| Id Trinity | FTRINITY_DN58579_c0_g2_i19 |
|---|---|
| Name Transcript | Ll_transcript_7246 |
| Sequence | CTTTACTTCAAATCTTTTCGGCTCAGACGTAACCGTTTTTATCTCACGCGATTTCCGCTTCGATAAAATCCCCTCCCATTTCCTTACTCAGTGATCACCG ATAATATAATATCATGTACTTTCTCCGAATCACCACCGCTGTTCACGGTTGCGCCGCCGTCAAATTTAACAACGACTCCGCAATATAAAAAAGAACATAT TCCACATGCATCCTTTCTGCTGCGTTTCCGCGGTTTCCGATCAGTCTTCACCAGTGAAACCCTCACCGAATCCTTTCTCTGACTTCACCTCCACCATGCC ACCTCTTCCTTCCACCGCCGCCGCAATTAGATCCGACGCGATCCCTCGCGTCAGCCATAACCACAGTCACGGCAGCATCCTCTCCGTCGATTACACTCGC CTGAGTCAGCGTGAACAGAAGCAGCTTCCGGCGGTTGTGGTGACGGATGTGAAGATCAACGACCTCGTCGGTGATGGAATCTCCGGGATACTTTACAAGT GGGTGAATTACGGTAAAGGATGGAGGCCTAGGTGGTTCGTGCTCCAAGACGGTGTTCTCTCTTACTACAAGATTCACGGTCCAGATAAGATCATCGTCAA TCTCGAAACCGAGAAAGGATCCAAAGTTATTGGTGAAGAATCAATGCGCAGAATCTCTCATAATAGCAATTCATATTCTTACCAAAACCGTCGCAAACCC TTCGGTGAAATCCACCTTAAGGTTTCGAGTATTCGGGAGAGTAAATCGGATGATAAGCGATTTTCGGTATTTACGGGAACGAAGAGGATGCATTTGCGGG CGGAGACACGGGAAGATAGAGTGGCATGGATGGAGGCATTGCAGGCAGTGAAGGATATGTTCCCTCGTATGTCAAACAGTGAGTTGATGGCTCCAGTGGA CAATGTAAAGGTTTCAACTGAGAAACTGAGACATCGGCTTCTAGGAGAGGGGGTGAGTGAGCCAGCAATTCAGGACAGTGAGCAAATTATGAGGACTGAG TTTGCAGCCCTGCAAAACCAGCTTGTGCTTCTTAAGCAGAAGCACTCCATCTTAATTGATACTTTGCGTCAATTAGAGGTACATGTAATGAGAAAGTAGC ATTTTTTTTGTTCTGGTGAAAAGTACTGTTACTGTAGCTCATAAGCTCATTTTGGAGAAGTGCAGCTATGCCACGATAATGAATAAAGTGGTGTATCATT TTGTCAAATTTCTCCCTTCGAACACAATCAGACAATCAGTATCATGTCCTGTATTCAAAATTTGAATCTGTACATACTGATATAGTTGCCTCAGGTAGGA TCTGGTATCTATTTCATATCGTGTACAAAATATAAATCTTAAGTCAATAAAGTAAGAAGTCATGGCTAATGGGTTGTTAATATAAGTTTCAAAGCTCCTT TATTTTTTTATTACTTTATTAGTTTATTATTGTGATTTGTTACTTTTATAGGCCTTATCTCTTTATATAAATTTGCATAGGCTGAAGTAAGACGCTGTCC TCTGAGACATGTCTGATGTGTTCATTTATCTTCCTCTGAATTTTTTCTACCAGTGGAAGGCCCTACAAGCGATCAACTATTTGTAAAAAATTATGTCTAA TATTGAGTTTTCTTAAATAATATGGTACATAATTACATGGTAATACATTATGGTTTTATTCTCTTTCCTTTCATTTGTGTCTTCCTTACTGAAAAATATA TTTTCTTTAATTTTGGCAAACCTGGAATTATCTTGCCTAGTTTAAGAGCCGGGTGGGTTCTACATAGGATGCTAATTTTTATTATGAAATTTCTAATTAC ATCTAGTAAATCCTGCTTTGATGATAAGTGTGTGGCTTTTAATGTTAAAATCTATCTGATTGCCAAATGTTTTCATGGTTCCCCTTGTTTAGCAAAATGG TTTCATTTGTCCACGAAGAGATTATTGTTTGATCTCTTGTTTAATGATGCTTTCTATTTTGTGTTTGGCGTATTGTTTAGGAATGTTATTTTAAATCTTC ATCTGGATTAATAAACTTGTATATACACTATTGTAGACGGAAAAGGTAGATCTCGAGAATACGGTCGTTGATGAGAGCCAAAGACAGTGGAATGATCAAG AGGCTTCCTCTACATTAAGGCAGGAAAAATTGAGTGAAGGAACTGCAAGTGATTCTGAGGATGATAATGAGAGACATGATGCTGCAGAGGAGGAAACAGA TGATGATGAGAATGCCTTTTTTTTTTTTTTTTTATTTTCTAACATCCCGTTCTTTCAGAACTAATGTGTCTGATTATAGAGTGTCGTCTTTGTCTTCAGA TAGTGAAGGGATCTATGCATTTGAATCTGATGAGGTTCTAGATCCTTCAATTACAACTGCTGTAACCATCTACCCTCGTGTTAAGCGGCGAAAGAAATTG CCTGACCCTGTAGAAAAAGAGAAAGGTGTGAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTA ACGAGCCTCTCTCCTCCCTGCAAAAGTGTTGTGAAGAAATGGAGTATTCGTATCTGCTCGACCAAGCATATGAATGGGGAAGACAGGGTAATAGCCTCAT GAGGATTCTCTATGTTGCTGCTTTTGCTGTATCTGGCTATGCATCAACTGAAGGAAGAATTTGCAAACCATTTAATCCATTACTAGGGGAAACATACGAG GCTAACTTCCCTGATAAAGGCCTTCGTTTTTTCTCCGAGAAGGTCAGTCATCACCCTATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTT GGGGGGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAATTAGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTGA ATGGAGCAAGGTTACTACATCAATTTACAATCTCATATTGGGAAAGTTATACTGTGATCACTATGGTACAATGCGTATACAAGGAAACCGAGATTACTCA TGCAGACTGAAATTCAAGGAACAGTCTATATATTGACCGAAATCCTCACCAGGTTGCTTAATATCTGTTGCATCAATTCCTTTTTCCTTTTTCCAGATAT AATAAAGCCATAAAGCCTTTTCCCTTTCCCTATTATGTTAAATTGTCTTTGCTGTTAGCTTGTGGTAGCCTTACTGTATAGACTTCATTTGCACACTTTG CATCAATTCTCGGATTTCTATTTGAAAAACATAATTTGCCTCTGCTACTAGATGGCCTTTTAGGTTGTACCATAGTTCTTGAATATATGACACTTTGTTG CACAGGATTGTCTCTTCTTAATGTGTTTTACCTGCTATTTTAGGTTCATGGTGTTGTTCTAGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78243; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_7246
| Blastp | Oxysterol-binding protein-related protein 1C from Arabidopsis with 63.81% of identity |
|---|---|
| Blastx | Oxysterol-binding protein-related protein 1B from Arabidopsis with 83.61% of identity |
| Eggnog | Oxysterol-binding protein(ENOG410XP9E) |
| Kegg | Link to kegg annotations (AT4G08180) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415356.1) |
| Pfam | PH domain (PF00169.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |