGCATAGTTTGATGGTTCAAGCATATCCATGAAATAAGCTGAACTGCTTGAAATCTAACATTGCT GATTTGTTCTTACTAGCTCAGTGAACAGAATGATTGTTATACAATTACATTATCATATTTGTAACTGCAATAATGCTGTTGTTTGGCATAAGCTTGCAGA GCATTATGCAGATAGATAGAACAGGGCTTAAGTAATATTTTTGGTATGACTAATTTTACATTTCTTAATTTCACTGTGTATTCATGTTACAAAAATATAT GTCCAGAAAGGAAGAAAAAGAAATGCCATGAAACTTATAAAGCTAATAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77643; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7112
| Blastp | Rho GTPase-activating protein REN1 from Arabidopsis with 47.27% of identity |
|---|---|
| Blastx | Rho GTPase-activating protein REN1 from Arabidopsis with 47.34% of identity |
| Eggnog | rho GTPase activating protein(ENOG410XR4E) |
| Kegg | Link to kegg annotations (AT4G24580) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438505.1) |
| Pfam | RhoGAP domain (PF00620.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |