| Id Trinity | FTRINITY_DN58583_c2_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_5316 |
| Sequence | CAAGCTTCAAGATATTCAAGACAAATTAGTATAAGTCTAAATAGTATGTCTACTGAGCAAGCCTCTGTTGGGCAAGATCAAGTTCCCAATGCCTCTAATG TGGGTGAATCAAACTCAGTTCCAATTAATGTAGATGTTCCTTCGATTCAAGATGAAACTCATTGTTCAAGTCCAAATGATGCTGAAGAAGGTCAACCACA ACAAAGATCATCTGTTTGGAATCATTTTAAGAGGCAAAAGGTAGATGGAAAGTGGAAAGCAGCTTGCAATTATTGTGGCAAGCGACTATTAGGAGATCCA AGTCAAGGAACAAAACACTTGCATAATCACTTTAAAAGTTGTCTACGTCATTCAAATTCAGATATAAAGCAAGCACTTCTTAAAACTGCAAAAAAAGGGA ATGAATCTGTGTTAGTTGGTTCGTATGCATTCAACCAAGAGGCTGCAAGACACGCACTTGTGAAGATGATAATTTTTCATGAGTACCCAATGTCTATGGT TGACCGTGTCTTATTTAAGGAATTTTGTGGTGCATTGCAATCTTTATTTAAAGGAATTTCTCGCAACACGGTGAAGGGTGATATCACAAGGATGTATAAT GAAGAGAAAGTGAATATCATGACTTTAATTTCAAAAAATCAAAGTCGGTTTGCAATTACAACCGATATGTGGATCACTAGTAACCAAAACAAAGGCTATA TGGCTGTCACGGCACACTTTATTGATGACTCATGGATTCTACAAAGTCGACTTATGAGGTTCATATATGTGCTCGCTCCTCATACTAGTGAAGCACTTAG TGATTGCTTGTATGATTGCCTATTGGATTGGAACCTAGATAGGAAGTTGTCTACTCTGACTGTTGATAATTGCACTACAAATGATAGAATGATTGAGTGC ATGTTGTGTAAGATTTCACCTAGATCATTTATTTTGGGTGGACAATTATTTCACATGCGTTGTTCTGCTCATATATTGAATTTGATTATCAAGGATGGGT TGTCCGTTATCTCTAGTGCAGTAGAGAGGGTTAGGGATAGTGTTAGCTTTTGGACGGCAACTCCAAAAAGAGAGGAGAAATTTGAGGAGACATGTGAACA GTTAAGCATTCGGTATGATAAAAAGTTAGAACTTGATTGTAAGACTAGGTGGAATTCTACATTCTTGATGCTTCATGTGGCAATAATATACAGAGATGTC TTCCAAAGATTATCACTAAGAAAAAGTCAATATAAAACATTACCGAGTGAAGATGAATGGGAAATGGCCAATGAAATTTGTCAAAGGTTGAAGTTATTTT ATAATGTGACATTAGTGTTTTCAGGTACTTTGTATCAACTGCAAATGTCTTGTTTCCGAAAATTTGTCAAATCAAATTGGCATTACTTGATTGGCTTCAA TCTACTAATCTTGTTATTCAACAAATGGCTGAAGCAATGTATGCTAAATTTGATAAGTATTGGGGTGATATAGGTGCTTTGATGGCCGTTGGTGCTGTTT TAGATCCTAGATATAAACTATGTTTTCTAGAATTTTTTTTATCCCATAATTTATGGACAGCAACATGTTTCTGAAATGAACAAGGTCAAAAGTATTTGTG AAGATTTGGTAAAAGAGTATGAGCATAAAATGAAGGGTAAAGGGAGTGTTTTTTCAAGTCAAAGTCAAACTCTAAATTTAATAGATGTGGGGGTAGATGG AGTGAATATTGATTGGAGGGCAAAATATCAAAGTTTTGTTTCTGAGCAAAATATTGCTACAGCACACCGTAGGTCAGAACTAGACATATATTTAGAGGAT GGAGTATTGCCGGATCAAGGTGGAGAGTTTGACAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78286; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_5316
| Blastp | Zinc finger BED domain-containing protein RICESLEEPER 2 from Oryza sativa with 33.41% of identity |
|---|---|
| Blastx | Zinc finger BED domain-containing protein RICESLEEPER 2 from Oryza sativa with 29.3% of identity |
| Eggnog | transposon protein(ENOG410Y37V) |
| Kegg | Link to kegg annotations (4334009) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020979299.1) |
| Pfam | BED zinc finger (PF02892.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |