Ll_transcript_177848

• Id Trinity: FTRINITY_DN58616_c6_g2_i3
• Name Transcript: Ll_transcript_177848
• Sequence: CTAAAACAATGATACATCTGTATCTCATCCTAAACTTGCAATGGTCAATCTCGACATGCTCCCAGCTTCTTCATCTTCTGTATCTTGTCCTAAACAATAT GATGTTTTTCTTAGCTTTCATGGACAGGATACTCGTAATAACTTCACAACACATCTTTATGGCTATCTTCAACAAAACAATGTTAAAACCTTTATAGACT ATGACCTTGAAAGAGGACATGAGATCTCACCAGCAATCATGAAAGCTATTGATGAATCACATGTATCTATAATCATCTTCTCTCTAAACTATGCTTCCTC TAAATGGTGCTTAGATGAACTTACCAAAATTATGGACTGCCATAAATCTACGGAACAAGATGTGATACCTGTGTTCTATAATGTAGACCCTGCACATGTG AGGAAACAGGTTGGGAGTTACAAGAATGCTTTTACAAAACATGAGAAAGATATGAGACACAACATGGAGAAGGTGCAGAAATGGAGAGTAGCTCTCACTC AAGCATCCAATTTAGCTGGCTTCACATGGGACTCAAAAAGAGATAGGAACGAATTTGAATTCATTAAGGATATTGTTGGAGATGTTATGAAGAAGCTCAA TCTTAGATACCCAATTGAATTGAAGGGATTGGTTGGAATTGAGGAAAATTATGCAGAGATTGAATCATTAATGAAAATTAGACCGAGTGAGGTAGGAATC ATTGGAATATGGGGCATGGGAGGCATAGGTAAGACAACCCTTGCCACTGCTTTATATGCAAAATTGTCTTCTTCATTTCAAAGTTCTTGCTTCCTTCAAA ATGTAAGGGAAGAATTACAAAAAATGGGGCGCGATGCTTTACGCGAGAAACTTTTTTCTAAGCTATTAAAGGAGAAAAATCTTAGTGGAAATTTTGATTC CACCACACTGAGGCATAGAAAAGTTTTGATAGTGTTGGATGATGTGGCTACTCCGTTGCAATTAGATGGAATCATAGATTGCGATTGCTTCGGGTCAGGA AGTAGAATAGTTGTGACAACTAGAAATAAGCATGTGTTTAGGGATGATCATCAAATATATGAGGTCAAGGAATTAAATCATGATCATTCTCTTAAGATTT TTTGTGTAAATGCCTTTAGCTTAGAGCATCCTAAAGATGGATATGAAGAGCTAGTGCAAGTTGTGGTTGATTATTGCAAAGGCCTTCCTTCGGCTTTAAA AGTTTTGGGTCTATATTTTCATGGAAAAAGTAAAGGAGTATGGGAAAGTGATATAAAAAAGCTCAAAAAGTATCCGGATATGGATATCCATAAGGTTTTG AGATTGAGTTATGACAGTCTGGATGAGACCCAAAAGTCTATATTTCTAGATATTGCATGTTTTTTCAACAATATGGAAGAAAATATGCTGAGAACATTCT TGAAAGATTGTGGTCTTAATTCAATTCTTGGACTCAACATGCTTCTTGAGAAATCACTGGTATGTTATAACAAGACACGTATTCGAATGCACGATATGCT TGTCCAATTGGGCAAGACTATTGTTTTGGATGAATCTCCTAATGATGCTGGCAAACAAAGTAGGTTATGGTCTCAGAAGGATATTGATAAAGTAATGGGA GAAAATGAGGGAGGAAAAGAAATTCAAGGGATAGTTTTCACCTCACCAAAACCATATCTGGCAGATTGGGACGAAAATTGTTTCTCCGAGATGAAAGGTC TTAGGTTACTTGTGCTACAAAATGTGTATCTTTTACATGGTCTCAGATCTCTTCCTAGTGCATTGAAAGTTCTTGTTTGGGAGGGATATGCTATGAATGC TCTGCCACACATTGCTCAATCAAATGAACTTGTGAGCCTTATGTTGCCTTGTAGCAAACTGTCACAACTTTGGAATAACACACAGGTTTTAGGAAAGTTA AGGGTCATGGATTTGCGCCACTCCAAAGATCTGACTACAACTCCGGAGTTTGATAGAATTCCAAATCTAGAATCATTGACCCTGGAGGGTTGTGTAAGTT TAGATCAGGTTCATGAATCTCTTGGAAACCATAAGAAGCTTGTCAAAGTGGATTTCACAGGTTGCAAGAATCTAACAGCCCTGCCAAGTAAATTGTGGAT GAACTCTCTAGAGACATTAATTTTAACTGGCTGCATAAAACTTGAAAATCTTCCCGAATTTGACGAAAATATGCAAAGCCTATCAATGCTTCACTTAGAG AATACTGCTATAGCAGAATTACCTCCATCACTAGGCTTCTTAACTAGTCTTTCTGATTTGAACTTAAAGGGTTGCGAGAATTTGGTTTCCTTCCCAGATA CCATGTGCAATTTGAAGTCTTTTCGAATTCTCGACATTTCTCTTTGCTCACAAATACAAAATTTCCCAGAAAACCTGAATGAGCATGTGCATTTGGAAGA GCTTCATGCTGGTGCAACTGCTATAACAGAAATACCTTCATACATTAATGAATTCAAGAACCTCAAAATATTATCATTTCAAAGATGCAAAGGAACACAT TCCATATCATTCACCTTACCCCTCCCATTGCCTCCTTCATTCTCAGGTCTCTCCCTATTGACAGAATTGGACTTAGCTTTCTGTAATCTCCACGACGAAT CGATCAATAGTGATTTTAATTGTTTGTCATCGTTGTGGAAGTTGAATCTAATGGGAAATCATTTTGTTAACCTTCCTCTTGGATGCATGTCTAATCTTTT AAAGCTAGAACAACTTAACTTGAGTTACTGCTTTTGGCTTCAGTCCCTACCACAGATTCCACCAAAACTACATCAATTTTTTGCAACACATTGTTGTTCT TTGAAACCTCTATTAGACCAGCAACTGTGGAATCTCTTTGCATCACATCACTTCCAGAGTTACAGCACACCAAATTTTGCTGCAGATTTTATCTTTCTAA TGCATGGGGACGAAATTCCGTCGTGGTTTCTGAACAGAACGTATCATTGTGAAGACTCGGTACAGTCGATCTGTAATAAAAGTATATCAATAACAATGGA GATTCCTCATGACAATTCTCCTGTCTGGTCAGGAATTGCTGTGTGCCTTGTGTTGGAAGAATTGTTACCTGAATCAATGTGTTTACGTTCCGTTTATTGG TATTTTAGATCTCCTGAATATGAAGGGTACACAAAAAGAACATATTTCAAGTTTTATGATGGAAGTGAAAATAGTAAGCTTTTCATTGCATTTTTTCCGT TCACCGACTTCAATTGTTGGCGGCATTTAAGAGGGGGGCTGAACCAAAGGCTTCAATTGACAATGTATTGTAAGAATGAAACTACATTGAATGGTGCTCC ACTTAGTCCTGAAGAGGAGGATGGTGTGGTAGGAATAAGGGGTTGTGGTTGGCGTTTATTATCTAAGCAAGACTTTGAAACTTGGCACAAAACAATGGGT GATTGCACTGCTAGTACTAGTGCTAGTGCTAGTGCTGGTGCTAGTGCAGAGATTGAGGTTATTTCTTCTAATGTGATCCAGAATGAAAGAGTGAGTGAGA TTAGCAATGGAAATAATGAATGCCAAGATGAGATTGAGGGAGAATATGAAAATGAAACAGAAGAACCAAAATCCTTTTTCAGAACATGTTTTACATTGTT CATGACATTTTGTGACAAAAGAAGGATGGTTTCAGATGAGAACTAAAATGTTTCATGCAGGCTATCAACATATATAAGAAAGGGTCCTGAGTTTTTTATG AAGATTTCTTAGGAGCAAGCAAGATTTATAATGCATGCAGTGATTACTAAAATTACATTTTTATCCTTGTAGAGAAATATAGATTTACTCCTTCGTTAAC GTAGAGAATACTTATTCAAATATCCAATACATCCTCAAAACTCATCATCTCTTACCCTCACACATATGATAACATGACAAATTCTTTTCTATTTATTTTT TAACATTTATTTAGAAAATCTGTTACCTATATAAGAAAAAGTGTTACTCAATGAGTGTCAACCTCTCAATTAAATTTTTTCATCCAAAACATGTTCATGT TATATTTATACACATTCTCAC
• Tissue: flowers
• Gene name: LI_gene_78638;
• Additional information: details;

Expression of Ll_transcript_177848

FPKM

• FPAB: 1.2
• FPNAB: 0.7
• LF1: 0.4
• LF2: 0.4
• LF3: 0.4
• LF4: 0.5
• UF1: 0.3
• UF2: 0.3
• UF3: 0.3
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_177848

• Blastp: TMV resistance protein N from Nicotiana with 37.01% of identity
• Blastx: TMV resistance protein N from Nicotiana with 36.82% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442214.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;