Ll_transcript_5220

• Id Trinity: FTRINITY_DN58534_c4_g1_i1
• Name Transcript: Ll_transcript_5220
• Sequence: GTCCGATTCTCTTAAAAGCAGAGAAAAATATTTACACACATTGGTGGGAGCCTTTTTGCCTAATTTCTAACACTGTAGAGAGTAGTTTGAGGTGTGAGCA CTGAGCAGTGAAGTGAGGCAAGTTTGTTATGGCTACTTCCAAGGCGGCAATATCTTCATTAACCCACTTGCGTCATCTAACATGCGCCGCTTCAGCATCT TCTTCTTATCCTGCGCGACTAGTACCCGACCCTCCTAATCTCATCGCATGGGTCACCAGAGAAGGTGGTTACGTGCACCCCGCGGTGAAGATAGCACACT CTCATCACTTCAATGGTCTCGGACTAGTAGCTGATCAACAAATTCCAACTGGCACTGACCTTATTATTCTCCCCGATCATATTCCTTTGAGTTTTAGGTC TTTTGAATCTGAAGATAGCGTTGATTCTGCGCTGGCTCAATTGGCACGCCAAGTTCCTGAGGAGCTATGGGCAATGAAACTTGGTTTGAAGCTTCTACAA GAAAGAGCAAAACTTGGATCATTTTGGTGGCCATATATAAGCAATCTCCCTCAAACATACAGCGTGCCTATCTTCTTTCCCGGGGAAGACATAAAGAACT TGCAGTATGCTCCTGTTCTTCACCAGGTAAACAAAAGATGCCGGTTTCTTCTTGATTTTGAGCAAGAAATCAAGCGCACCTTAGTTAATCTTGAACCAGA TAAGCATCCTTTTGGTGGTCTAGAAGTGCATGCATCTTCTCTTGGATGGGCAATGTCAGCAGTTTCATCTAGAGCATTCCGGTTATATGGTAACAAGCGA CCAGATGGAGTCCACATTGAGGTACCCATGATGCTCCCTCTCATTGATATGTGCAACCATAGTTTCAGCCCAAATGCCAGAATTGTTCAGGAACAAGATA CCGATAACATGAAGATGCAAGTGAAGGTTGTGGCTGAGATGGCTATCAAAGAAGATGAGCCTTTATTACTTAACTATGGCCGTTTAAGCAATGATTTTTT CCTTCTTGATTATGGATTTGTGATACATTCAAACCCTTATGACTGTATTGAGCTCAAATATAATGGTGCTCTTCTGGATGCTGCAAGCATGGCAGCTGGA GTTTCTTCACCAAACTTCTCAGCACCTGCTCCATGGCAGGAACTGATTTTGTCTCAGCTAAATCTAGCTGGAGAAGCTCCAGACCTCAAGGTAACGATAG GCGGTCAAGAAATAGTAGAGGGCCGCTTGTTGGCTGCATTGAGAGTACTCCTAGCAAGTGATAAGGAAACTGCACAGAACTATGACCTGAACTCACTCAA GTCTTTATCAGCTGAAGCTCCACTTGGTGTTGCAACTGACATAGCTGTATTTCGCACCCTAATTGCTCTCTGTGTCATTGCACTAGGACATTTCCCTACC AAAATAACGGATGATGTATCACTGTTGGAGCAGGGTGTTTCAGAATCAAGTGAGTTAGCCATTCAGTTCAGAATCCAAAAGAAATCTGTGATTGTAGATG TAATGAGAGAGCTCTCAAAGAGGGTAAAGCTTCTGTCGTCAAAGGAAACAGTGACTGCTGAAGAAGCTAAATGATAGTGAACATTTGGTTGGTTGCTTGT TGATTTGAATCTCATTCTATCAAGTATCAACATTGAGTATCTTCTTGTTCCCTTCCCCACATTTTTTCCATTTCCTTGCTTCTTCCTTTTCCTTTTCCAA GAAACATTTAAAGATGATATGGATTAATGAATAACGATATGAATAATGATTTGGATGTTGGTATTTCTGCTGCCCTATCTATATGAAATAATGATTTGGA GAAAATTATATCAGGTGATATTGATTCTTGCAATTTGTTATTGTAGCAATGCCC
• Tissue: flowers
• Gene name: LI_gene_77876;
• Additional information: details;

Expression of Ll_transcript_5220

FPKM

• FPAB: 3.4
• FPNAB: 7.8
• LF1: 5.7
• LF2: 3.9
• LF3: 4
• LF4: 5
• UF1: 6.4
• UF2: 3.7
• UF3: 4.5
• UF4: 4.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_5220

• Blastp: Histone-lysine N-methyltransferase setd3 from Gallus with 24.83% of identity
• Blastx: Histone-lysine N-methyltransferase setd3 from Gallus with 23.42% of identity
• Eggnog: set domain containing(ENOG410Y7DR)
• Kegg: Link to kegg annotations (423445)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446217.1)
• Pfam: SET domain (PF00856.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;