Ll_transcript_7720

Id TrinityFTRINITY_DN58524_c3_g1_i20
Name TranscriptLl_transcript_7720
SequenceCGAAGAGATAAATCCACAGCTCCCACAATGGTATACATAAAGGCTCAGAAGTCAAGGGCTTACTTCAAGAGATATCAAGTCAAGTTTAAGAGAAGAAGGG AGGGAAAGACTGATTACAGAGCCAGGATTAGGTTGATTAATCAGGACAAGAATAAATACAACACCCCTAAGTACCGCTTTGTTGTTCGATTTACCAACAA GGACATCATTGCACAAATAACATCTGCTAGCATTGCGGGTGATCACATTCTTGCTGCAGCATATGCACATGAACTGCCACACTACGGTCTTCAAGTAGGC CTTACAAACTATGCTGCAGCTTATTGTACTGGACTACTTCTCGCCCGTCGAGTCCTCAAGACACTCGAATTGGATGAGGAGTATGAGGGGAATGTAGAGG CTAGTGGAGAGGATTTTTCAGTTGAACCTGCTGAGACCAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGTCTAATTAGGACCACAACTGGAAATCGTGT GTTTGGTGCCCTTAAGGGAGCTTTGGATGGGGGTTTGGATATTCCTCACAGTGACAAAAGGTTTGCTGGTTTTGATAAGGAGAAGAAGGAGCTGGATCCT GAGGTTCACCGCAAATATATCTTTGGTGGACATGTTTCTAACTATATGAAGACCTTGATCGAAGATGAGCCA BLAST
Tissueflowers
Gene nameLI_gene_77783; 
Additional informationdetails; 

Expression of Ll_transcript_7720

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_7720
Blastp60S ribosomal protein L5-2 from Arabidopsis with 85.58% of identity
Blastx60S ribosomal protein L5-2 from Arabidopsis with 85.58% of identity
EggnogThis is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)(COG0256)
KeggLink to kegg annotations (AT5G39740)
CantataDBLink to cantataDB annotations (CNT0000907)
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019414688.1)
PfamRibosomal large subunit proteins 60S L5, and 50S L18 (PF17144.3)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;