Id Trinity | FTRINITY_DN58513_c0_g1_i25 |
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Name Transcript | Ll_transcript_8014 |
Sequence | GGTTGCTGATTAAAGTTAGTTAGCTATGTGTCTCAAGTTGATTTCTTCTTTTGTCCTTTGTGTTTCTTTGAATGCAATTTGATCAGCACTAGTTAGGAAG GTCCAAGATATGTTCTACAATTATCTATATGGACTAAACAAATTTCTGCTTCAGTATCAAATTATCCCGATGCCCTTTGTACAACTAAATATCTGTGTGC TTTGTCTCAAGGAATCAACAACTCATTCAGTCAGGCAATGCCACAGTGGCCAACTTCTAGTCATGACAATAGAACTGACGGTCAAAATCAAGAGTCTAAA ACTGCGCAGCAGCAAGAGCAACCTCCGTCTGAGGTGGAGCTGAAGCAACATGTATCTCTTCCTGAACAACCCCAACATGTTGCTTCACAAGTTGTAAATA ATCCTCCCTTTTCACAGAAACAATCTCAAGATGAATTTCACCAATCGCAGAATGTACAAGTTTCCGTCCAAAATTCTCAAATGATTGGAATTCAAAATTC TGGAAAAGATCCTGTCCATAATCACGAGATAGTCCAAACACATAACCCCAGTAATGAATCTCAGTATGCGAAGTTGCAGCAGATCAGTAATCAACAGGAT ACCATTACTGAGCAGCCAAGAAGCCAAATGTACCGGCCTATTAAACAGGTACCATTTGGCCTGTTGCTACCCATCTTGATTCCCCAACTTCCCAAAGATA GAGCCATGCAACTGCAAACTCTATTTACTAAATTGAAGAAAGATGAGGTTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGAT GCTTAGATTAGCATTAGCAAAAGTGCAACAGGCAAGGCCCAACCAAGGTCCTGCTGGCCAGCAACCTGCTGTAAGGATGCCAACTGTTGGTTCAGGTGCA AGACAATTTAATGATCCCCATGCTTTAGCACAACTTCATCAGAGAAGTATGGATGCTACTGCAGACCAATCTCGTATGACATCATCCGCTGTCCATAATG TGGGGAGCAATGCTAGAATGTCTCAGGAATTGGATGCTAAAATAGAATCGCAAGGATTGCAAACAAGCCATTTACCAACTTCCAGTTCCAACGTTGGTAG ACAAGAAACAGAAAGGTCATCAGTTCACGTACAAGGGCTTAATAAGCAGCAGCAGCAACATCTACATTTCTCTTCTGCATATGGAAGTACTGGTGGTAAT TATAACCCTTTTTCTGGAACAACCACTAGTTCCACTTCATCTATCAAACCACAACCGCTTGATTCACACTTGGGTCAAACTCCACATCAAAACACTGGTC GAAATCACATAGGTGGGGTACCACAAGGTTTGAATGTCACTAGTATGCCAAAACTCGAACGAGATAATTCTTTCAGTGATCCCAAGAGGCTACCTGGTGG ATCTGTGTCGTCTGTGGTAAATAATACAGCACCCCAGCAAACTTCGAATGCTTGGAAACCGTCAATAAACAAAGAACAAAATGTGAGCTTGTTGTCATCT GTTTCATATGTAAAAAAAGAACCTAGTGACCCATCTACTGAGCAGCAACATAGGCTTAATTTGTCTAAATTGCATGGCTTCCCTTCTGTTAATTCTTCAC AGATTGAACATGGTAGTTCTAATCAAGTAATTGTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCCTCCACAAGCATGCCACCAACAACATCTACAGGCCT GCCACCACACAATTCTGCTTCCCCTTCTGTAATGACCCAACCAGACCCTAGTGTCTCAATCCCATCAAGCACTTCTGGGATTATGGCAAGGACACCTGTG AAAAAGCCTTTTCCTGCCCAGAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCAAGTAAGAAACAAAAGACATCTGGGGGATCTGTAGAAC AAAGCATTGAACAACTTAATGATGTCACTGCTGTTAGTGGAGTTGATCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCTAAGGATGACAGTCGAGT TTCAGAAGCATCTCGAAGAGCTGTGCAAGAAGAAGAGGAAAGGCTGATTTTGCAGAGAACTCAATTGAATAAAAAATTGGTTGAGATTTTGGTCAAGTAT GGCTTGAAGGGTATTGGCAATGATGTAGAGAGATGCTTGTCACAGTGTGTGGAGGAAAGGATGCGGGGACTAATAAGTAACCTGATTAGACTGTCAAAAC AGCGGGTTGATTTTGAGAAGAC BLAST |
Tissue | flowers |
Gene name | LI_gene_77707; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_8014
Blastp | Transcription initiation factor TFIID subunit 4b from Arabidopsis with 42.17% of identity |
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Blastx | Transcription initiation factor TFIID subunit 4b from Arabidopsis with 41.73% of identity |
Eggnog | RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410XQS6) |
Kegg | Link to kegg annotations (AT5G43130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431852.1) |
Pfam | RCD1-SRO-TAF4 (RST) plant domain (PF12174.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |