| Id Trinity | FTRINITY_DN58529_c0_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_7156 |
| Sequence | ATTAAATTTGATAATAAATAATATAGTCAAACTTTTACCTAATATTTTTTTTGTTTTCTCGTATTTTCGCACTGGAAGCAATCTTGTGCAGCCGCAGAAA CATTATGTGGGCTAACTCTGCTAAACATGTATCACTTGAACCAAACTTGTATCATTTCGGTGTATGTATCTGATATGAAATAAAAGACGACGGAGAAAGA GATCCCCACCAAATTGTCTCTCTCTTACCATGGCGGATTCCGGTTCTTCTCCCGCAACCCTAGAGCCTCCCAATCCTCAACCCGATCCCATTCCTCACTC CTCATCTCCTTCTCCTGCTAACCCTAATCCCGATCCTAATCTCAATCCCAATCCTAATCCCAATCCCAATCAAGTGTTGCTACCGCCGCCTCCGCTGCGC CCTACCCTATCATTCACGCCTGCGCCACCGCCATCCTTCAGGCCTCTTCATCCGCAGCCTCCTCACTTCTCTCCTTTGCCCAATATCACTTATCACACTC CTCCTGTTCAACCTCCTGGCGTAACTTCTACATCTTCCATGCCAATGCCGATGCAGCCCATCCTCTCCTATCACCTTCCTCCCGGCCAGCCGATGAGACC CTACGCCGTCCCCATGCCGAACGGTTACGCGCCAGCGCCTCCGCAAGGGACCATGCCTCCTGCCGGTGGGTTCTCTTTTCTCTTATTATTATTATTATTG TTGTTGTTAGGGGAAATTGCATTCACTGCCTTAGGTTGCAGAGGATTCAGTGATGTGTAAGGAAGGAACAGATAGAAAGAAATGGTGTAGTTAGTAGTAC TCAAGCGAGTGACAAGAGTATAAGACTTGTTGTCACAACATGCACAGTGCCACTAGTTTCAGACATGACAGTGTTATAGGGGTGTGAACAGAAAATAAGG GACACCAATGTCATTTTTAAGACTAGAGGAGTCTCTGTGTGTTTGTGTGTATATGTTGATGTGTGATAAAACTTTGGTGAGTGCAATTTCCCCCTATTAT TGTTTGTGTTTGTGTTTGTGCATTTAATGCTTCTTGGTAATCATTGGTATCATTGTGTTAGTTTATTGCTAGTGTAGTGAGTTTCCATGTGAATGTGAGT AATGTTAACTGTGTATTAGCAAAACGACAAAGAAAATATAGGAAGAAAAAGAAAACAGTATTAGGGCATGTTTGTTTCAAGGATTGTGAAGTTATTATCG TGAAAGTGAAATTTGAAGTATGACTGGTACAAGAATTAGGAAGTTTTCACACGTTTTGCATGATTTCTGGTAACATACATGATGTCCTGTTTTCATTTAT GAAGTTACCAAACACAGAACAAAGGCTGTCCTCTTCTGACACATCTAGCAAACGTTTCCTTACTAAAATACTAAAATACCAATGATTGATTCTCATCCTC ACTTCTTTTTGTCATGTTTCTCCACATTTTTTATTTTTTAGTTTTTGATTTCTGTGAATTGCTGCTCTGAAAAATTTATATTTTGAACGAAAACACTGAA AAACATCCCCGAAAACATTAAAATCTACCCAAAAGTTCCTTTAAAGAGTAACATTTACTAGTGGTAATGTTTATGGGAGTGTAATTCCAGGAAATGTAAT CACATGCCTTGAAACAAATGCCCTCTTAGTGATGGTAGCCTATTAAAATAATTCAGGGTTTATGCTTTATAGTGGAAAGAAGTTTGTTTCAGATAAATTG GGAGAAATTTAGAAAGTTGTTGGTTAGATAAGGGATATCGATGACGGGATGTTTTCTCCTACAGTGTCTTGACCCTTGATTGAATACGGTGAGAAAGGTT GGAAGGCTTCATATTGCTTACACACCTACATCTTCAACTCATTTTTTTGGTATGCACGTATTTGCCAGGTTTCTTGCTTGTCTTTTACTAAAATTTGAAA TATAGCTTATAGATAGTCATAACGACAATAGGAAAAAAACTGTTCATTTGATCTCATGCTCATTTTAGTAGGCTAATTTGTGCTAGTTATAAGAGTACTT TCCCTTCAATGGTTTTATGAATTCCAGAAGTCTCCCATGTTTGCAACTGAGTGCACGTTGGCCTTGAGTCCTAAGGTATTGCAATCTTTTCAATTCTCAT TTTTCTCTACCTCAGTTTTTTTCCCTTTTTAATGCTGCAAAACCGGGCTGCTATTCCTATTTAAAAGAAACATAGAAATAACTAGTTTCTTATTAAACCA AGCATGCATGAGATGAAGAAATTCTTGTGTTACGTATTTTCATTTGGTTGATGGGGTAGTTTGAGAAGCCTGCTACTGCTATTTGCAAGTGGTCAAATAA AGGTAAGATTTTTTACATGACCAGAAATTTCAAACTCGGTGGTATTTTTTAATGTTTTCTTCAGGTTGTCATTTCAGCTGGTGATTGTTGGCTCTGCTGC CATCTCTATTATGCTTTTGATGTGTGGTAACAGCATTCCATTGTTCTTGTTGCATTTTATTTACATGTATCTTCAGTGTTGTATGGATTAGTTTACTATG TATATTCACTTATAACCTGTTCTAATATATTTGCATAGCTATTTTTCTGCATCTTTACAGGAATTCCTCGTTATCCTCCTCCATATGGTATGGTTCGCCC TCTATATCCTCCACGTGCACCTGGATCAGTCAATGTTCTTCCTGTACCACGCCTACCTGTTGCTGGGGTCCCTGCAGTTCGCCCTGTTATTCCTCCTGTC ATTAGACCTGTCATTGTTCCTAGTGTCACTCCAGCTGAGAAGCCACAAATCACAGTTTACATTGGCAAGATTGCACCAACTGTGGAAAATGATTTTATGC TCAATCTCTTTCAGTTATGTGGACCGGTCAAGAGCTGGAAACGCCCTCAGGATTTATCAAATGGAACTCCTAAAGGCTTTGGGTTTTGTGAGTTTGAGTC TGATGAAGGGGTTCTTCGTGCCTTGCGTCTGCTCACTAAATTGAGCATTGATGGGCAAGAGTTAACGCTCAATGTCAATTCAACTATGAAAGAATATCTG AAGCAGTATGTTGAGAAAAAAGCTGAGAACTCAAAGAAAAATGAAACTCAGGCAGTAGGAGCTGAAAACGATGATGGAAGTGCACAACCTCCTGATGCAA ATGGGGATGGGAAACCTGATGCAGAGCACTCAAAGAAAGAGGATAATGATTCAGGTAACAAGGAATCCCATGATTTGGCAACCTTTGGTATCATCACCGC TGATGATAGGGAAGCTGATAAAGAGGCTATAGAAAAGATTACGAATATGATAGAGGAGAGGTTGAAAACCAGACCTTTGCCTATAGCTCCTGCGCAGGCA GCAGGTGATGGCTCTGCAATAATTTCGGAACAACCAGCTAAAACAAGAGATGGAGACACCGGTGTGGATATGGGGGGTAAAGAAACAACTGAAGATAAAA TTGAGAAAGATACAAACAATGACAGCAAACCAACTAGTGATCATGATAAGGCTGAGAGCCCTGATAGAAGGCATGACAGGAGAAGCAGGGAGAGAGACCG AGATAGAGATCTAAAACGAGAAAAGGAAAGGGAACTCGACAGATATGAAAGAGAGGCAGAGAGGGAGCGTATTAGAAAAGAGAGGGAACTAAGAAGAAGG ATTGATGAGGCTGAGCGGAAGTATGAAGCATGTTTGAAGGAGTGGGAATATAGAGAAAGAGAAAAAGAAAAAGAACGCCAGTATGAAAAGGAGAAAGAGA AAGAAAGGGAACGCAAACGGAGAAAGGATATACTTTATGATGAAGAAGATGAGGATGATGCTTCAAGGAAGAGATGGCGTAGAAGTGCACTAGAGGAAAG GAGAAAGAAGAGGCTGCGGGAAAAGGAAGATGACCTTGTTGACAAACTAAAAGAAGAGCAAGAAATAGCTGAAGCCAAGAAGAGGGCTGAAGACGATCAT CAACAGAAACAGCAGAGAGATGCATTGAAGATATTATCTGACCATGTGATAAATGGTGGTGAAAAAGTTATGGCCTTTGAAGTGATTACTAATGAAGCCA AAATTATTGCTTCTGAACAAGATACTGTAGCTGATTATAGTGGAGAAGGTCATATAGGTGATGTGAATTCTCTTAATGGCATCAATGATGAATCAGCCAT GGCACCCGTTTCTGAAACTGATGTGCCATCGGGTGGGAATGCTCCTTCGAAAAAGTTGGGATTTGGTTTAGTTGGGTCTGGAAAAAGAACAAATGTTCCT TCTGTTTTCCATGAGGAAGAGGATGACGATGCACACAAGAACAAAAAATTGAGGCCTTTAGTTCCAATTGATTACTCAACTGAGGAGCTCCAGGCTGTTC AACCCACTGCTTCTGGGCCGACACCACCAAATTTAGCTGCAGCTGCAGAATTCGCGAAACGTATATCCAGTGCCAGTCTCAAGGAAGAGAAGCTGGATGG AGAACGAGGTAGAAGTAGGCGCTCGAATGAGAGGTCTGCTAAACGAGACAGGGACAAGAGTGATGAAGATGGCACTCACGATAGAGATGAAAGCCGAGAG AAAATTCCTGACCGTGACAGAGATCGAGATCATGGGTCAGATAAACTCAAGACTTCAGGTAACAAGAGGCTCTTGGATGCAAAACAGTTAATTGATATGA TACCAAAGACCAAGATGGAGTTGTTCTCGTATGAGATAAACTGGGCCGTGTATGACAAGGTATGTGATTCTTGTCTGTCTGATTTTTACATGTGCAATTA TTTGCTCCCGATTCAGAAGAGATTTGCCTATATCTTTTCCATTTGGGTTGAACATAAGGTGCTAGTAAGTTGGATGATGGGCATAGCTTTATCTGTTTCC TGTTATAATATATCTAGAGTATTCTTTTATCTTTCAATCTGGAGTGCACTGTTTTTGTACCCCACAGAATAACAATGTTGGGAATCTTTTAAATGATGTG GAGAACAACACCATTAAATTCCTTGACAGTTGATTTCTTGTTTGTTTGTTAGGATTGAAAATTTAAAAAATGGCCTTGTAAGTTGTTTACTGTTTTTTTG GGGGAGAAATTGTTAGTTAGGCATGGTCTGACTCCCCCCTATCATATCCATATGTTAAGCTATCAAATCATTGTTTAAGAAGAAATTTTTGAAGATAGGT TTATTCCTAACATGGCTTCCACGACCTTAAACATGTCAAGTTATGATTATGGTACTTAGAGTTACTAATTGATCTTCTGTTTAAATATTGCATGAAAATT TTATGCTTTAAGGCTTTTCTCTCAATTACTGCATCTGTCGTACTTATTTAACTTGGAGGGCTCTTGTATGCCAATTGTTTTGTATTTAAGTAGCTTTTGC TTAAAGGTTCTTGGTGATTTAGATTTGTGTATTTTGGAGTAATTTTTTCTAAATTGTTGGTTTTATATCCCCATTTTGTGTGTTGTTCAGAATCAGCTGC ATGAAAGAATGAGACCATGGATTTCGAAGAAAATC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_77834; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7156
| Blastp | RNA-binding protein 25 from Mus with 33.54% of identity |
|---|---|
| Blastx | RNA-binding protein 25 from Mus with 38.26% of identity |
| Eggnog | RNA binding motif protein 25(ENOG410ZRGA) |
| Kegg | Link to kegg annotations (67039) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439187.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |