| Id Trinity | FTRINITY_DN58512_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_6443 |
| Sequence | CAGGTAGTTGGGAGTTTGTCCTCTTAAGTGGGTTTTTTTTTGTTCAACTTGGATTCGTGAAACTCCAAAGTGATGAATAGATACTGAGTGTCGTAGATCG AAAGTAATGTTAGGAATATTGTTGTATGAAGTTGGAGAATGGATTTTTTTGGTTTTTTGTTTTTTTATCTAGCTAATTTTATGGCATGTGGGTTTTCAGG TATGAGCAGTGTAAGCAAGAAGGGAAGCTCCTAGAGGGCGGAGATTTGGACTTCGCTTATGATAGCATTTCAGCCTTCTCTGATAGGAGAGACAATCAAG AAGCTGTTTTTGGTGCTGAGGAAGGATTGAAGGAGATAAAGGATGCAACTCAGGCATATAAAGCTGAAGCTTCAGACTTGCAAAGACAGCTAAGGCATCT GCAATCTCAGTTTGATATGCTTTCAAGCCAGGCATCAACTTTGACCCAAGGGAGGCGATCACGTGTTGGTGCAACATCTATTGTAAACGGGCACCTCACA ACGATAGATGATAGTCTCTCAGTGAGAAACTTACAGATGAATGCAGTTCTTGGAAGAATTGCTTCCACGACACAAGAGTTGGCACATTATCATTCAGGAG ATGAAAATGGTATATATTTGGCATACTCGGACTTCAGCCAATACTTGCTTGGAGACTCATCATGTCTAAAAGAGCTAAATCAGTGGTTTGCTAAGCAATT GGACACAGGTCCATTCCGACTTGTTGCTGAGGAGGGAAAATCTAAATGCTCTTGGGTGAGTCTTGACGACGCCTCAAATATCTACGTTAGAGATGTAGAA AAATCACATCATCAACGTGTGTCTGAGTTGCAACGGCTTCGCTCAATATTTGGAATAAGTGAAAGGCAATGGGTGGAAGCGCAAGTTGAGAATGCCAAGC AGCAGGCCATTCTAATGACACTTAAATCACAAGTATCGTCAGATGAAGCTCACATTCATCTCGATCTTCATTCTCTTAGGAGGAAGCATTCTGAATTGAA AGGAGAACTTTCAAATCTGTATAGCCGTGAAGAAAAGTTGCTAGCAGAGACTATTCCAGATTTGTGCTGGGAGCTAGCTCAACTCCAAGACACATACATT TTGCAAGGTGATTATGACTTGAAGGTCATGCGACAAGAGTATTATATCAACCGGCAAAAAGCTTTCATAAACCATCTCATCAATCTGCTTGCAAGGCATC AGTTGTTAAAGATAGCCTGTCATTTGGAGAAGAAGCAAATGCTCGGAGCATATTCTTTGCTTAAAGTTATTGAGTCTGAGCTGCAGGCGTACTTGACCGC AACAGAGGGGCGAGTGGGTCGTTGCCTGGCCCTTATTCAAGCTGCATCTGATGTTCCGGAACAAGGGGGAGTACATGACAGTGATCATTTTTTACACGCC ATCAGAGACCTGCTAAAAGTTTATTCAAATACTCAAGCTGCATTATCAACATATGTGTCCGCGCCAGGAATCGTCCAACAGATATCGGCTCTTCATTCAG ACCTGACGACTCTTCAGTCAGAACTTGAGAATTCTCTTCCAGAAGACAGAAATAGGTGTATTAATGAACTGTGCACTCTTATTCAAAGTCTGCAGCAACT GCTCTTTGCATCTTCTACAACAGCGCAGCCGATACTGACCCCTCGGCCATTGATGAAAGAGCTTGATGAAATGGAAAAGATTAATGCAAAACTCTCTGCT GCTGTAGAAGAGGTGACATTAGAGCATGTCAAGAAGAATGAGATTGTGAAACATCATTCACAAGAGATTGGACTTCAAAGGAGAGTTTTTGTTGATTTCT TTTGCAATCCTGAAAGATTGAGGAGCCAAGTTAGGGAGCTAACTGCTCGTGTCAGAGCCTTGCAAATTTCATAGCAATCATAACTTTTCTTCTGTATTTT CTGTGTGCTTATTTTAATATTTCCCGTATGTTCCGAACATGTTATTAATATCATATCGGTCATTAAACTGATACAGGAATCGATTCGCCATAGTACATGT TTCTGTCAATTTCCTACTGTGATATTTCATTGTTTTAAATGATTATGATCAATGTGTGATATTCCGAATCCTCATTCCTAATGGAATCGAAATGATCCCT GGATTGATCAGAAGATCCTTTCAATTGGCTAGAATCCGTTACTTGAATGAAACTAGATCTCGTAGAATCATATTGAATATTTGATGATACATTCCGTACA ATATTTTTATCTTCATTCGAATTACAAATAAAAAACGCGGGAATGTATTTAATTTATATATTATATATATGGGCTCTATCATTTGTAATAGAACTTACGC TTGATAGAAATATTATTATCATATAGAGTTTGACGGATGGGGTGAAGCTGAGTTCATTAAAGACGAAAAATGGCAAAAAATAAAGCACTCATTCCCCTTC TATATCTTACATCTATCGTTTTTTTGCCCTGGTGCATCTCTTTCATATTTAATAAAATTCTGGAATCTTGGATTACTAATTGGTGGAATACTAGGCAATC TGAAAATTTCTTGAATATCATTCAAGAAAAGAGTATTCTAAAAAAATTAATAGAATTCGAGGAACTGTTTCTCTTGGATGAAATGCTAAAGGAATACCCG GAAACACGTCTACAAAACCTTCGTACCGCAATCTATAAAGAAACCATCCAATTGATCAAGACGCACAACGAAGATCGTATCCATACGATTTTGCACTTCT CGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTAGGTAATCAAGAACTTATTATTCTGAATTCTTGGGTTCAAGAATTCGTATATAA CTTAAGTGACACAATAAAAGCTTTTTCGATTCTTTTATTAACCGATTTATGTATAGGATTCCATTCGACCCATGGTTGGGAACTAATGATTGGTTCTGTC TATAAAGATTTTGGCTTTGCTCAGAATGATCAAATTATATCTGGTCTTGTTTCCACTTTTCCAGTAATTTTAGATACAATTTTAAAATATTTGATTTTCC GTTATTTAAATCGAGTATCTCCGTCACTTGTAGTGATTTATCACTCAATGAATGACTGAAAAAACGATCCACTAATACAATTATAAAGTTTGTTATTTTG TATCAAAGCTAAATTGACTTATTCTTATTCCAGGAAAATTTTTTCAGTAAATAGCAGAATCATGGACAGGGAACTATGCCAGTGACCTACCTAATTTTAT TGTAGAAATTTTCAGGATCAATGATTGGACCATGCAAACTAGAAATGCCTTCTCTTGGATAAAGGAAGAAATTATTCGATCAATTTCCGTATCGCTCATG ATATATATAATAACTCGAGCACCTATTTCAAATGCATATCCCATTTTTGCACAGCAGGGTTATGAAAATCCGCGAGAAGCAACTGGCCGTATTGTATGTG CCAATTGCCATTTAGCTAATAAAGCCGTGGATATTGAGGTTCCACAAGCGATACTTCCTGATACTGTATTTGAAGCGGTTGTTCGAATTCCTTATGATAT GCAAGTGAAACAGGTTCTTGCTAATGGTAAAAAGGGGGCTTTGAATGTAGGGGCTGTTCTTATTTTACCGGAGGGTTTTGAATTGGCCCCACCCGATCGT ATTTCTCCCGAGATTAAAGAAAAGATAGGTAATCTGTCTTTTCAAAGCTACCGTCCCACAAAAAAAAATATTCTTGTGATAGGCCCTGTTCCGGGTCAGA AATATAGTGAAATAACCTTTCCTATCCTTTCCCCAGATCCTGCTACTAAGAGAGATGTTCACTTCTTAAAATATCCTATATACGTAGGCGGGAACAGGGG GAGGGGTCAGATTTATCCCGATGGGAGCAAGAGTAATAATAATGTTTATAATGCTACAGCAGCTGGTATAGTAAACAAAATCATACGAAAAGAAAAGGGC GGATACGAAATAATTATAGTGGATGCATCGGATGGGCGTGACGTAATTGATATTATACCTCCAGGACCAGAACTTCTTGTTTCAGAGGGTGAACCTATCA AACTCGATCAACCTTTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGGGATGCGGAAATAGTACTTCAAGATCCATTACGTGTCCAAGGTCTCTT GTTCTTCTTGGCATCTATTACTTTGGCACAAATTTTTTTGGTTCTTAAAAAGAAACAATTTGAGAAGGTTCAATTGTCTGAAATGAATTTCTAGGTCCGC GGATTTATCAGCATATTACCCTCGTCAAAATAACTCCATTTTTTGTTTATAAATTTGTGAATTCTATTCTGTATAATCAAAAAATTATGAAAAGTCCTTT CTTTGTGCTGCTTTCTAGTCTTTTTCTACGATATTTAGAGAATTCCTTATACCGCACTATTTGACTTTGTTGTTTCTTTTTTTTCAACCCCAAAAAATGA GAACGGTATTATTATATTAGGGTCACTGTTTTCAGATTTCAATGTCCTAGAATAGAAATCTATTAATAGATTTCTATTCTAATATACGAAAATTCGACTT GATAAAAAATAAATAAATAATATAGGCAGAGCATATTAAGCACAGTAGAATTCGAAATGGGGAAAACGGGATTCTAGGATGGATTATTTGTCTTTTCCTA GAGTCCGATTCATTCTTGCTTGTATCGAAATGGAAATATTCTACAAAATTTTAAGAAAATAATACTTCTGGATCCCCTTCCTAAAAGAATCCTATTCTTA GTTTCTATTTTTTCCAACTTAGAACTTTTATGTTTATGACATATAATATGTGGTGGAGTAGTGGACAAACAAAAAAAAGAGAGGGAATTTTATTGACCAA ATACAAAACGTCTTCAATTAACTTGTTTAGAAAAAAGAATTCAATCATGATTCGATACTATTAGATACTCAAATAAAATCGATTTAGAGTAAGATTCTAT TAGGATACTTAAAAAAGGTTCGGTTCACATGATATTTGATCGATAAATATATAGAATATAATTAAGAATGTATTCCAATATAATACAATAGAATTCATTA TATTTCTATTGCACCACCCAGAAAAAGTAAATCAAGCGATTCCTTTTATTCTTTCTTTTTTTTTACTTTATCTTTCTTTCAATTTAAAATAAAAATAAAA AGTATTGACAGATATTATTCCGTAAAAGATGTTTTGAATCAATTAATGAAGTTTATTTTTTAAAAACATCATCAAAAACAATGAAATAAATGGAGTTTTT TTTTTTTAATCGCAAAAAGCAATCTAATATCTAGTGAGTCATTTGTACGAAGAAAAAAGATTTTAATTATTAAGAACTCAACGGGACCCCCTCGAATTTG TCAAAGAAAGGGTGGATCCCTGTTGAGTTCTTACGCTTTCATTTCGAAAACTCAATGCATCCAATTACTACAGGGATGAGCCCAATCCGGAATATGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77698; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_6443
| Blastp | AUGMIN subunit 3 from Arabidopsis with 78.1% of identity |
|---|---|
| Blastx | AUGMIN subunit 3 from Arabidopsis with 78.1% of identity |
| Eggnog | HAUS augmin-like complex subunit 3(ENOG4111N2F) |
| Kegg | Link to kegg annotations (AT5G48520) |
| CantataDB | Link to cantataDB annotations (CNT0000355) |
| Mirbase | hbr-MIR6483 (MI0022062) |
| Ncbi protein | Link to NCBI protein (XP_019461857.1) |
| Pfam | HAUS augmin-like complex subunit 3 (PF14932.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |