| Id Trinity | FTRINITY_DN58567_c1_g1_i10 |
|---|---|
| Name Transcript | Ll_transcript_5927 |
| Sequence | TGTTATTGCAACTCAGTGCCGTAACCTTCAAAACAGGAGAAAATATCTCACACTCTTTCTCTCTTTCACCTTTTACTCACTCACTCACTCACACTTTCAT TACCATAACCCTAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCTCTTTCCAACGACGCCGTTTCCAACGACAAGAAGCTCAAGAAGGAGAAGAAAGT GAAATCCACCGACAATGTCAAGAACCTGAACGACGCCGTTTCAGATAGCAAGAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGTT TCATCATCTTCTGAAGAAGAAGATGATGATGATGTGAAGAGTGAGACTAGTTCTGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAGTAAGA AAGCGAAGGTGGAGGTGGAAGAGGAAGAAGAGACTGAGGCTGAGGTTGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATATCGGAACCGTTGAA GGCGAAGCTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATCATTCTCGATGGCGACGATTTGGTTGGTCGTGCTCGC ACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTACGGGAGGGCTC CAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCCAAACAGGTTCATGCTGACTTTGAAGTTTATGGTGGGTCATTGGGATTGGTTTCTTGCTGTTT ATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGTCGCATAAAGGATCATATCGAGAGG GGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGCA AAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAA AACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCCC GACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAGCTCGCAGGGGTTTTGCCTGGAGCAAGAC CTCTCCATGGTGACATACAACAGTCACAACGTGAGATTACATTGTCAGGCTTTAGGTCTGGAAAGTTCTTGACATTGGTGGCCACAAATGTGGCAGCTAG GGGTCTGGATATCAATGATGTTCAGTTAATTATCCAGTGTGAGCCTCCAAGGGATGTTGAAGCATATATCCATCGTTCTGGACGTACAGGAAGAGCTGGT AATACTGGAGTTGCTGTGATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAAAGAGAATCCGGTGTGAAGTTTGAACATATTTCTGCTCCCC AGCCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCGGCTGAAAAGATTTTGCAAGTGTCTGATAGTGTTGTTCCTGCATTCAAGTCTGCTGCTGAGGG GCTTTTGAACAATAGTGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTTGCCAAGTCTGTTGGTTTTACTGAGATAAAGAAAAGATCGCTTCTGACT TCCATGGAGAATTATGTTACATTACTTCTAGAGATCGGAAAACCCATCTTCACCCCGTCGTTTGCATTTGGAGTCTTGAGGAGATTAGTGCCGGAGGAGA TGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGCTGCTGTTTTTGACGTACCTGCCAAAGATTTAGATGCATTTATAACCGGTGAAGT TTAACTATTTTTTTGACCTATGATTTCGAGAATTTAAAAAAATCTTTTGATCATAGATACCTATAGCATCCATCAACTTCCCCTTCCATGAAGGTCGTAA TTACTGCTTTGTGTTTGATTCCTTGCTATCCTTTTCAAGCTTTAGCTCTACACTGCTTTGTTTTCATTTTGGGTTATTTTCAGTTGAATTGTTTTGTGCT TTTCAGGTCAGCAAAACGCTGCCAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGCGTTTGCAAGAAAGAGACCAATCGAAAGTGGGTAGATATGGCGG CGGTGGCGGCGGTGGTCGAGGGTTTAATGACAGAAGTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGGAGGAATGGGAGGTTTTCAAATGGTTTTGGT GGTGGGAGAGGTGGGAACAGAGGAGGAAGGAGATGGTAAAGGAGTTAGTGAAGATGGTTCACGAGCTTTATATATAATATGGGGTTGAGTTTTACCCTAT AGTTTGTTATTTGTTTATTTATCTGAATTTTGACATGTGTAAGAATTGCATTTCAATATGAATGACAATGATAATGAAGAAAAGAGAAATAGTTTTTTTG GTTACATAAAAAGAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78145; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_5927
| Blastp | DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 77.22% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 77.39% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (AT5G62190) |
| CantataDB | Link to cantataDB annotations (CNT0002891) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449411.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |