Ll_transcript_7690

• Id Trinity: FTRINITY_DN58524_c2_g1_i2
• Name Transcript: Ll_transcript_7690
• Sequence: ATTTTGTATATTTGTATATTTGTATATTTGTATGTGGTGTGGTGTCCGCAGCGCAGGAGGGTAAGGCAAGCTTACTAGCGTCTTATCCTGATGGCCATCA CTTTGTGTTATGTTTCTTCGCTCTCTCTCTGAATTCATTATTTGAATTTATCTCTCTCTCTCTCTCTCTCAGCCATGTCCTCGTGTTTATTGCCGGATAC TTTCACTTTCCGATACGCTCTTCTTCCATCAGCAACTTCATCCATAAAAAGCAGAGATTTTATTGCTTTCCAGCCCCATTGTGTTTTATCAACAACTCCT TCACCCACTGCTCTTACTTTGGAAAAATTGGCACTTTCATCATCATCATCCTCCTCATCATCATCATCCCCATATCTTCCTTCATCCACACAGGAAAACT TCAAAGCAACCTTATCTACACAATCACTCCTTACTAGTGAAGAAAATGTAATAGCTGCTGCTGCTTCTGAAGCTGTTGCTCTTGCTAAAGCAGCTTTGAA AGTTGCAAAGGTTGCTGCCCTACTTGTTAAAAACAAGTCCCCACCAGAAGCAGCATATACACCCCCACATGATTCTTCCAAATCTGATAATTTAATTCTT CTCAAATGGGTTCAACATTTGGAAGCACAAGAAGACGGTGTAGTATCTGATTCAGAAGAACATGTTTACAATGACATAAAAGAGGAGTCTGATGATACGG AACCCACCTATGAAGAACTTGAGCGTCTCAATCAGCAGCTCTCTGATAGTATAGCTGTAAGATCTACACGCCAAACAGAAAGAAAAGCTAAAAGAGTCAG AGCGGCAGAGAAGTCTGCCACACACATGGTTTCTTTTAAGTCCGGCTCAACCAGCAGGAAAAAGCGCGTTCCTACACAAGAAGTAGACTATTCTGATCCA CTTCGTTACCTAAGAGCAACGACTAGCACTTCTAGGCTTCTCACTCCATCAGAAGAAATTGAGTTGTCCGAAGGAATACAGGACCTACTAAAGCTTGAAA AACTCCAGGAGGATCTCACAGAAAGATGTGGTAGCCAGCCCACGTTTGCTCAATGGGCTGCAGTGGCAGGGGTAGATCAGAAGACCCTAAGGAAGCGTTT AAATTATGGCATGTTTTGCAAAGACAAAATGATTAAAAGCAATATACGGCTTGTCATATCAATTGCAAAGGGTTATCAGGGTGCTGGGATGAATCTGCAA GATCTTGTCCAGGAAGGATGTCGAGGCCTGGTAAGAGGTGCAGAAAAGTTTGATGCTTCCAAGGGTTTCAAGTTCTCCACCTATGCTCATTGGTGGATTA AACAGGCAGTTCGCAAATCGCTTTCTGATCAGTCAAGGACTATCCGCTTGCCATTTCACATGGTGGAGGCAACTTACAGAGTGAAAGAGGCTAGAAAACA ATTGTATAGTGAAAATGGAAGGCAGCCTGATGACGAAGAAGTTGCTGAGGCAACTGGACTGTCAATGAAGAGGCTTAGTGCTGTACTTTTAACCCCAAAA GCTCCTAGATCTCTGGAACAGAAGATTGGGATAGACCAGAATCTTAAACCTTCAGTCTGTCCTAATCTTTATTCAATTTTACACATTAGAAATAACTCAT GTTGTTTCATATGATGTTCATTTTGATGATATATGCATGTTTCATTTTTGGACAGGAAGTAATCGCTGATCCTGAAGCGGAAACAGCGGAAGAACAGCTG ATCAAGCAATTCATGAAGAAGGATCTTGAGAAGGTACTGGACAGTCTGAATCCAAGAGAGAAGCAGGTGATAAGATGGAGATTTGGAATGGATGATGGAA GGATGAAGACGCTGCAAGAGATTGGGGAAAGCATGGGTGTGAGTAGGGAGAGAGTTAGGCAAATTGAGTCATGTGCTTTTAGGAAACTCAAGAACAAGAA GAGAACCAAGCATTTGCAGCAGTATCTCATTTCATAAACCCACCACCAAATATTATTCAAATTACAATGTTGGATGTGAGGTCTCTAGCCACTTTTGTTC TTCCTTTGTATTTTATTTCTCCATTTTTTACTTCATTCTCTACAAGAGAAAAACAAAACGTTATTGTTAGTGTATTAGGAAACCGATGTACACACAAAGG GATAACTTTTGATGAAGAGTCCAGCATTTTTTAATGTACATGAAATGATTCAAACCAAATAAGACTCTTGAAATGAGTAATATTTTTCTTGAAGACTTAA ATCAGCCAATATTGGTAAGTGCAAATACAATCATCATCATCATCTGCTTCATCACACAACACCACCACCACCAAAGAAGAGGCAGCTCCAACATCAACGT CCTCCCACTTCTTACAACCACCTTTCACACTCTCTCTTTTCCTTCCAAACCTGTCTGAGCATATTTCCACAAGTACAACTCAATGATGGTCACTACTAGT TCATGGCAAGCAAACAGTATGAGTGCAATTGTCTTGAACTTTTGCACGAAATGTACTGTACAATGTACATTGTTCATGGGTTCTATCACTTTTGACATTG CTTCCAAGTCTTCAGAAAATGTTTCTGTGCCATCTGTTAACCCGAA
• Tissue: flowers
• Gene name: LI_gene_77781;
• Additional information: details;

Expression of Ll_transcript_7690

FPKM

• FPAB: 0.3
• FPNAB: 0.4
• LF1: 0.5
• LF2: 0.3
• LF3: 0.1
• LF4: 0.7
• UF1: 0.3
• UF2: 1
• UF3: 0.2
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_7690

• Blastp: RNA polymerase sigma factor sigB from Arabidopsis with 58.63% of identity
• Blastx: RNA polymerase sigma factor sigB from Arabidopsis with 71.66% of identity
• Eggnog: Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (By similarity)(COG0568)
• Kegg: Link to kegg annotations (AT1G08540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414778.1)
• Pfam: Sigma-70 factor, region 1.2 (PF00140.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;