| Id Trinity | FTRINITY_DN58512_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_6457 |
| Sequence | ATTTATTTCACATCCCTCAACATTCTCTGTATCTCAATAAATAATAAACAATAGCTACCTTCATTTCACGCTATCTTCCATTCATCTCATTTTTATACTC TCTCTTCATTTCTCATCCTTCCTTATTCACTTTTTCTACTTCTCAAACCAGGTCCCTTCTTCCATTCTCTCTTCCTAATTCAAACCATTCATTTTCTCAT TTTTTGCTTAATTCTATTATTTTGTCTCTCATAACTTCAATTTATGTTTCTAACTTTTTTGTTTTAATGTTTAGGTATGGCGTCAAAACGCATCTTGAAG GAACTCAAGGATTTGCAGAAGGATCCTCCCACATCCTGCAGTGCAGGTCCTGTGGCTGAGGACATGTTTCACTGGCAAGCAACAATCATGGGACCTGCAG ATAGCCCATATGCAGGTGGTGTTTTCCTTGTCTCAATTCATTTTCCTCCGGACTATCCCTTCAAGCCACCAAAGGTATTCTATCCTTCTTTGCTTTTTTT ACCCACATTGGTAGCTTATATTGTTGCATCTTATGATGTTGCATTTATTTTGAGGCCTGTTCAATTATTATTTTTTATATTGGTTTGAAACAAATTGACA CCACCCTGTTCAGATCATTATCCTTGGTGTTGTATCTATGCATTTGGAACTAGTTTTACATCATCTTGTTTCAAAGATGAGGGTGATCTTCATGGTCAGC CTTCTCCAAGTGTAGGTTCAACCTAGATTCTTGACAAGCTTTGCATGCACTGCCCTGAGTCCCTAACTGTTGCCAGATTGACTGGTTTGCGATATGGCTT GGATTATAATCAAAACTGTTCACGTCTAGTGCCCTTGACTAGTTCCACGGTTCAGGCTTACCATGCAGGAGGAGGACCCATTCGTTGTCCAACTGGTCGT ATCAGTCTGTCACACCAGTTTTTAGAGAGTTGATCTATACAGGTTACACGAATGATATCCCTGATGACTACAGATGCTGGAATTCTTCAGTGGCAGTGGA TGTGATGTTTTGTAAAGTACCATGAACCCTGAAGTCTCTGTTCTCCACATACTGAGGTGGCAAAAGATTAAGAAGTTAATATTGTTAAATTTTTATGTAC AATAGTTGATTTTGCCTTGTGGCTAATCTAGCAACCACATTCTGCGTATTTTTAACACTTGATGTGATCGTGTAGAAAACATCATAGGAAATTTGGCTTG TTGGGCCAGCAGCTCATTTATTATCATGGTCATGGCTGCTACCGTTGATTTTAAGGCTCAGTCCTTGTGAAAAAGTTCTGCTGTGATAAAGAATGCCTTG GAAAATCCTGTCTAACAAGTAACAAACATCATGCATATTTCTGTCCACTAATAGGTAGCCTTAACCTGAATATTTTGGTTCTGGAATGACACTTTTTTCA CTTAAAAGCCTTTTGCTTTCCTTTTCATGCAGACACATGTATATCACTGGTATGTGTCGTGCTATGAAGCTTTTTAACCAATTATATGCTTCATAGTGTC TATAACCATCCAGTCACTAATGAGGTTGGAAAGAAAGTTGAATTAACGGTTGCATGATTAAATCTTGAATGTTAGTAGTGATGTAACCCTCCACTTGACT CTGTTCAACTTTAGTGAGATGTAAAATTTTCATTTTCCGTTATCTCTTCTATATATTCCTCAAGAAACTACTGCTGTTTTACTGGCCAGTAGTGAGGTTT TAAAAAATGTTGAATATATGTTACGACTGATTAGTTGAGGGTGGTATAATTATTAATTTGCGTCAACTGCAGGTTGCATTTAGGACTAAGGTATTCCACC CAAACATCAACAGTAATGGTAGTATATGTCTTGACATTCTCAAGGAGCAGTGGAGCCCAGCATTAACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77697; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_6457
| Blastp | Ubiquitin-conjugating enzyme E2-17 kDa from Lycopersicon with 78.41% of identity |
|---|---|
| Blastx | Ubiquitin-conjugating enzyme E2-17 kDa from Lycopersicon with 78.41% of identity |
| Eggnog | ubiquitin-conjugating enzyme(COG5078) |
| Kegg | Link to kegg annotations (100301932) |
| CantataDB | Link to cantataDB annotations (CNT0002539) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_003519294.1) |
| Pfam | Ubiquitin-conjugating enzyme (PF00179.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |