| Id Trinity | FTRINITY_DN58573_c5_g1_i41 |
|---|---|
| Name Transcript | Ll_transcript_7535 |
| Sequence | TGAAGCTCAGGTAGGCTTTATCTCTGTCTCCCTTTCTTATAATATCTATCTATTCTATATAAGACAAGAAAACCCTCATTCTGTGAACCTTTTCGAAATT CAGAATTCTTCTCAGGGACTGCAAATTTTGTGGTTCCTTTTGACAGGTTTCGGGTGATTATAAGAAATGGCATCGGTTTCTACTCAACCTCAGTTCCGTT ACACTCAGCCACCATCGAAGGTGCTTCATTTGAGAAACTTGCCCTGGGAGTGCACAGAGGAAGAACTGATTGAACTCGGAAAGCCTTTTGGTAAAGTTGT CAACACAAAATGCAATGTTGGAGCAAATCGAAATCAAGCCTTTATTGAATTTCAAGATTTGAATCAAGCCATTGCGATGATATCATACTATGCCTCATCG TCAGAGCCTGCTCAAGTACGAGGGAAAACTGTGTATCTGCAGTATTCAAATAGGCAAGAAATAGTGAATAACAAAACTGCTGCAGATGTTGCTGGGAATG TTCTGTTGGTAACGATTGAGGGTGAAGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTGAGCAATTCCATGTGTGAATTAGCTATATGCTGAAA TTGTCATCATGAGGATGCTAGTCACTTAGTTTCGTGATTAGGTTTTTCTTTGTCAGGCAATGGAAAAACAGTTGACATGTATGTAAATGAATCAGCAGGC CCATATCAAGGCAATATCTTTGATGGCAGCTTAGTGCTTTGGGAGAAATAGCGCTTGTGTGTTCGTTTCCTTTCTCCTTTCCTTAACACTTCCTCCTTCT TCCCTATTCTCCGCTCAACTCCTACCATTCTTGTAGTTTAGGATGAAACCTTTTCTTTTCATATTTGCATCTGTATTTTTTGACTCATCTATGCATTGAT GGTCACTGGATTCTATTATGTAACTCTGTTTAGTTTTTAATTTTGTTTTGCAACTTATTTTTTGTTGTGTTTTGGATTTTCCAAGTGTTATTTCAAAGTA GGCTAGCTAAACGTTTCCTTCTTCATTTGGCAATCGAATGCCGGGTTTTCACGTAATTTATGTAGATAAAGTAATTTACTTCGCTAACCCTTAGTTTGAG TCAACTATTTCTGCTGTTAATGCCAGAATTTAATGAGAATTCTATGAAATTTGTTTTGGTAGTTTCTTGATATTCCATTTATCCTGGTCTTTGTTGACAA TGGTTTAGTTCTTCTGACACCAGTCTTGGTTTTGGTTGTTAATCTTTTATTTTTGTATCCATTAATGATGTTATTTATGCAAGTCATTGGCTGTTTTCCT ATCTTATATGTAGAAATTATAGATTTGTTCATATTTCTAGTTTTCTATGATATATATTAGAAAGCATCAGACAATGTTCATTTTGTGTTCAATCATTAAG ATTCATCTTAGTAAATATTGTGCTGAATGTTTATTATTCACTTATGCAGGTTTTTTCAGCCTTTGGTTTTGTGCATAAGATTACCACCTTTGAGAAGACA GCAGGATTCCAGGCTCTGGTGCAATTCTCAGATGCAGAGACTGCCACTTCTGCAAAGGATGCTCTGGATGGAAGAAGCATACCTAGGTATCTGCTCCCTG AGCATTTAGGGCCATGTACCCTTAAGATCACATATTCTGGACATTCGGATTTAAGTGTTAAGTTTCAAAGCCACAGGAGCAGAGATTACACTAATCCTTA CCTTCCTGTTGCTCAATCAGCCATGGAGGGAAGCGGACAGTACATGGTGGGTTTGGATGGGAAAAGACTGGAGGCTGAGAGTAATGTTCTTCTTGCATCA ATTGAGAACATGCAGTATGCTGTAACGTTGGATGTCTTACACATGGTTTTCTCTTCTTTTGGGCCTATCCAAAAAATTGCAATGTTTGACAAGAATGGTG GTTTACAGGCTCTGATTCAATTTCCAGATGTTCAGACAGCTGTTACCGCCAAGGATGCTTTGGAAGGACACTGCATATATGATGGAGGGTTTTGCAAGCT TCACATCTCATATTCGCGCCATACTGATCTTAGTATAAAGGTCAACAATGATAGGAGCAGAGACTATACCATTCCTCTCACACCTGTTGTAAACGTCCAA CCATCAATTTTAGGGCAACAGCCTGTTCACAATCCCATGATGGGTCCTCCAGCTCAACAGCAATACAATCCATACCCTCCAATTTCCGAGCAGGGTCTGA TGCCTCAATCTCAGCCTGGATGGGGAGCAGCTCCATCAGGACCACCACAGTCTATGCCAATGCAGATGCATAACAATGTTTACATGCCGCCTGGAACTAT GGCGCCTGGAATGCCATTTCCAAGTCACGCCGCACAACAACCCGCATCGGCAATGTCCCCATATGGACCTGGTCGCAATCAATAGCATGCATCTTTTATA TCTCAAATGGATGAACATTTGTTAAATCAGTTCAGCAGGTTATGCTGAAGTGAAACTTACCGTTTAAATTTGGGTACCCATCTGGTGAAACTGGCCATTT AAATAGATTTTGAATGTGAAAAGTATGAGCAATTGTTCAGGAACTTTTAGTTGGCGCCTGACTTTGAAACAAACTGTTCAATTTTGTTCTACTTTTGTTA TTGAGACTTGAGATGTTCAGTTTTAGTTAATAGTTTAAACTTTTCCTTATTGATTTTTAATGATTAATAATGATAAAAGTCAGCGATTAAAAATGTCATT TTAGCACATTCGGGAGCTTTTCATACCATAAGAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78193; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7535
| Blastp | Polypyrimidine tract-binding protein homolog 2 from Arabidopsis with 84.06% of identity |
|---|---|
| Blastx | Polypyrimidine tract-binding protein homolog 2 from Arabidopsis with 83.33% of identity |
| Eggnog | polypyrimidine tract binding protein(ENOG410XPMZ) |
| Kegg | Link to kegg annotations (AT5G53180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415484.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |