Ll_transcript_5924

• Id Trinity: FTRINITY_DN58567_c1_g1_i7
• Name Transcript: Ll_transcript_5924
• Sequence: CCAAAGCCTAAACCATAAAACCCAAAAACCAGGACGCAGCCCTTCCTCTTTATTCTCCTGCTTCTGCAACTCACTGCCGTAACCTTCGTAGCAGGAGAAA ATATCTCTCTCCCACCTTTTACTCACACCAACGAATCAAAACGCACCGTTTCGCCACCATGCCTTCTCTTCCCATCTCCAACGACGCCGTTTTCACCAGC GACAAGAAACTGAAGAAGGAAAAGAAAACCAAGAAAAACGACGCCGACAACGACAACGAGAACCACTCTCTAAACGACGCCGTTTCCGTTAAGAAGAGTT CTTCGAAAGAGAGCAAGAAGAAGCGGAAGAAGCTTTCATCTTCTGATGAGGAAGGTGATGACGATGAAGATGAGAAGAAGAGTGAGAATGGCGATGAGGG TTTGAAATCGAAGAAGAAGAGTAAGAAAGCGAAGTTGGATATGGAAGAGGAAGAAGAGGTTGAGGTTGAACCTGAGAATCCAAACGCGGTGTCCAATTTC AAGATATCGGAACCGTTGAAAGCGAAACTGAAGGAGAATGGAATTGAAGCCCTGTTCCCGATTCAAGCCACGACATTCAAAATTATCCTCGATGGCTCCG ATTTGGTTGGTCGTGCTCGCACTGGTCAGGGTAAAACTTTGGCTTTTGTGTTGCCCATATTAGAGTCTTTAACAAATGGTATGGCAAAAGCATCGAGGAA GGTGGGCTACGGGAGGACTCCAAGTGTCATTGTGCTTCTACCTACTAGGGAGTTGGCCAAACAGGTGCATGCTGATTTTGAAGCTTATGGTGGGGCAGTG GGACTGGCTTCTTGCTGTTTATATGGTGGAGCTCCATATCAGACTCAAGAGATGAAGCTCAAGAGGGGTGTTGATATTGTTATTGGCACACCTGGTCGCA TAAAGGATCATATCGAGAGGGGAAACATTGACCTGAGCCTACTAAGGTTCCGTGTCCTTGATGAGGCTGATGAGATGCTGAGAATGGGTTTTGTTGAAGA TGTTGAACTCATTTTAGGCAAAGTAGAAGATGTTAACAAAGTTCAGACACTTCTTTTCAGTGCTACATTACCAGTCTGGGTTAAGCAGATTTCTACAAGA TTTTTGAAACGTGATAAAAAAACTGCTGATCTTGTCGGGAATGAGAAAATGAAGGCTAGCAACAATGTTAGACATATTGTTCTTCCATGCAATTTTTCTG CTAGGGCCCAGCTTATCCCCGACATCATTCGCTGTTATAGCAGTGGAGGCCGGACAATTATTTTTACTGAGAAAAAGGAGTCTGCTTCTGAACTTGCTGG GGTCTTGCAGGGAGCAAGACCTCTCCATGGTGACATACAACAGTCCCAACGTGAGGTGACTTTGTCAGGTTTTAGGTCTGGAAAATTCATGACATTGGTG GCCACAAATGTGGCAGCTAGGGGTCTGGATATCAATGATGTTCAGTTAATTATCCAGTGTGAACCTCCACGGGATGTAGAAGCATACATCCATCGTTCTG GACGTACAGGAAGAGCTGGTAATACTGGAGTTGCTGTAATGCTTTATGATCCCAGAAAGTCAAGTGTATCTAGAATAGAGAGAGAATCAGGTGTCAAATT TGAACATGTATCGGCTCCTCAGTCTGATGATATTGCCAAAGCTGTTGGTGGGGAAGCTGCTGAATTAATTTTACAAGTATCTGATAGTGTGGTTCCTGCA TTCACATCTGCTGCTCAGGGGCTTTTGAATAACAGCGGTTTATCAGCTGTTGAATTACTTGCAAAAGCTCTAGCCAAGGCTGTTGGTTTTACTGAGATAG TGAAAAGATCACTTCTGACTTCCATGGAGAATTATGTCACATTACAGCTTGAGATTGGAAAACCTATTTTCACCCCATCTTTTGCATTTGGAATCCTGAG GAGATTCGTGCCGGAGGAGAAGGTTAACACAGTGCAGGGTCTTACTATCACTGCAGATGGAAATGGTGCTGTTTTTGATGTACCAGCAAAAGAGTTAGAT GCATTTATTACTGGTCAGCAAAATGCTGCTAATGTAAGTCTGGAGGTGGTGAAAGCATTGCCGCAGTTGCAAGAAAGAGACCAGTCAAAAGTGAGCAGAT ATGGTGGTGGAGGTCGTGGGTTTGGTGGAAATAGATTTGGTGGAAGAGGAGGTGGCAGGAATAGTAGATTTTCAGGTGGTTACGGTGGTGGTAGAGGCGG AAAGAGATGGTAAAGGAGTTAGTGAGATGATGGTTCATGAGCCCCATATCCGTGAGCTTAATTTTTAACCTATAGTTTGTTATTTGTGTTGAACTATTAT TAATCCCATTTATCTCAATTTTTACATGAACATGTAAGAATTGAATTTCTATAGGATTGACAATGATAATGAAGAAAAGAGAAATATTTATTTTGCCATT TGTTTCACCGCCAAGTTTCTATACTAACATGGTTTGTTATAATTCCTC
• Tissue: flowers
• Gene name: LI_gene_78145;
• Additional information: details;

Expression of Ll_transcript_5924

FPKM

• FPAB: 27.4
• FPNAB: 46.4
• LF1: 26.4
• LF2: 16.8
• LF3: 21.4
• LF4: 27.2
• UF1: 24.2
• UF2: 19.6
• UF3: 26.6
• UF4: 26.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_5924

• Blastp: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 75.42% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 7 from Arabidopsis with 75.61% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (AT5G62190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449411.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;