Ll_transcript_6445

• Id Trinity: FTRINITY_DN58512_c1_g2_i3
• Name Transcript: Ll_transcript_6445
• Sequence: CTCATCCAGATCCTCTATTCCTCTCTCACAAACCCGCCACCCTCTTCCACCAACCGGCAACCACCGTTGACCGCCGTCACCGTTGTCTCTGAGCCACCAC CCATTTGTTCAGCAAAACGAATAAATGTAAGAGAGTGAAAACAATAAACAATGAGTGGTGGTCGATTATGCAGTTTACTCGCTGAATTGGGGTACCAAGG TGCAGATACATTAGACCCAGATAGTTTTGAATGGCCTTTTCAATACCAAGATACTCGTCCTATTCTTCATTGGATCTCTTCTACTCTTCGTTCTTCCAAT ATTCTCTCTTTCTCTGAACTTTCCCAGTATGAGCAGTTTAAGCAAGAAGGGAAGCTCCTAGAGGGCGGAGATTTGGACTTCGCTTATGATAGCATTTCAG CCTTCTCTGATAGGAGAGACAATCAAGAAGCTGTTTTTGGTGCTGAGGAAGGATTGAAGGAGATAAAGGATGCAACTCAGGCATATAAAGCTGAAGCTTC AGACTTGCAAAGACAGCTAAGGCATCTGCAATCTCAGTTTGATATGCTTTCAAGCCAGGCATCAACTTTGACCCAAGGGAGGCGATCACGTGTTGGTGCA ACATCTATTGTAAACGGGCACCTCACAACGATAGATGATAGTCTCTCAGTGAGAAACTTACAGATGAATGCAGTTCTTGGAAGAATTGCTTCCACGACAC AAGAGTTGGCACATTATCATTCAGGAGATGAAAATGGTATATATTTGGCATACTCGGACTTCAGCCAATACTTGCTTGGAGACTCATCATGTCTAAAAGA GCTAAATCAGTGGTTTGCTAAGCAATTGGACACAGGTCCATTCCGACTTGTTGCTGAGGAGGGAAAATCTAAATGCTCTTGGGTGAGTCTTGACGACGCC TCAAATATCTACGTTAGAGATGTAGAAAAATCACATCATCAACGTGTGTCTGAGTTGCAACGGCTTCGCTCAATATTTGGAATAAGTGAAAGGCAATGGG TGGAAGCGCAAGTTGAGAATGCCAAGCAGCAGGCCATTCTAATGACACTTAAATCACAAGTATCGTCAGATGAAGCTCACATTCATCTCGATCTTCATTC TCTTAGGAGGAAGCATTCTGAATTGAAAGGAGAACTTTCAAATCTGTATAGCCGTGAAGAAAAGTTGCTAGCAGAGACTATTCCAGATTTGTGCTGGGAG CTAGCTCAACTCCAAGACACATACATTTTGCAAGGTGATTATGACTTGAAGGTCATGCGACAAGAGTATTATATCAACCGGCAAAAAGCTTTCATAAACC ATCTCATCAATCTGCTTGCAAGGCATCAGTTGTTAAAGATAGCCTGTCATTTGGAGAAGAAGCAAATGCTCGGAGCATATTCTTTGCTTAAAGTTATTGA GTCTGAGCTGCAGGCGTACTTGACCGCAACAGAGGGGCGAGTGGGTCGTTGCCTGGCCCTTATTCAAGCTGCATCTGATGTTCCGGAACAAGGGGGAGTA CATGACAGTGATCATTTTTTACACGCCATCAGAGACCTGCTAAAAGTTTATTCAAATACTCAAGCTGCATTATCAACATATGTGTCCGCGCCAGGAATCG TCCAACAGATATCGGCTCTTCATTCAGACCTGACGACTCTTCAGTCAGAACTTGAGAATTCTCTTCCAGAAGACAGAAATAGGTGTATTAATGAACTGTG CACTCTTATTCAAAGTCTGCAGCAACTGCTCTTTGCATCTTCTACAACAGCGCAGCCGATACTGACCCCTCGGCCATTGATGAAAGAGCTTGATGAAATG GAAAAGATTAATGCAAAACTCTCTGCTGCTGTAGAAGAGGTGACATTAGAGCATGTCAAGAAGAATGAGATTGTGAAACATCATTCACAAGAGATTGGAC TTCAAAGGAGAGTTTTTGTTGATTTCTTTTGCAATCCTGAAAGATTGAGGAGCCAAGTTAGGGAGCTAACTGCTCGTGTCAGAGCCTTGCAAATTTCATA GCAATCATAACTTTTCTTCTGTATTTTCTGTGTGCTTATTTTAATATTTCCCGTATGTTCCGAACATGTTATTAATATCATATCGGTCATTAAACTGATA CAGGAATCGATTCGCCATAGTACATGTTTCTGTCAATTTCCTACTGTGATATTTCATTGTTTTAAATGATTATGATCAATGTGTGATATTCCGAATCCTC ATTCCTAATGGAATCGAAATGATCCCTGGATTGATCAGAAGATCCTTTCAATTGGCTAGAATCCGTTACTTGAATGAAACTAGATCTCGTAGAATCATAT TGAATATTTGATGATACATTCCGTACAATATTTTTATCTTCATTCGAATTACAAATAAAAAACGCGGGAATGTATTTAATTTATATATTATATATATGGG CTCTATCATTTGTAATAGAACTTACGCTTGATAGAAATATTATTATCATATAGAGTTTGACGGATGGGGTGAAGCTGAGTTCATTAAAGACGAAAAATGG CAAAAAATAAAGCACTCATTCCCCTTCTATATCTTACATCTATCGTTTTTTTGCCCTGGTGCATCTCTTTCATATTTAATAAAATTCTGGAATCTTGGAT TACTAATTGGTGGAATACTAGGCAATCTGAAAATTTCTTGAATATCATTCAAGAAAAGAGTATTCTAAAAAAATTAATAGAATTCGAGGAACTGTTTCTC TTGGATGAAATGCTAAAGGAATACCCGGAAACACGTCTACAAAACCTTCGTACCGCAATCTATAAAGAAACCATCCAATTGATCAAGACGCACAACGAAG ATCGTATCCATACGATTTTGCACTTCTCGACAAATATAATCTGTTTCGTTATTCTAAGTGGTTATTCTATTCTAGGTAATCAAGAACTTATTATTCTGAA TTCTTGGGTTCAAGAATTCGTATATAACTTAAGTGACACAATAAAAGCTTTTTCGATTCTTTTATTAACCGATTTATGTATAGGATTCCATTCGACCCAT GGTTGGGAACTAATGATTGGTTCTGTCTATAAAGATTTTGGCTTTGCTCAGAATGATCAAATTATATCTGGTCTTGTTTCCACTTTTCCAGTAATTTTAG ATACAATTTTAAAATATTTGATTTTCCGTTATTTAAATCGAGTATCTCCGTCACTTGTAGTGATTTATCACTCAATGAATGACTGAAAAAACGATCCACT AATACAATTATAAAGTTTGTTATTTTGTATCAAAGCTAAATTGACTTATTCTTATTCCAGGAAAATTTTTTCAGTAAATAGCAGAATCATGGACAGGGAA CTATGCCAGTGACCTACCTAATTTTATTGTAGAAATTTTCAGGATCAATGATTGGACCATGCAAACTAGAAATGCCTTCTCTTGGATAAAGGAAGAAATT ATTCGATCAATTTCCGTATCGCTCATGATATATATAATAACTCGAGCACCTATTTCAAATGCATATCCCATTTTTGCACAGCAGGGTTATGAAAATCCGC GAGAAGCAACTGGCCGTATTGTATGTGCCAATTGCCATTTAGCTAATAAAGCCGTGGATATTGAGGTTCCACAAGCGATACTTCCTGATACTGTATTTGA AGCGGTTGTTCGAATTCCTTATGATATGCAAGTGAAACAGGTTCTTGCTAATGGTAAAAAGGGGGCTTTGAATGTAGGGGCTGTTCTTATTTTACCGGAG GGTTTTGAATTGGCCCCACCCGATCGTATTTCTCCCGAGATTAAAGAAAAGATAGGTAATCTGTCTTTTCAAAGCTACCGTCCCACAAAAAAAAATATTC TTGTGATAGGCCCTGTTCCGGGTCAGAAATATAGTGAAATAACCTTTCCTATCCTTTCCCCAGATCCTGCTACTAAGAGAGATGTTCACTTCTTAAAATA TCCTATATACGTAGGCGGGAACAGGGGGAGGGGTCAGATTTATCCCGATGGGAGCAAGAGTAATAATAATGTTTATAATGCTACAGCAGCTGGTATAGTA AACAAAATCATACGAAAAGAAAAGGGCGGATACGAAATAATTATAGTGGATGCATCGGATGGGCGTGACGTAATTGATATTATACCTCCAGGACCAGAAC TTCTTGTTTCAGAGGGTGAACCTATCAAACTCGATCAACCTTTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGGGATGCGGAAATAGTACTTCA AGATCCATTACGTGTCCAAGGTCTCTTGTTCTTCTTGGCATCTATTACTTTGGCACAAATTTTTTTGGTTCTTAAAAAGAAACAATTTGAGAAGGTTCAA TTGTCTGAAATGAATTTCTAGGTCCGCGGATTTATCAGCATATTACCCTCGTCAAAATAACTCCATTTTTTGTTTATAAATTTGTGAATTCTATTCTGTA TAATCAAAAAATTATGAAAAGTCCTTTCTTTGTGCTGCTTTCTAGTCTTTTTCTACGATATTTAGAGAATTCCTTATACCGCACTATTTGACTTTGTTGT TTCTTTTTTTTCAACCCCAAAAAATGAGAACGGTATTATTATATTAGGGTCACTGTTTTCAGATTTCAATGTCCTAGAATAGAAATCTATTAATAGATTT CTATTCTAATATACGAAAATTCGACTTGATAAAAAATAAATAAATAATATAGGCAGAGCATATTAAGCACAGTAGAATTCGAAATGGGGAAAACGGGATT CTAGGATGGATTATTTGTCTTTTCCTAGAGTCCGATTCATTCTTGCTTGTATCGAAATGGAAATATTCTACAAAATTTTAAGAAAATAATACTTCTGGAT CCCCTTCCTAAAAGAATCCTATTCTTAGTTTCTATTTTTTCCAACTTAGAACTTTTATGTTTATGACATATAATATGTGGTGGAGTAGTGGACAAACAAA AAAAAGAGAGGGAATTTTATTGACCAAATACAAAACGTCTTCAATTAACTTGTTTAGAAAAAAGAATTCAATCATGATTCGATACTATTAGATACTCAAA TAAAATCGATTTAGAGTAAGATTCTATTAGGATACTTAAAAAAGGTTCGGTTCACATGATATTTGATCGATAAATATATAGAATATAATTAAGAATGTAT TCCAATATAATACAATAGAATTCATTATATTTCTATTGCACCACCCAGAAAAAGTAAATCAAGCGATTCCTTTTATTCTTTCTTTTTTTTTACTTTATCT TTCTTTCAATTTAAAATAAAAATAAAAAGTATTGACAGATATTATTCCGTAAAAGATGTTTTGAATCAATTAATGAAGTTTATTTTTTAAAAACATCATC AAAAACAATGAAATAAATGGAGTTTTTTTTTTTTAATCGCAAAAAGCAATCTAATATCTAGTGAGTCATTTGTACGAAGAAAAAAGATTTTAATTATTAA GAACTCAACGGGACCCCCTCGAATTTGTCAAAGAAAGGGTGGATCCCTGTTGAGTTCTTACGCTTTCATTTCGAAAACTCAATGCATCCAATTACTACAG GGATGAGCCCAATCCGGAATATGAAC
• Tissue: flowers
• Gene name: LI_gene_77698;
• Additional information: details;

Expression of Ll_transcript_6445

FPKM

• FPAB: 0.2
• FPNAB: 0
• LF1: 0.2
• LF2: 1.2
• LF3: 0.6
• LF4: 0.7
• UF1: 0.8
• UF2: 0
• UF3: 0.2
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_6445

• Blastp: AUGMIN subunit 3 from Arabidopsis with 77.76% of identity
• Blastx: AUGMIN subunit 3 from Arabidopsis with 77.76% of identity
• Eggnog: HAUS augmin-like complex subunit 3(ENOG4111N2F)
• Kegg: Link to kegg annotations (AT5G48520)
• CantataDB: Link to cantataDB annotations (CNT0000355)
• Mirbase: hbr-MIR6483 (MI0022062)
• Ncbi protein: Link to NCBI protein (XP_019461857.1)
• Pfam: HAUS augmin-like complex subunit 3 (PF14932.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;