| Id Trinity | FTRINITY_DN58556_c4_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_7456 |
| Sequence | TAGGTCCATCACTTTCATTACATCGATGTGGATTGCCCCGCGAAATAGCAATAGAACTTTACCAGACATTTGTAATTCATGGCCCCGGATCTGATGAAAT AGGATGAATTGAGACGGTATTTTGTAAATACATAATTATCTTGAATATATTAACTATTTCTTTATTTTTCGATCGCCTGGAAAGAACAAAAGAAACATCT TGTTCTTTCTTCAACAATTTCTGATCTCTAGTGGACCTCTCAGTAGGATTCGAACCCAGATGAAGTTCTGACCATCTGTCAGAGAAAAAAGAACGATTCA CTCTGTATCAATGGAATCTCATCATCCATACATAACGAATTGGTGTGGTATATTCAAATCATAACATATGAACAGTAAAAACTAGTAGTCTTATTGAGAC TAGAACTCATAGGGAAGAAAATAGATTTATGAATGGAATAAAATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGTGAAAAATCAATATACTTTT AATGTCGAATCGGGATTAACTAGGACAGAAATAAAGCATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGTAA AGGGTAGAAGAATGCGACCTATTATGGGACATACAATGCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAA AAGAACTTAAATCAAAATACTTAATAACATGGCGATACATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTGAAATCC AATCCACGAAAAAATTTGATCTATGGACAGCATCGTTGTGGTAAAGGCCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGC GTCTATACCGTAAAATCGATTTTCGGCGGAATGAAAAGGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCT CATACACTATGGGGATGGTGAGAAAAGATATATTTTACACCCCAGAGGGGCTATCATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATG GGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGGCGAAACCTAGAAATCGATCACTGATCC AATTTGAGTACTTCTACAGGATAGACCTCAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCT AGAGATATAGTAATAAGTAATATGGAGAAGACAAAATTGTTTCAAGCACCGACAGAACCAGAAGCGCCCCTTGTTTCAAAGAGGGGAGGGCGGGTTATTC ACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCGACGGATTCCCCCGGGGAAAAAAAGAGATGTCTCCTACGTTACCCGTAC TATGTGGAAGTAGCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAA GATCATAACATGAGTGATTCGGCAGATTTGGATTCCTATATATCCACTCATGCGGTACTTCATTATGCGATATATATAAGATCCATCTGTATAGATATCA TCATCTACATCCAGAAAGCCGTATGCTTTGTAAGAAGCTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGC CCTTAGGCACGGCCATACATAACATAGAAATCACACTCGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGG GAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAGGTGGGGAATGTTGGGGTAAACCAG AAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTG AAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAGGAATAAATATAGTGATAATTT GATTCTGCGTCGCCGTAGTAAATAGTAAAGTCGAGAAAATAGAATTTGTTTCTTCGTCTTAAAAAAAAATAGGAGTAATTGACTGTGACATGACACGTTC ACTAAAAAAAAATCCTTTTGTAGCGAATCATTTATTAATAAAAATAAATAAACTTAACACAAAAGCAGAAAAAGAAGTAATAATAACTTGGTCGAGAACA TCTACCATTATACCCACAATGATTGGCCATACCATTGCTATCCACAATGGAAAAGAACATTTACCTATGTATATAACAGATCGTATGGTAGGCCATAAAT TGGGAGAATTTTCACCCACTCTAAACTTCCGAGGACATTCGAAAAATGATAGTAGATCTCGTCGTTAACGTTAATTTAGTAATAGTCATTTTTTAATTAC TCAAAAATAATTTCTTAGAAAGAAAAAAAATATTTATTCATTTTTTAGTGAAAATAGAACCTTATGATATGATAAAAAAAAAAAATATTTATAGATAAAA AGGTAAGAAAGGCACGCCATGACCTATTATTCTTAAATAATAAGTGGATAAAGATAAAAAAATAAAGTACAGAAATTAGGATGTATCATTTTATGTATAG TAGTCATTTTATGTTTTATGTATATTAGTGGAGAATTATGGGACAAAAAATAAATCCGCTTGGTTTCAGACTCGGGACAACTCAAAGTCATGATTCTCTT TGGTTTGCACAAACAACAAATTATTCTAATAATCTACAAGAAGATAAAAAAATACGAGATTGTATCACGAATTATATAGAAAAAAATATAAAAATATCTT CTGGTGTCGAGGGGATTGCACGGATAAAGATTCTAAAAAGAATCGATCTGATTCAAATCATAATCTATATGGGATTTCCAAAATTATTAATAGAGGGTAA GCCCCGAAGAATCGAAGAATTACAAATGAATGTGCAAAAATATGTGCACCGAAAACTCAACATTGCTATTACACGAATTTCAAACGCTTATAGACACCCT AATATTCTTGCAGAATTTATAGCTGGACAATTAAAGAATAGAGTTTCGTTTCGTAAAGCAATGAAAAAAGCTATTGAATTAACAGAACAGGCGGGTACAA AAGGAGTTCAAGTACAAATTGCAGGACGTATCGACGGAAAAGAAATTGCACGCGTCGAGTGGATCAGAGAGGGTAGGGTTCCTCTACAAACCATTCGAGC TAAAATTGATTATTGTTCCTATCCAGTTCGAACTATTTATGGGATATTAGGGATCAAAGTTTGGATATTTGTAAATTAATTTTATTTATCTTTAAGATTT CATGTTTCGATAAAACAGAAAAAATTAAAATGTATAATTTTTTATTAAAAAAAAATGCGAAATTTTTATAAGATTGAATAAATTTGATTAATTATTTGAT TTTGATATTGATAGAATTGCTATGCTTAGTGTGCGACTCGTTTATTTTTTTTTTAGGGTGGTTAGAATTCAAGAAAAAAAGAAACACCGAATCGTAGTAT GAATTAATTAATAACGAAATAACAACCAACTCATCGGTTTGTATTATCTGGACCTAACGAACTAGTCAAAATAAATATAAAAAAAGGATAGAATATATTG GAAATATAATTATAACAATTGAAATATTGCATTGCATAAAAAAAGGAAAAAAAGCGAATCTGATTATGAGTTTTAAAGCAATACGAATATACAGATAAAT GAAGGGTTGAAAGAAAGAGAGAAAAAGAATATCAATGATATAGAATTCTAATATGTCAAGGTCTACGGGTCATCTCATAACTCTCATAAAAAGTAGTGTA ATAGCGCAATTAATTAATCCATATATCCATATTATCGATGAATATATTGCTAGAACAAACAAATCAATCAAGAGCCAAGAATCAAAAAAAACTGAGAAGG TTGATTCAAGAAAAAAAAAGAATCTCATTTTAAATCTTATTAGCTCTTAGGGAGGCTCCGTTGTAGAATTCAGACCTAACCATTAAGGTAGAAGCGATGG GAACGACGAAACCTATGAATACCTAAGATTTTATTAAAAACAAATCTTAATGATTCGTTGGGTGGGATGGCGAAACGAACCAAGAACCAATCCGTTTTTT TTTTTTGAAGAGTCATCACCGATAACCCTATATTTAATCTTAAATTGATAATGAAAGAGTCCATTTTCGCCCGCGAAAATTTTTACTTTTTTATTATCCT ATTTATAATAATATTTATAAATTAAATAAAAAAAAGATTCGTTAGAATCTTATAACATAACAACATTATTTCGATCTAGTTATATATATAGATAGCATCA ATTGTCTAATTATCTATAAGAATACATGTTTAGTTATATATCAAAACAAGATATACAAATTGTCAATAGACCAATGGGTTCTATAAAATCTCAAAAAATT CCGCGATTCTATCATATTCTTCATTAAAGATATGTATGTATTTTCTATTATTTTATCAGTTAAATCTAAATCTATTTATTTTTGAAACATTTTATTTTAT TCGTGAGGAGCCGTATGAGGTGAAAATCTCATGTACGGTTCTGCAATAGCGATGGAATTGAAAAACAACCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78058; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7456
| Blastp | 50S ribosomal protein L2, chloroplastic from Carica with 100% of identity |
|---|---|
| Blastx | 30S ribosomal protein S3, chloroplastic from Lotus with 89.81% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002678) |
| Mirbase | osa-MIR5538 (MI0019059) |
| Ncbi protein | Link to NCBI protein (YP_008963639.1) |
| Pfam | Ribosomal Proteins L2, C-terminal domain (PF03947.17) |
| Rfam | Intron_gpII (RF00029) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |