Id Trinity | FTRINITY_DN58558_c2_g1_i10 |
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Name Transcript | Ll_transcript_7386 |
Sequence | GTTTAGGAAAGCTAATAGGAGTAGCTGACTTTACCAAAACCGTAAAACAAGGTCCATTCCTCTATCTTCATTTCACTATCTCCCTCCTTTCAATGACAGC CACCACTCGCCTGAGGCGACTCGGCACCGTAGTCGGAGCATCAGCCGCCGTATGTGGCGGCGCAATCCTACTTCACTCTCCAACCTCCGCCTCCGATGGA GGAGGGTCCTACCTCGCCTCTGTCCGGCAGAAGATACATGATCCCTTCGCCGCTGTCCCCTCGAGAGAAGTCCAGCAATCGTCGCTGATCGGCACAAGCA CGGCCAACCCTCTCGACGTCCTCGTCATCGGCGGCGGAGCCACGGGTTCCGGCGTGGCGCTAGACGCCGTGACCCGTGGACTCCGGGTCGGTCTCGTTGA GAGAGAGGATTTCTCTTCTGGAACTTCCTCCCGTTCCACGAAGCTCATCCATGGAGGTGTTCGTTACTTGGAGAAAGCTGTCTTTAAACTTGACTATGGT CAATTGAAGTTAGTATTCCATGCACTTGAAGAGCGTAGACAGGTTATTGACAATGCACCTCACCTATGCCATGCTTTGCCTTGCATGACACCATGTTTTG ATTGGTTTGAAGTAGTGTACTACTGGATTGGCTTGAAAATGTACGATTTGGTCGCAGGAGCACGACTCTTGCACTTATCAAGATATTATTCTGCAAAGGA GTCAACAGAGCTCTTTCCCACTCTGGCAACGGAGGGAGAAGGCAGAACTCTGAGGGGTACAGTTGTTTATTATGATGGGCAGATGAATGATGCACGACTT AATGTTGGATTGGCTTGCACTGCTGCATTAGCTGGTGCAGCGGTGCTGAACCATGCCGAAGTGTTATCCTTACTGAAGGATGATGCTAGTGAACGGATAA TTGGTGCACAGATTAGAGACAATTTAACTGGTAACATTGTCCTCTTATTTTTAACTGTTAATAGAGATATCAATGACTTAACATTTTTGAGTTGTTTGGT TTATCAGAAATGATAAGTTAACAAGCATGGTCTAGGTATAATATATCTGACTAAATAAAACACAAGCATTGTATGTCAGAGATGCACAATCTGATGAAGC ATTTGTTATATGTCGAAAGAAACTGCATTGGTTTTCCTTCAATTTGAATGGTTTTACCACTTTATGTGAAATTCATTATGGAAACATAGACCTTTGCATT GTGGGTAATAGATAATTGAGAAAATTACACTGACCTACCTTTCGGGTTAATTGCAATCAACACATAGGAGGTCAGTATAAATTCTGAAACAAGAGGAGTA TCAAGTATACTTAAGGCAAACCTTGGGGAAGGTCAGTGCAATTTCTTCTTAAAAGTATAGCTACTATTTTATTTTTCTGTTGTTGTTTTTATGCATAATT TTGGATTTATTTATCATGCAAATAATATCACATTGAAGTGATTGAACTTAATATACTATTTAATGTGAATTGAATGATGAGTAACTTGTCTGTGTGTGTC TGGGGAGGGGGGTATGCATGCATGAATGCAGTTAATTCAAAAGTGTGTATTTTACAGGCAGGGCTGTCAAAATGAGCCAGCCCGACTACCCAGATTGGCT CACCACAGGTTGACTGAAAAGTTACTCGGGCCAGGTTGGCCCAGTTTAGTAAATAGGGCTGCCCAGTGCATAAGACTCCCACTTAGCAGAGTTTGGGGAT TATAGATGTACACAGCCAGACAACCGTACCCCGCAAGCGGAGAGGCTATTATCTAGATTTTTCCAACCCATCTCAACCTGTAGTGAGTTAAAGAAGTTGG CTCACCGTAATTTTAAACATAAAAAAATGAAGAAAAAACCAAAAAATGTAAAAGTTAGATTATTTCCACTGCTTGCTAGATATAAGCTACCCAATAATGC TAAAAACCAGTAGCATAAACAAGATAATTGGATGATATATCTTCTAATGTTCCCACCTGGGCTGCTTTCATCTAGTGTTGTGGTAGTGCACATCTTCATT TGTAAGATTTAAGCATCTAAATTGAATTTTCACTAGTTCGATAGTTAATTAGTTCCATCTATTATTTTACTTGTCTCAGGCAAAGAGTTTAATACATATG CAAAAGTAATTGTAAATGCGGCTGGGCCATTTTGTGATGCTGTAAGGAAAATGGCTGACAAAGATGCAAGAGATATGATCTGTCCAAGCAGTGGTGTACA TATCATACTCCCTGATTATTATTCTCCTGTTGGAATGGGTTTGATTGTTCCTAAAACTAAGGATGGTCGTGTTGTTTTTATGCTGCCATGGCTGGGCCGA ACTATTGCTGGAACTACAGATTCCAATACCCCCATTACTTTCCTTCCTGAACCACATGAAGATGAAATTCAATTTATATTGGATGCCATATCTGATTACC TTAATGTTAAAGTATGCTATACCTGCCAATACAAGCGAATTTTTAACTTCTTATTTTTCTTACTTTTCTTTTGGCTGAAAATTCAGCATTAAATGATCTA GTGCATATTGCTGCTTTGGAAATAATCTGGGCCATCTTGCCAAAAAAAACAACAGTATTTTACATCATACATTCATCGACTCCATTGCTATATGATCCAA TCTTCTCATTTGTAGGAACTCCCCCTCCCCCTTCTTTAATTAATTCAGTCTGCTCTTATAAATCTTCGATTAAATCCAAGGAAAATAATTTAGTGAACTT CCTATAAATATATTTTTCTTTATGCATCTCCCTTTTACACAGTTAGCTACTGGGTACTAAATAATGGTGAGAAAATTTAGGTTCGACGTACTGATGTTCT TTCTGCATGGAGTGGTATTCGCCCATTAGCAATGGATCCTTCTGCTAAAAATACTGAGAGCATCTCCAGGGATCATGTTGTCTTCGAGGATCACCCTGGT TTGGTCACCATCACTGGTGGCAAGTGGACTACCTATCGCAGCATGGCAGAAGATGCTGTTAATGCAGCTATAAAGTCAGGGATGCTGACTCCCTCGAATG AATGTGTGACCAACAATCTCCGGATTGTTGGCGGTGAAGGGTGGGATCCTGCTTTTTTTACAGTTCTCACTCAGCAATATATGCGCATGAAATTATCATC TAAGGGTAAAATTGTTCCTGGGATAATGGACAGTGCTGCAGCAAAGCACTTGTCTCGTGCCTATGGAACATTGGCTGAACGTGTGGCTGCCATTGCTCAG GATGAAAATTTGGGTAAGCGACTTGCCCATGGTTACCCTTTTCTGGAGGCTGAGGTGGCCTACTGTGCTCGTCATGAGTACTGTGAATCTGCTATTGACT TCATTGCAAGGAGGAGTCGTCTCGCTTTCCTTGACACTGATGCAGCCGGGCGGGCATTACCTCGTGTGATTCAAATATTGGCAGCTGAGCACAAATGGGA CAAATCAAGGCAGAAGGAAGAGTTGCAGAATGCTAAGGCATTTTTGGAGACTTTCAAATCCTCAAAAAATGCTCAGTTCCACGATGGAAAACACGTTTAA ACCAATGGTGTCTCTTCATCTTATGCATAAAGAACCACACTCTTGGTCTGGGTAACTGTCTTTCAAAAATAAGTGTCCCTCCAAGAATCGAACTTTGACC TTTGGCCTAGTAAGATAATCGGAGATCTAGTTATGGACTTCAACTAGAAAGGTATCACCCTTACCAGCATGTTAGTATTCCCTTACCATTTTCAATATAT GACCACTGCAAAAGAGTAGCTTCATAAATCTTTGAATTCAACTCTAAATGTTAGTTCGAGAGTTGGATTTTGGAGGGAAAGGAAAGGAAAGAGAAAGTTT GGGAGTAATTTCACAAATGTATTTCATGATTTTCAATCCTTCCTTTTCCCTTCATTCTCCTCCAAAATTCAACTCTCAAACTAAATAATAGATATCTTAG GACCTTGTACCTCTGTGAGTTGTGTATCAAGTTAATGTAATGAACCGTTTGGTTGTGCTTTAGATTATCACTGGCTAACTTTTATATTTTTATTAATAAA ATCGAATTGATAACTCATACATCACAGTATATTGAACTTATCCCTATGTTTGGAAAAAAAATACATGAAAGGGTGGAATGTTCGCAATTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_78073; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7386
Blastp | Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial from Arabidopsis with 78.28% of identity |
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Blastx | Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial from Arabidopsis with 79.58% of identity |
Eggnog | glycerol-3-phosphate dehydrogenase(COG0578) |
Kegg | Link to kegg annotations (AT3G10370) |
CantataDB | Link to cantataDB annotations (CNT0001092) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462224.1) |
Pfam | C-terminal domain of alpha-glycerophosphate oxidase (PF16901.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |