| Id Trinity | FTRINITY_DN58513_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_7988 |
| Sequence | CTTCCTCCAACCCCTTCACCATCATCTTCACATTCTTCACTTTCTTCATCTTCACTATTTGAGCCAACCCAATTAAAACGCTAACAAACTCTTCAACAAG ATTCATTTTTCAATGTGTATATGATATTGGTGTTGCTTTTGCTAATGACAAAGATGGTGAGGATGATGGTACAAGGAAGTGGTTACAAGTTGAGAAAAAA TATGTTGCCATATTATATTTCTTTTTTTCTTTTCCTTGTTTTGCTGTATTTTGTTGTTCCTTAAAATCCAAAAGACAGGGCAATTTGAAACCTTTTGAGT ACACTGATATTTTCATGTAGTACGGTGGCGAAAATGTTAAAGTTTTTTCCTTTTTCTTTTTAGCTTAAAGTTTAAACTTAGTTAGCAGAAGCACATCTAC GGATATTATTTCTAAACTTCATAAAATACATACTATATAAATTTGATAAGTTATTTAACTAAAGAGTTATAGTAGGATAGGGGTTTTCATTGTGGTCTTA CGTAGTAAAGCTTGTTGGTTCGATATCACAAATTTTAATATAATAAAGAAGTACTAATAAAAAATATTTTAAAATAAATTATAGCAAAAAGTATTACAAA TATTTTTACTTTTTCTTTAGATATTTATTAAAACAATGTTTTAAAAAAATTCTAATATAAATGCATTAAATAATATTTTTAAAAAAATTAATTTTTTGTA TGGGAACGACAAAAAGACTAAATTTTTATGGGACTAAAATGATATTTAATATTTAATAGAAACTAATATGATAGATACCAAATTTGTTGGGGAATAAAAT GGTGTTTACTTCTTTTTTTAATTATGAAACCAACAAATATGCTTTCGTAACCCTTCATGTGCCATTATATGTTATTGGTTAAAAAAAATATTTAAATTAA AAAAAATAATTATTAATCATATTATGACCAATCATAAATGGTGGTGGTACATAGAGTGAACTTATGTGGGAGAGAAGATGTCCCCCGAACCAAACAGACA CATGATCTGTATCATTTAGTTTCATCCTCACCTTTGTATATTCTACAATTTCTTAAGGTTTATAAATAAACTTCGAAATCCTCAATAAGAAGAATCTCTC GTTAATCATCCTTTACCTTCTTTTATTTCGCTCTCGAATCCTGTTATTGGATAATTCTTTTTGTTCTCGTTTGATTGGTACCTCAACAGCGCCACCGGTT TTCCAATTCCTGTTATTCCTCTCTCTTGGATCATTCAAGACAAACATTGTTTTGAAATTGATATGGACCCGTCTATTGTGAAGCTACTGGAAGATGATGA GGACGAGACGATGCATTCTGGGGTGGACTTGGAAGCGTTCCAGGCTGCCTTAAATAGAGATATTGGAGGTGGTGCGTCTGCTTCTCAGCCTTCTGGTTCA GAGTCCGCTTTGTCTCAAGGAATCAACAACTCATTCAGTCAGGCAATGCCACAGTGGCCAACTTCTAGTCATGACAATAGAACTGACGGTCAAAATCAAG AGTCTAAAACTGCGCAGCAGCAAGAGCAACCTCCGTCTGAGGTGGAGCTGAAGCAACATGTATCTCTTCCTGAACAACCCCAACATGTTGCTTCACAAGT TGTAAATAATCCTCCCTTTTCACAGAAACAATCTCAAGATGAATTTCACCAATCGCAGAATGTACAAGTTTCCGTCCAAAATTCTCAAATGATTGGAATT CAAAATTCTGGAAAAGATCCTGTCCATAATCACGAGATAGTCCAAACACATAACCCCAGTAATGAATCTCAGTATGCGAAGTTGCAGCAGATCAGTAATC AACAGGATACCATTACTGAGCAGCCAAGAAGCCAAATGTACCGGCCTATTAAACAGGTACCATTTGGCCTGTTGCTACCCATCTTGATTCCCCAACTTCC CAAAGATAGAGCCATGCAACTGCAAACTCTATTTACTAAATTGAAGAAAGATGAGGTTCCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGG GACCAGATGCTTAGATTAGCATTAGCAAAAGTGCAACAGGCAAGGCCCAACCAAGGTCCTGCTGGCCAGCAACCTGCTGTAAGGATGCCAACTGTTGGTT CAGGTGCAAGACAATTTAATGATCCCCATGCTTTAGCACAACTTCATCAGAGAAGTATGGATGCTACTGCAGACCAATCTCGTATGACATCATCCGCTGT CCATAATGTGGGGAGCAATGCTAGAATGTCTCAGGAATTGGATGCTAAAATAGAATCGCAAGGATTGCAAACAAGCCATTTACCAACTTCCAGTTCCAAC GTTGGTAGACAAGAAACAGAAAGGTCATCAGTTCACGTACAAGGGCTTAATAAGCAGCAGCAGCAACATCTACATTTCTCTTCTGCATATGGAAGTACTG GTGGTAATTATAACCCTTTTTCTGGAACAACCACTAGTTCCACTTCATCTATCAAACCACAACCGCTTGATTCACACTTGGGTCAAACTCCACATCAAAA CACTGGTCGAAATCACATAGGTGGGGTACCACAAGGTTTGAATGTCACTAGTATGCCAAAACTCGAACGAGATAATTCTTTCAGTGATCCCAAGAGGCTA CCTGGTGGATCTGTGTCGTCTGTGGTAAATAATACAGCACCCCAGCAAACTTCGAATGCTTGGAAACCGTCAATAAACAAAGAACAAAATATTGAACATG GTAGTTCTAATCAAGTAATTGTAAAGGATGAGTTTTCAAGAGGTCTTCCAGCCTCCACAAGCATGCCACCAACAACATCTACAGGCCTGCCACCACACAA TTCTGCTTCCCCTTCTGTAATGACCCAACCAGACCCTAGTGTCTCAATCCCATCAAGCACTTCTGGGATTATGGCAAGGACACCTGTGAAAAAGCCTTTT CCTGCCCAGAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCAAGTAAGAAACAAAAGACATCTGGGGGATCTGTAGAACAAAGCATTGAAC AACTTAATGATGTCACTGCTGTTAGTGGAGTTGATCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCTAAGGATGACAGTCGAGTTTCAGAAGCATC TCGAAGAGCTGTGCAAGAAGAAGAGGAAAGGCTGATTTTGCAGAGAACTCAATTGAATAAAAAATTGGTTGAGATTTTGGTCAAGTATGGCTTGAAGGGT ATTGGCAATGATGTAGAGAGATGCTTGTCACAGTGTGTGGAGGAAAGGATGCGGGGACTAATAAGTAACCTGATTAGACTGTCAAAACAGCGGGTTGATT TTGAGAAGACAAGACACCAGACTGTTGTCACCTCAGATGTTCGGCAGCAAATCATGACAATAAATAGAAAATTAAGGGAAGAGTGGGAGAAAAAACAGGC AGAAGCAGAGAAGCTTCGAAAAAGTAATGATATCGAGAACAATACTGGAGTTGATGGTGACAAGGAGAAGGATGATGGTCGTAAATCAACAAAGGTGAAC AAGGAAGAGGATGAGAAGATGAGGACAAATGCTGCAAACGTTGCTGCCCGCGCTGCTGCTGGGGGAGATGATATGCTGTCGAAGTGGCAACTTATGGCCG AACAAGCCAGGCAGAAACGTGAAGGGGGGACAGACATGTCATCTGGCTCTCAATCAGCTAAAGATGTGAACCGCAAATCTTCATCAGCATCCGGAAGGAG TATGAAGGATAATCAAGAAGGGGATAAAAAAGGTCCAACTATTCCATCTTCAGGGACTTCTAGAAAAGATGGCAAAAATCATGCTCTTACATCTCAAACT AGGGTAGCTCGAAGCATCTCTGTCAAGGATGTAATTGGAGTCCTGGAGAGGGAACCCCAGATGTCCAAATCACCACTCATATATCGCTTGTATGAGAGAA TTCATTCTGATGCCCCAGCTGAACAAGGTTAAACTAAGCACCCAAGTGTTCTTAGTTCTGTATTTTTATTGCGTAAACTTTTTATTAACTTCCTTTTACC AACTGAAATGGAAAGGTTTCCTCAAACTGGGAAGTTTTCCTGTTAAATTTGATTTGCTCACGATCACTTGGTGAGGAGTTTGCTTGCCTTTTGTCCTTTA CTTATATTTAGAAAATTACAAAAAAATAGGTGTTGATCTTTTGATACCTGTGTTGTTTTTTTTTTGGGTGGAATATTTAGTATCTTTCTTAAACATGTCA TATATAGTTAAACTTTGATGTTAAACTGATTTTATGCTGTGAAATACAGTTGTAAGTGCTGCCTATAGAAAGTAGCATGATTATTTGGCCATGTCTCTCA AGTTTCATGCTTGAGGATGGTGCTTGCAATGACTACAACTTGTTCTCCCAATGACATAAAATGTTCTTTCAGTCTCCGAAATTGTTTGAAAAGTGTGATC AAAGCATGATGAACACTTTTTGATCTGCGTAGTCAGTGAATAAAGTCTCAACTAGTGAAGTTTATGGTGTGACCATGATGGAAATATTGACGTGCAACAA GCAAAAATAGTGCCTACAATTGAATCCTGGTAAATCTATTTTAGGCACCTAAAGAGAATTTCGCTGTATTTTGTGGGATACTTTTAGCACTGTCTAAAAT TATTCATTGTTTAATCTAATTATAGTTTCTTTTTCATTATATTTGAACGAGAGTATATATTCTCTCATAAGGTATATTATTCCACGTGTCATTCTATGTA ATTGGTCAGAACTTAATTTTTAAACTTTTAATTTAAATACAGTTATTTTTTTCAACCAATTACAATGAATAACATATAGAGCAACATTATAAGAGAGAAG ATCCTCCCTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77707; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7988
| Blastp | Transcription initiation factor TFIID subunit 4b from Arabidopsis with 45.49% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 4b from Arabidopsis with 45.45% of identity |
| Eggnog | RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410XQS6) |
| Kegg | Link to kegg annotations (AT5G43130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431854.1) |
| Pfam | RCD1-SRO-TAF4 (RST) plant domain (PF12174.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |