| Id Trinity | FTRINITY_DN58559_c1_g3_i16 |
|---|---|
| Name Transcript | Ll_transcript_5961 |
| Sequence | ATTTTTATTCCATGCGTAAGAGATGGTTATTGTTGTTATTATTATTATCATTAGTGAGGAACAGAAAGAAAAGCGTGACCCTTCCCTGACAGAAGAAACG ATGCCGGAGGAAACGACGGCGATTGACTACGTCATGGAGGCTGCTTCCGGTCCTCACTTCTCCGGCCTCCGTCTTGACGGCCTCCTCTCATCTCCACCTT CTTCTCCTGCTCATCATTTCTCTTCTTCTTCTCTCTCCCCTGATTCTCTTCCAATTCAACCTTTCATTATAGGAGTTTCGGGAGGTACTGCTTCGGGAAA GACTACAGTGTGCGATATGATCATTCAGCAACTCCACGATCACCGCGTTATACTCGTCAATCAGGATTCATTTTATCGCGGTTTAACTCCTGAAGAATTG AAGCGTGTTCATGAGTACAATTTTGATCATCCTGATGCTTTTGACACTGCACAGATGCTAGAGTGTGTGGGAAAGCTGATAAGTGGCCAAAGCGTCCAAG TTCCCATTTATGACTTTAAGAATCATCAGCGATCTTCTGAAAATTTTCGGCAGGTCAATGCTTCTGATGTTATTATATTGGAGGGAATTCTTGTATTCCA TGACCAAAACTTACGGGATCTGATGAACATGAAGATCTTTGTTGATGCAGATGCTGATGTGAGGCTTGCTCGTAGGATTAGACGTGACACAGTGGAGAGG GGCAGGGATATAAACTCTGTTCTCGAACAGTATGCGAAGTTTGTTAAGCCAGCCTTTGATGATTTTGTTTTACCATCAAAGAAGTATGCTGATGTGATCA TTCCTCGAGGAGGTGATAATCATGTTGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAACAT TTATGTTATTCAGTCAACATTCCAGATAAGGGGAATGCATACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTT ATTCGTCTGGTTGTTGAGCATGGCCTTGGCCATCTGCCATTCGTTGAGAAGCAAGTAGTTACTCCGACAGGATCTGTCTACACCGGTGTTGACTTCTGCA AGAAATTGTGTGGCGTTTCAATTATTCGAAGTGGTGAGAGTATGGAAAATGCACTTCGAGCGTGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCA TCGGGATGGAGACAATGGAAAACAGCTTATTTATGAGAAGCTTCCCAAGGATATTTCAGAACGCCATGTCTTGCTTCTTGACCCTGTCTTGGCTACAGGT AACTCTGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCGGAATCCCACATTATATTCCTGAATCTCATATCTGCTCCGGAGGGAATCCATT GCGTGTGTAAAAAGTTTCCCTCACTGAAAATTGTCACATCTGAGATTGACCATGCATTAAACGAAGAGTTTCGTGTTATCCCAGGATTGGGTGAGTTTGG CGATCGCTACTTTGGGACCGACGATTGATCTTGCCTTGTGACATAAGATGTAAACCACCTTCTGGTTAGCAGCTTCCTTGTGATGGGATATGATATTAAA GATCCAGCAAGAGCCAGCTTCTCTGATTTAAACAATATGAAGTAACTCATTTTTTCGGGTTAATGATCATGTTTTCAGCTTATAAGCTGGTATCTAGAGA TGAATTCACTGTTAATTTTTTATGTTTTTAGATATGTAACTTTTCATTGTTTTCCCTTCTCAAAAGAATTGGAAGATGAGTATGAGTCATTACTTGCTTC ATTCATGCTCATGAATTATGTTCTAGATAGAAGTTGAAGTTTTAGACATTTTGAAATTCTTGTTTTGTGTATGCATGAGACATGTGGTTTTCATGTGACA TCATATATTCTTCGTATTCTTTATAGTTGGGCACAATTTGAAGCTTGTTTGGTTTAGTATTTTTATGTGGAAAAGAAATAAATGAAGGATATTACATTGA ACGGTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78085; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_5961
| Blastp | Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 85.12% of identity |
|---|---|
| Blastx | Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 85.3% of identity |
| Eggnog | Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)(COG0035) |
| Kegg | Link to kegg annotations (AT5G40870) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447447.1) |
| Pfam | Phosphoribulokinase / Uridine kinase family (PF00485.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |