Id Trinity | FTRINITY_DN58512_c1_g4_i2 |
---|---|
Name Transcript | Ll_transcript_6452 |
Sequence | TTCTAAACCAATCACAAAGCCATCCCAATGACGAGCACATCTTATATCACTCGTCCTAATTGACATCCTTAATAATGTAAAATTGACCGTATACAAGTAT ATGTACCTCTCAAAGCGTATGGCGTTAATGCTACGCTAATACGAATACTGAGAACCTTCTAGAAACAACTTCTTACCCCTTCCCCGATTTTAATTTTTGC CTATTTTATTCTCATTCTTCTTCGATCAAAAGGGCTTTTGAAATTTCAACCTTTTCTCTATCTCTCTAACCCTATTTTCGCACATTCGTTCTCCAAATTC TCCTCTTTCTGTAACCCTTTCAGGTTGAGTATGGCATCGAAACGCATCTTGAAGGAACTCAAGGATTTGCAGAAGGACCCTCCTACATCGTGCAGTGCTG GTCCCGTTGCCGAGGACATGTTTCATTGGCAAGCAACAATCATGGGGCCATCTGACAGCCCTTACACAGGTGGTGTATTCCTTGTTTCGATTCATTTCCC ACCGGACTATCCTTTCAAGCCACCAAAGGTAAATATCATACATTGTTACTTACATCAATTGCTTGTAGCTTATGCGCTTTTGATGTTGTGATTATGTTGA GACTTGTTTGGCGGGTATTCACATTGTCTGGTAACAAGTTTTCACCTTCCTGTGTTTGGATTTTACAATCTGAAGTTGCACCTTTGTTTATCATTTTGCA TTATAACAAATGTGTTCATGTGAGGAAATTTTATGATGTACAACCCATGTGATAGGTGTGGTCAGCCTCCTCCAATCCTCAATGGTAATTTGTGGTGTTG GTCTGAGCTAGATTCTTGTAAACCTTAAACACAACCTGAACTATTTTATTTTTTGATGAAAAAGAAATATTAGTACAAAAGAAGAAAGTATATTTTTTAA TGAACAATTGGTTGGTTGAACTGTTTGCACTATCCAAAACAGTTCTTCTAGTGTCCTTGTCTGTTTCTAGATTGTATGATTGTATCATGGACCCGTTCCT TGCTAAACTAGCCCTACTCTACCTACACAGCGTGTCAGTATCCGTTTTTTAGAGCATTGGTCTAGAAAGGCAATATGAATGACATTCATAATTGATGCAA ATTCAAGAATGTTTTGGCAGTGGATGCAGCACTCTATAAAGATGGAATTAAGTGATAAATTTGGAGATAAAAAATTTAACCCCCTGTCTCGATGCCAGAA AATCATCTTTCCTCACTGCCTTGGTGATTGAGACTACCACCTTTATTAACACTAGTGTGTAGTAACTGATACTCACAGTTCCTCTTTCTATGAACACTGG TGTACACTAGCACTGTTCCAGGAAGAGAGTCTTTTCTTTATCTATTCTTGCTGCTTCAGTTCACCTATGTACACACAGAGAGCATAATTAGTAAAAAACA ATGTGAGAAAGAAAGCTGCATTGCTTATAGCAATATTAGATGCTTGGTTGTGTGGATGACATCACTCGTTTCACTGTTATATGTTAAGTGTATATGAATT TGCTTTTCTTTTGTGTATATTTCATTTTCCTCATTTATCCTCATCCATTCTTACTGTTTTTACTTTTGAGGTGATTTGATAAAAAAATTCGATCCAATTA CAGTAGAATTACTTATTTTAATATGTTTGTAAGATATTAATGCTTTTGTACTGGATGGTACTTAAGTTTGTAAATATCTTGAACTTCTCTCAAGACTAGT TGTTTAGAAACTGATAATTTGGCATCTCTAATAATGCAGGTTGCATTTAGGACTAAGGTATTCCATCCAAACATCAACAGCACTGGGAGTATATGTCTTG ATATTCTTAAAGAACAGTGGAGCCCAGCACTAACAATTTCCAAGGTCCTTTTGTCAATTTGCTCACTGTTGACAGATCCTAACCCTGATG BLAST |
Tissue | flowers |
Gene name | LI_gene_77700; |
Additional information | - |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_6452
Blastp | - |
---|---|
Blastx | Ubiquitin-conjugating enzyme E2 28 from Arabidopsis with 97.01% of identity |
Eggnog | ubiquitin-conjugating enzyme(COG5078) |
Kegg | Link to kegg annotations (AT1G64230) |
CantataDB | Link to cantataDB annotations (CNT0002933) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019420122.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |