| Id Trinity | FTRINITY_DN58558_c2_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_7387 |
| Sequence | GTTTAGGAAAGCTAATAGGAGTAGCTGACTTTACCAAAACCGTAAAACAAGGTCCATTCCTCTATCTTCATTTCACTATCTCCCTCCTTTCAATGACAGC CACCACTCGCCTGAGGCGACTCGGCACCGTAGTCGGAGCATCAGCCGCCGTATGTGGCGGCGCAATCCTACTTCACTCTCCAACCTCCGCCTCCGATGGA GGAGGGTCCTACCTCGCCTCTGTCCGGCAGAAGATACATGATCCCTTCGCCGCTGTCCCCTCGAGAGAAGTCCAGCAATCGTCGCTGATCGGCACAAGCA CGGCCAACCCTCTCGACGTCCTCGTCATCGGCGGCGGAGCCACGGGTTCCGGCGTGGCGCTAGACGCCGTGACCCGTGGACTCCGGGTCGGTCTCGTTGA GAGAGAGGATTTCTCTTCTGGAACTTCCTCCCGTTCCACGAAGCTCATCCATGGAGGTGTTCGTTACTTGGAGAAAGCTGTCTTTAAACTTGACTATGGT CAATTGAAGTTAGTATTCCATGCACTTGAAGAGCGTAGACAGGTTATTGACAATGCACCTCACCTATGCCATGCTTTGCCTTGCATGACACCATGTTTTG ATTGGTTTGAAGTAGTGTACTACTGGATTGGCTTGAAAATGTACGATTTGGTCGCAGGAGCACGACTCTTGCACTTATCAAGATATTATTCTGCAAAGGA GTCAACAGAGCTCTTTCCCACTCTGGCAACGGAGGGAGAAGGCAGAACTCTGAGGGGTACAGTTGTTTATTATGATGGGCAGATGAATGATGCACGACTT AATGTTGGATTGGCTTGCACTGCTGCATTAGCTGGTGCAGCGGTGCTGAACCATGCCGAAGTGTTATCCTTACTGAAGGATGATGCTAGTGAACGGATAA TTGGTGCACAGATTAGAGACAATTTAACTGGTAACATTGTCCTCTTATTTTTAACTGTTAATAGAGATATCAATGACTTAACATTTTTGAGTTGTTTGGT TTATCAGAAATGATAAGTTAACAAGCATGGTCTAGGTATAATATATCTGACTAAATAAAACACAAGCATTGTATGTCAGAGATGCACAATCTGATGAAGC ATTTGTTATATGTCGAAAGAAACTGCATTGGTTTTCCTTCAATTTGAATGGTTTTACCACTTTATGTGAAATTCATTATGGAAACATAGACCTTTGCATT GTGGGTAATAGATAATTGAGAAAATTACACTGACCTACCTTTCGGGTTAATTGCAATCAACACATAGGAGGTCAGTATAAATTCTGAAACAAGAGGAGTA TCAAGTATACTTAAGGCAAACCTTGGGGAAGGTCAGTGCAATTTCTTCTTAAAAGTATAGCTACTATTTTATTTTTCTGTTGTTGTTTTTATGCATAATT TTGGATTTATTTATCATGCAAATAATATCACATTGAAGTGATTGAACTTAATATACTATTTAATGTGAATTGAATGATGAGTAACTTGTCTGTGTGTGTC TGGGGAGGGGGGTATGCATGCATGAATGCAGTTAATTCAAAAGTGTGTATTTTACAGGCAGGGCTGTCAAAATGAGCCAGCCCGACTACCCAGATTGGCT CACCACAGGTTGACTGAAAAGTTACTCGGGCCAGGTTGGCCCAGTTTAGTAAATAGGGCTGCCCAGTGCATAAGACTCCCACTTAGCAGAGTTTGGGGAT TATAGATGTACACAGCCAGACAACCGTACCCCGCAAGCGGAGAGGCTATTATCTAGATTTTTCCAACCCATCTCAACCTGTAGTGAGTTAAAGAAGTTGG CTCACCGTAATTTTAAACATAAAAAAATGAAGAAAAAACCAAAAAATGTAAAAGTTAGATTATTTCCACTGCTTGCTAGATATAAGCTACCCAATAATGC TAAAAACCAGTAGCATAAACAAGATAATTGGATGATATATCTTCTAATGTTCCCACCTGGGCTGCTTTCATCTAGTGTTGTGGTAGTGCACATCTTCATT TGTAAGATTTAAGCATCTAAATTGAATTTTCACTAGTTCGATAGTTAATTAGTTCCATCTATTATTTTACTTGTCTCAGGCAAAGAGTTTAATACATATG CAAAAGTAATTGTAAATGCGGCTGGGCCATTTTGTGATGCTGTAAGGAAAATGGCTGACAAAGATGCAAGAGATATGATCTGTCCAAGCAGTGGTGTACA TATCATACTCCCTGATTATTATTCTCCTGTTGGAATGGGTTTGATTGTTCCTAAAACTAAGGATGGTCGTGTTGTTTTTATGCTGCCATGGCTGGGCCGA ACTATTGCTGGAACTACAGATTCCAATACCCCCATTACTTTCCTTCCTGAACCACATGAAGATGAAATTCAATTTATATTGGATGCCATATCTGATTACC TTAATGTTAAAGTATGCTATACCTGCCAATACAAGCGAATTTTTAACTTCTTATTTTTCTTACTTTTCTTTTGGCTGAAAATTCAGCATTAAATGATCTA GTGCATATTGCTGCTTTGGAAATAATCTGGGCCATCTTGCCAAAAAAAACAACAGTATTTTACATCATACATTCATCGACTCCATTGCTATATGATCCAA TCTTCTCATTTGTAGGAACTCCCCCTCCCCCTTCTTTAATTAATTCAGTCTGCTCTTATAAATCTTCGATTAAATCCAAGGAAAATAATTTAGTGAACTT CCTATAAATATATTTTTCTTTATGCATCTCCCTTTTACACAGTTAGCTACTGGGTACTAAATAATGGTGAGAAAATTTAGGTTCGACGTACTGATGTTCT TTCTGCATGGAGTGGTATTCGCCCATTAGCAATGGATCCTTCTGCTAAAAATACTGAGAGCATCTCCAGGGATCATGTTGTCTTCGAGGATCACCCTGGT TTGGTCACCATCACTGGTGGCAAGTGGACTACCTATCGCAGCATGGCAGAAGATGCTGTTAATGCAGCTATAAAGTCAGGGATGCTGACTCCCTCGAATG AATGTGTGACCAACAATCTCCGGATTGTTGGCGGTGAAGGGTGGGATCCTGCTTTTTTTACAGTTCTCACTCAGCAATATATGCGCATGAAATTATCATC TAAGGGTAAAATTGTTCCTGGGATAATGGACAGTGCTGCAGCAAAGCACTTGTCTCGTGCCTATGGAACATTGGCTGAACGTGTGGCTGCCATTGCTCAG GATGAAAATTTGGGTAAGCGACTTGCCCATGGTTACCCTTTTCTGGAGGCTGAGGTGGCCTACTGTGCTCGTCATGAGTACTGTGAATCTGCTATTGACT TCATTGCAAGGAGGAGTCGTCTCGCTTTCCTTGACACTGATGCAGCCGGGCGGGCATTACCTCGTGTGATTCAAATATTGGCAGCTGAGCACAAATGGGA CAAATCAAGGCAGAAGGAAGAGTTGCAGAATGCTAAGGCATTTTTGGAGACTTTCAAATCCTCAAAAAATGCTCAGTTCCACGATGGAAAACACGTTTAG TTATGGACTTCAACTAGAAAGGTATCACCCTTACCAGCATGTTAGTATTCCCTTACCATTTTCAATATATGACCACTGCAAAAGAGTAGCTTCATAAATC TTTGAATTCAACTCTAAATGTTAGTTCGAGAGTTGGATTTTGGAGGGAAAGGAAAGGAAAGAGAAAGTTTGGGAGTAATTTCACAAATGTATTTCATGAT TTTCAATCCTTCCTTTTCCCTTCATTCTCCTCCAAAATTCAACTCTCAAACTAAATAATAGATATCTTAGGACCTTGTACCTCTGTGAGTTGTGTATCAA GTTAATGTAATGAACCGTTTGGTTGTGCTTTAGATTATCACTGGCTAACTTTTATATTTTTATTAATAAAATCGAATTGATAACTCATACATCACAGTAT ATTGAACTTATCCCTATGTTTGGAAAAAAAATACATGAAAGGGTGGAATGTTCGCAATTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78073; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7387
| Blastp | Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial from Arabidopsis with 78.28% of identity |
|---|---|
| Blastx | Glycerol-3-phosphate dehydrogenase SDP6, mitochondrial from Arabidopsis with 79.58% of identity |
| Eggnog | glycerol-3-phosphate dehydrogenase(COG0578) |
| Kegg | Link to kegg annotations (AT3G10370) |
| CantataDB | Link to cantataDB annotations (CNT0001092) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462224.1) |
| Pfam | C-terminal domain of alpha-glycerophosphate oxidase (PF16901.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |