Ll_transcript_5921

• Id Trinity: FTRINITY_DN58567_c1_g1_i4
• Name Transcript: Ll_transcript_5921
• Sequence: TGTTATTGCAACTCAGTGCCGTAACCTTCAAAACAGGAGAAAATATCTCACACTCTTTCTCTCTTTCACCTTTTACTCACTCACTCACTCACACTTTCAT TACCATAACCCTAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCTCTTTCCAACGACGCCGTTTCCAACGACAAGAAGCTCAAGAAGGAGAAGAAAGT GAAATCCACCGACAATGTCAAGAACCTGAACGACGCCGTTTCAGATAGCAAGAAGAAGAAGAGTGGCTCCAAGGAGATCAAGAAGAAGCGGAAGAAGGTT TCATCATCTTCTGAAGAAGAAGATGATGATGATGTGAAGAGTGAGACTAGTTCTGATGTTGTTGAGGGTTTGAAAACGAAGGAGAAGAAGAAGAGTAAGA AAGCGAAGGTGGAGGTGGAAGAGGAAGAAGAGACTGAGGCTGAGGTTGAAGTTGAGAATCCTAATGCGGTTTCCAATTTTAGGATATCGGAACCGTTGAA GGCGAAGCTGAAGGAGAAGGGGATTGAAGCGTTGTTCCCGATTCAAGCTATGACCTTCGATATCATTCTCGATGGCGACGATTTGGTTGGTCGTGCTCGC ACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTCCAGCAAAAGCATCAAGAAAGTTGGGCTACGGGAGGGCTC CAAGTGTCGTTGTGCTTCTACCTACTAGGGAATTGGCCAAACAGGTTCATGCTGACTTTGAAGTTTATGGTGGGTCATTGGGATTGGTTTCTTGCTGTTT ATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGTCGCATAAAGGATCATATCGAGAGG GGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGATGTTGAACTCATTTTAGGCA AAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGATTTTTGAAACGTGATAAAAA AACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTGCTAGGGCCCAGCTTATCCCC GACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAACTTGCTGGGGTCTTGCAGGGAGCAAGAC CTCTCCATGGTGACATACAACAGTCCCAACGTGAGGTGACTTTGTCAGGTTTTAGGTCTGGAAAATTCATGACATTGGTGGCCACAAATGTGGCAGCTAG GGGTCTGGATATCAATGATGTTCAGTTAATTATCCAGTGTGAACCTCCACGGGATGTAGAAGCATACATCCATCGTTCTGGACGTACAGGAAGAGCTGGT AATACTGGAGTTGCTGTAATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAGAGAGAATCAGGTGTCAAATTTGAACATGTATCGGCTCCTC AGTCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAATTAATTTTACAAGTATCTGATAGTGTGGTTCCTGCATTCACATCTGCTGCTCAGGG GCTTTTGAATAACAGCGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTAGCCAAGGCTGTTGGTTTTACTGAGATAGTGAAAAGATCACTTCTGACT TCCATGGAGAATTATGTCACATTACAGCTTGAGATTGGAAAACCTATTTTCACCCCATCTTTTGCATTTGGAATCCTGAGGAGATTCGTGCCGGAGGAGA AGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGGTGCTGTTTTTGATGTACCAGCAAAAGAGTTAGATGCATTTATTACTGGTCAGCA AAATGCTGCTAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGCAGTTGCAAGAAAGAGACCAGTCAAAAGTGAGCAGATATGGTGGTGGAGGTCGTGGG TTTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGCAGGAATAGTAGATTTTCAGGTGGTTACGGTGGTGGTAGAGGCGGAAAGAGATGGTAAAGGAGTT AGTGAGATGATGGTTCATGAGCCCCATATCCGTGAGCTTAATTTTTAACCTATAGTTTGTTATTTGTGTTGAACTATTATTAATCCCATTTATCTCAATT TTTACATGAACATGTAAGAATTGAATTTCTATAGGATTGACAATGATAATGAAGAAAAGAGAAATATTTATTTTGCCATTTGTTTCACCGCCAAGTTTCT ATACTAACATGGTTTGTTATAATTCCTC
• Tissue: flowers
• Gene name: LI_gene_78145;
• Additional information: details;

Expression of Ll_transcript_5921

FPKM

• FPAB: 9.7
• FPNAB: 18.2
• LF1: 11.5
• LF2: 7.8
• LF3: 10
• LF4: 13.8
• UF1: 8.5
• UF2: 12.7
• UF3: 13.7
• UF4: 14.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_5921

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.16% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 76.31% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: Link to cantataDB annotations (CNT0002891)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449411.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;