| Id Trinity | FTRINITY_DN58555_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_5865 |
| Sequence | CTGTATCTATAATCTTCATTTTGGACCCAAAACGACGACGTCTCAGGTCCCCTCTTTCTGGCGACTGGTATCTACACTGTGGTTCCCAAATCACAATCAT ACTTTGACGGCAGAGATCCGATCTGAAACAAAACTCCATTCATCTCAGCAACACCATGACGACGATGGATCCTTCTACAACGCCACTTGGACAAATGCTA TTGGACGAAATCTCTCCGGTTATCATGCTCCTTTCTACTCCCGCCGTAGAAGATTCCTCCCTCAAAAACAACCTCTCCTTTCTTCAAATCCTTTCTCCTT TCTCTTCCTTCAACAACATCGACGTTCCTGTTAGAACCGCTAGTGATCAACCTTATCGGATTCACAAGTTCAAATTGCGGTTATTTTATGCTTCTGATGT TCGGAACCCTGATTTGAAGGTAGCTAAAGAGCGTTTGAAACGAGTTATTACGGAAGCGGGGGAGAAAGTGTTCACTGAGCTCACTTCAGATGCACCAGAA ATTGATCAACATAAAAAACTTGACAGTTCTGAATACATAAATACACCATCATGGTTTCAATTTGTCAATAAAGAGCTTGTCCGTGTGGCTTCCTTTTCAG ACCATGAAGCTTTTGACCATCCTGTGGCATGTCTTCTAGCTGTCTCTTCAAAGGATGAAAAGCCCGTTAACAGATTTGTTGATCTTTTAAATAGCAACAA TCTTCCTTCCCTTCTTAATGATGGTGCAATGGATCCAAAGATTTTGAAGCTTTACTTGTTAGTGCATGATAATCAAGATGGGTCTGTAGAAAGAGCAAGT AGAATATTGACAGAAATGAGGAGTGCATTTGGTACAAGTAACTGTTTGTTGCTTTGCATTAATTCTTCATCGGATGCTCCAATCAAACATGAAGAAAATC CTTGGGCTTCATATATATCTGATGCCTCTCCTAGTCAAGATCACGGTTGCCTTCTTAACATTGATGATATCAATGAGATCAAAGATCTAATGCAAAATTT ATCATCTAAGCATATCATTCCAAACATGGAGCAAAAGATACGCGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGATTTAGAAACCAAATAAAAAAC TTATGGTGGAGAAAAGGAAAAGAGGATGGTGCAGATTCTCCCAATGGTCCTATGTATAACTATAACTCCACTGAATCCCAGATTAGAGTTTTGGGTGATT ATGCTTTCATGCTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACAGACTACAAGATTGATAAAGCCTGGAAACGTTATGCTGGTGT ACAGGAAATGATGGGACTTACATACTTCATGTCAGATCAATCAAGAAAGGAAGCTGAGTATTGCATGGAACATGCTTTTAACACATATTTAAAACTAGGA TCCCTGGGTCAGCAAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTGAAGGCACGAGATCAATATAAAGAGGCAGCTAGTGTTTATTTTCGTA TTTGTGGTGAGGATATCTTACATTCTGCTGTGATGCTTGAACAAGCATCATACTGCTACTTGCTATCTAAACCCTCCATGTTGCGCAAATATGGATTTCA TCTAGTGCTCTCTGGTGAGCAGTATAAAAAGTGTGATCAGGTCAAACATGCAATTCGAACATACAGAAGTGCTCTTTCTGTTTTTAAAGGAACTACTTGG AGTTATATTGGTGATCATGTTCATTTCCATATAGGACAGTGGTATGCTTCTATTGGGATGTATGATGTGGCTGTCAAGCATATGATGGAGATCTTGGCCT GTAGTCACCAGTCCAAGTCAACTCAGGAATTATTCCTGGGTGACTTTCTTCAAATTGTTGAGAAAGCAGGACAGACATTTGAGGTAACAAAGCTTCAATT GCCTGTGATCAACATCTCTTCGCTCAAGGTCATCTTTGAAGATTACCGGACTTTTGGATCCCCTTCGTCTGCTAATACTAGTGAAGGCTTGTGGCGTTCT TTGGAGGAAGAAATGATTCAATCATTCTCTGCTGCCAAGACAAACTGGTTGGAATTGCAATCAAAGCTTGTCTCAAGGAAGCACAGTCAATCAAATGTTT GTGTTGCAGGGGAGGCTGTGAAGGTGAACATTGAATTCAAAAATCCTCTGCAAATCTCAATCCCCATATCTGGAGTTAGACTCATTTGCAAGCATTCCAC TATTACTGATGAAGGTAGCCTAGATGAAAACAAGTCAAGTTTGGAGGATGATAACAGTGTTGATCACTTCAAGGATATGAATTCAGACAATTCCTCATTT TTGGTGTCTGATGTTGATTTCTTACTAGGAGGTGGTGAAACAACTCTGGTTCAACTATCGGTTACTCCGAGGGTAGAAGGTACTCTTGAAATTCTTGGTG TTAGGTGGAAACTGTCAGGTACTATAGTTGGCTTTCACAAGTTTGAGTTTAGCCTCCCAAAGAATATTGTAAAAGCTAGAAGGAAAGGAAAGCGCTCACC TAATGACAAGTTTAAGTTTATGGTCATTAAGAGCATACCCAAACTTCAAGCTTCCATTAATTTGTTACCTGGAAAGGCATATGCTGGAGATTTACGGCAA CTTGTTTTAGAGTTGAAGAACCCATCTGAGTTTCCTGTCAAGAATCTGAAGATGAAGGTAAGTGATCCTAGGTTCCTTATTATAGGGAATCAGGGAGATA TGAAGTCAGAGTTTCCTGCTTGCTTAACAAAGAAGACAGATTCATCGGTACAAACTGATGCACAAGCCAATAATAGTATCTTGTCTGACACAGTCTTTCT GTTTCCAGAGGGCACTTCAGTGCAAGGTGAAACACCTTTCTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGAAATTTCCCTTTACTTGAGCATA TATTATGAGATGGAAGATATATCGAGTGTCATCAAATATCGCACCCTGCGCTTGCATTACAATGTGCAGGTTAGTATAATGGATACCAAAGTGAATTTTG TGTGTGCTCCATCTGGTTTTATTTTCTCATTATGGTATACACTTTTTACCATGGTGTGAAACATAATTGAATATTATGTTCTCTGTTTGTTTGTATTATG AGTAAAAAAGGATGCCTCAATGCACAAGGCTCCCACCTAATGGAATATGGGGAGGGAAGATATATACAATCTTACCCTTGCTACCTTAGGTGGTTTGAAC ATGTGTAGAGGAGACTGTTAGAAAAGATTAGGAAAGACGTCGAGATCGACGATTTGTTAGTGAACATGATTTATGATAGAGCATTATGGTGTCGTTCAAT CCATGTAGCCGACCCCATCTAGTGAGGTTAAGGCTTGGTTGTTGTTTGCATTATGAGTAAAAAAAGGTTCTGTTAAATGACTCATTTTCACATTTACCAG TTATAGACCTAGTTTTTCTCAAGTGCCGAAAATTGTTGATCATAGGTATTACCATCACTGGATGTCTCCTTTCAAATTAGTCCTTCTCGATTGAGAATAC ATGAATTCCTTGTTCGATTGGATGTGGTTAACAAGACAAGCTCAGAATGCTTCCAAGTTTATCAGTTGTCATCTATTGGGCACCACTGGCGAATCTCATT ACTTCAACCTCCTGATACTATTTTTCCTTCACAATCATTGATGGCTGGCCAAGCAATATCATGTTTCTTCACACTAAAGAACTCAAGTAAATTATCAACT TCTGAGGACAACTTGTCTACCATGAATGTCACAAGTGATGTGAGATTGGTTCCCCAAAGCAGAGAGGATTTACTTTACGATGTAAATAGTGCATCTTTGG TCAAGTTCCACCATTATGAAAGATTGCAGCAGGAATTGTCAGATGAGGGTAATTTAAATACTGTTGATTTTTTATTGATCTCTCAAACACTCAAGAGTAA CAGTAATCCTGGGTTTTCTGATCCTCCTCGTGTAATGTCACATCATGCGTGTCACTCCTGTATTGCTAGCACGGGCCCCATTTCTTGGCTGCTAGATGGA CCTCAATCTTTGCATCATGATTTTTCTGAATCCTTCTGTGAAATAGATCTAAAGATGCATCTTTACAATTCTTCTGGTGCCACTGTTTTTGTACGGATTG ACACCTCAGATTCTGCTGGTATCGGCGGACATACCAACAGTTTTAATGCGGTTCAATCAGCAAACCCTGATAACCAAGCAGGATGGCATTATGTCCCACC AGTGAATGAACTTAAAGTCACCACATCAAATGCTCTTGAAACCCAACCAGGAAAGGCACTATCGTTGGAAAGTGTTTCCCCATTCGTCTGGTCTGGGTCA AGCTCTACCAATCTCCATCTTGAGCCTACGTCCTCCGCGGAAATCCCTCTTCAGATTTGTGTATTCACTCCGGGGACATATGACCTATCAAATTACGCGT TGAGTTGGAAACTTGCATCCAAAGTCCGGGGAGATTCTAATGACACGAAACTGCGTTCAGGCAAGTGCCAGGGGTATAAACACTATCTTACTGTGCTCCA ATCCATTTGAGAAGTTGCTAGATGTTTTGTGCTCCACTTACCACTTCATGCTGCAATGTTAGATTTGATTTGTAAATGTGGGGTGTATATATGCAATTCA TTTCTCCGTGTATTATTAAACATCTATAGAAACAAGGAACCATGTAAAAAAATTCGGAGGGAAAAATGGTAGGAAAATAAGTTCTTTTTGTTCAAACAAG ACAGTTCAGTGAACAGGCTAGCGTATTTGGACTGGCCAAATTTGAGAAAGAAAGCAATGAGCAACAGCACAAAAGATGGTTGAACCAAACTTTTGGGCGT AGTTGAAGTACCAATTGGTATTTCTAATTTTGATACACATGTTCAAAGCACTTCAAGCCAGTGTGTAAGACAAGAAGATTTATTCGGTACAATTTCTGTA TAAAAAGAAGGTTGAACCAAACTTTTGGGCGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78048; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_5865
| Blastp | Trafficking protein particle complex subunit 8 from Homo with 27.34% of identity |
|---|---|
| Blastx | Trafficking protein particle complex subunit 8 from Homo with 27.21% of identity |
| Eggnog | trafficking protein particle complex(ENOG410XPCJ) |
| Kegg | Link to kegg annotations (22878) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455479.1) |
| Pfam | ER-Golgi trafficking TRAPP I complex 85 kDa subunit (PF12739.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |