| Id Trinity | FTRINITY_DN58616_c5_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_177817 |
| Sequence | AATGTCTCGAACTTTCTTCTAATATATCTCTCTCCCGCGAAAACCGAAATCAGATATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCTCTAT ATAAACAAAAAAAAAAGTCCTTTTTATTTTCTTCTTTATATGCTTTTCACTTATTCATATTAATCGCTTATTTCCCTTTCAATTCTGTTTCTTTTGTTTC ATTAAATTCTTTTGCGTTTTTTTCACTTTTTTCCCTTCTTCTTCATCTTCTTCGTTGTTTCGTTTGATGGATCAAGAAGGAGGAGGATCCAACGGTGGAT CTTGTTACTACTCTGTTCTCGGGATCCATAGAAATGCCTCCTCCTCTGATATTCGCACTGCTTATCGAAAACTCGCTATGAAGTGGCACCCTGATAAATT TGCAAGAAACCCTGCTACGGTTGGAGAAGCTAAGCGACGGTTTCAACAAATACAAGAAGCTTATTCAGTTCTTTCGGATGAATCGAAGAGGTTAACGTAC GATGCGGGGCTTTATGATCCATTAGAGGAAGATAACCAAGATTTTTGTGATTTCATGCAAGAAATGATCTCAATGATGAACAATGTTAAAGACGAGGGGG ACAGTTTGGAGGATCTACAAAGGATGTTTATGGATATTGTCGGTGGAGATGATATGAACTTTGAATTGAACCAAGATCGGACGGCTGGTAAGAGAGGACG TGTTGGTGGATCAAATGGCAACGCACCTAAGCGCACCAACTCTTGCTGTTAGTCGAAGCACTGGATCCATGTGGGTCGAGTTTTACATTCCTTGAAGTTG TTAAAAAAATGAGCTCATCCCCAACCTGGTTGAGTTTCAATTTTTCACGGCCTAATCTTGCCTCAACATTCAACTTTGATCAGAACGGGAAACACATTTG TTGCCACATATTTTGTGACACTTCATATGTTAAGAGGAATGGTTATGTTATGAAGAGGAGTTGAGTGAAAGCAAGAAGTGTTGTAGTCATTGCAAAACTA CTAAAACCCCACTTTGGAGAGCAGGACCAGCTGGACCTAAGACATTATGCAATGCATGTGGAATCAGGTATAGGAAGAGAAGGGATTCTATGGTGGGAAT GAACAAAGGACATGAGAGGAAAAGAGAAAGATCAGAAACTAAATTTGATGTTGGTAGTGACAAAGATTTGAACAAGTCCTTGAAAATGAAGTTAAATGCA TTAGGAAAAGAGGTTTTGTTGCATCAATCAAACTCAATCCTTAAGAGACAAAGGAAGAACAGGTTAGGAGAGGAAGAACAAGCAGCTTTTTGTTTAATGG CATTGTCTTGTGGCTTTGTTTTTGCTTAAAATGAAACAAAGCATTGTTCTTTTGGTTTTTTCTGTCTATAAGCTAACCCCTTTTTAGGATTAAGAAGTGA TGTACCCTTTGTTTATGTTAAGAGGGTCTTTCACAATGTTCTAGTCTAGTTAAGGAGAAAGGGCTACTTACTGGTTTCCTTGCGTGTCGTTTACCGAATT TATTGTACTTACGGCACTGGTGATCGCGTACCCGTACTTTACTTACGGCACTGGTGATCGCGTACCCGTACCCGTACTTGTACTTACGGCACTGGTGATC GCGTACCCGTACCCGTACTTGTACTTACGGCACTGGTGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78634; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_177817
| Blastp | DnaJ homolog subfamily B member 6 from Silurana with 62.12% of identity |
|---|---|
| Blastx | GATA transcription factor 15 from Arabidopsis with 47.66% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (394712) |
| CantataDB | Link to cantataDB annotations (CNT0001526) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419637.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |