| Id Trinity | FTRINITY_DN58556_c4_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_7463 |
| Sequence | CAGTAGTCCTAGCCGTAAACGATGGATACTAGGCGTTGTGTGTATCGACCCGTGCAATGCTGTAGCTAACGCTAGGGAAGAAAATAGATTTATGAATGGA ATAAAATATGCAGTATTTACAGACAAAAGTATTCGGTTATTGGTGAAAAATCAATATACTTCTAATGTCGAATCGGGATCAACTAGGACAGAAATAAAGC ATTGGGTCGAACTCTTCTTTGGTGTCAAGGTAATAGCTATGAATAGTCATCGACTCCCGGTAAAGGGTAGAAGAATGCGACCTATTATGGGACATACAAT GCATTACAGACGTATGATCATTACGCTTCAACCGGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTTAAATCAAAATACTTAATAACATGGCGATA CATTTATACAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTGAAATCCAATCCACGAAAAAATTTGATCTATGGACAGCATCGTT GTGGTAAAGGCCGTAATGCCAGAGGAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTCGGCGGAATGAAAA GGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAAATGCATACATTTGTCTCATACACTATGGGGATGGTGAGAAAAGATATATTTTA CACCCCAGAGGGGCTATCATTGGAGATACCATTGTTTCTGGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCGGTTTGAACTATTG ATTTACGTAATTGGAAGTAACCAATTAGGTTTACGGCGAAACCTAGAAATCGATCACTGATCCAATTTGAGTACTTCTACAGGATAGACCTCAACAGAAA ACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATAAAATTATTGACTCTAGAGATATAGTAATAAGTAATATGGAGAAGACAAAAT TGTTTCAAGCACCGACAGAACCAGAAGCGCCCCTTGTTTCAAAGAGGGGAGGGCGGGTTATTCACATTTCATTTGATGGTCAGAGGCAAATTGAAAGCTA AGCAGTGGTAATTCGACGGATTCCCCCGGGGAAAAAAAGAGATGTCTCCTACGTTACCCGTACTATGTGGAAGTAGCGACGTAATTTCATAGAGTCATTC GGTCTGAATGCTACATGAAGAACATAAGCCAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCAGATTTGGATTCCT ATATATCCACTCATGCGGTACTTCATTATGCGATATATATAAGATCCATCTGTATAGATATCATCATCTACATCCAGAAAGCCGTATGCTTTGTAAGAAG CTTGTACAGTTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGGCACGGCCATACATAACATAGAAATCACACT CGGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTC CGTTTGATATCCAAAAACTGCTCAGCAACAGTCGGACAGGTGGGGAATGTTGGGGTAAACCAGAAAAGTTTGGGTAGAGCCGGATCTAAATGTTGGCTAG GTAAGCGTCCTGTAGTAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAAACCCGCAAC TCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAAAACCCGCAACTCCTTGGGGTTATCCTGCACTTGGAAGAAGAAGTAGAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78058; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7463
| Blastp | 50S ribosomal protein L2, chloroplastic from Carica with 99.22% of identity |
|---|---|
| Blastx | 50S ribosomal protein L2, chloroplastic from Cucumis with 98.47% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0000963) |
| Mirbase | osa-MIR5538 (MI0019059) |
| Ncbi protein | Link to NCBI protein (XP_003605908.1) |
| Pfam | Ribosomal Proteins L2, C-terminal domain (PF03947.17) |
| Rfam | SSU_rRNA_archaea (RF01959) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |