Ll_transcript_5962

• Id Trinity: FTRINITY_DN58559_c1_g3_i17
• Name Transcript: Ll_transcript_5962
• Sequence: ATTTTTATTCCATGCGTAAGAGATGGTTATTGTTGTTATTATTATTATCATTAGTGAGGAACAGAAAGAAAAGCGTGACCCTTCCCTGACAGAAGAAACG ATGCCGGAGGAAACGACGGCGATTGACTACGTCATGGAGGCTGCTTCCGGTCCTCACTTCTCCGGCCTCCGTCTTGACGGCCTCCTCTCATCTCCACCTT CTTCTCCTGCTCATCATTTCTCTTCTTCTTCTCTCTCCCCTGATTCTCTTCCAATTCAACCTTTCATTATAGGAGTTTCGGGAGGTACTGCTTCGGGAAA GACTACAGTGTGCGATATGATCATTCAGCAACTCCACGATCACCGCGTTATACTCGTCAATCAGGATTCATTTTATCGCGGTTTAACTCCTGAAGAATTG AAGCGTGTTCATGAGTACAATTTTGATCATCCTGATGCTTTTGACACTGCACAGATGCTAGAGTGTGTGGGAAAGCTGATAAGTGGCCAAAGCGTCCAAG TTCCCATTTATGACTTTAAGAATCATCAGCGATCTTCTGAAAATTTTCGGCAGGTCAATGCTTCTGATGTTATTATATTGGAGGGAATTCTTGTATTCCA TGACCAAAACTTACGGGATCTGATGAACATGAAGATCTTTGTTGATGCAGATGCTGATGTGAGGCTTGCTCGTAGGATTAGACGTGACACAGTGGAGAGG GGCAGGGATATAAACTCTGTTCTCGAACAGTATGCGAAGTTTGTTAAGCCAGCCTTTGATGATTTTGTTTTACCATCAAAGAAGTATGCTGATGTGATCA TTCCTCGAGGAGGTGATAATCATGTTGCTATTGATTTGATTGTGCAGCATATTCGCACAAAGCTTGGTCAACATGATCTATGCAAAATATATCCAAACAT TTATGTTATTCAGTCAACATTCCAGATAAGGGGAATGCATACATTGATTCGTGACCAAGACATATCAAAGCATGATTTTGTATTTTATTCAGATCGACTT ATTCGTCTGGTTGTTGAGCATGGCCTTGGCCATCTGCCATTCGTTGAGAAGCAAGTAGTTACTCCGACAGGATCTGTCTACACCGGTGTTGACTTCTGCA AGAAATTGTGTGGCGTTTCAATTATTCGAAGTGGTGAGAGTATGGAAAATGCACTTCGAGCGTGTTGTAAAGGCATTAAAATTGGAAAAATTCTGATTCA TCGGGATGGAGACAATGGAAAACAGCTTATTTATGAGAAGCTTCCCAAGGATATTTCAGAACGCCATGTCTTGCTTCTTGACCCTGTCCTGGCCACAGGT AACTCTGCCAACCAAGCAATTGAGTTACTCATTCAGAAAGGAGTTCCCGAATCACACATTATATTCCTGAATCTCGTATCAGCTCCTGAGGGAATCCATT GCGTGTGTAAAAAGTTTCCCTCTTTGAAAATTGTCACATCTGAGATTGATCACACATTAAATGAAGAGTTTCGGGTTATCCCAGGATTGGGTGAGTTTGG TGATCGCTACTTTGGTACTGATGATTGATCCTGCCCTGCAAAATAAGGTGTAAACAACCTTCAGATTTGAAGCTTCCTTGTGATGGGATATTAAAAGATC CAACAAGAGCTAGCTTCTCTGATTTAAATATTATTGAAGTAACTCAGTTTTAAATTTATGATCATGGTTTTCAGCTTATAAGCTGCCATGTAGAGGTGAA TTCACTGTCAATTTTTATTTTTCTAGATATGTACCTTCTCAGTCTTTTCCTCAGAATAATTGGAAGACATGATGGGATTTAAAAATACTACTACTAGTAT GATGATATCATGAGTTATATTCCAGAAGGAAAAAAAGATGAATTGAAGTTTTGATGTTTTGAAGTTCTAATTGTGAATGCATAAAATACATGTTTTAATG GAGGAAGGATTGCACCTCTTATGCATTTGGTATGCTTTGAAAATGTGGGAAAAATAATCTGGAGGAATGATTTTTTCATCTTTCTCCAGTTCTCCACTTG GACTGAAAGAAAAGGGAGGGAAGAGAATAAAATTTTGTTGGTTCCATCCAATTTTATGCATTTATATTTGTATTAGTTTATATGCAGTTTTTATTACTTT
• Tissue: flowers
• Gene name: LI_gene_78085;
• Additional information: details;

Expression of Ll_transcript_5962

FPKM

• FPAB: 0.6
• FPNAB: 1.1
• LF1: 1.5
• LF2: 2.5
• LF3: 4.3
• LF4: 3.6
• UF1: 2.9
• UF2: 1.1
• UF3: 2.8
• UF4: 3.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_5962

• Blastp: Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 84.92% of identity
• Blastx: Uridine kinase-like protein 1, chloroplastic from Arabidopsis with 85.09% of identity
• Eggnog: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (By similarity)(COG0035)
• Kegg: Link to kegg annotations (AT5G40870)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019447447.1)
• Pfam: Phosphoribulokinase / Uridine kinase family (PF00485.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;