Ll_transcript_177850

• Id Trinity: FTRINITY_DN58616_c6_g2_i4
• Name Transcript: Ll_transcript_177850
• Sequence: ATTCGTTTCTCTCTCTTATTCCTATAAAACCAAAGCTGGTTTCAGCTTACTTTTCTACATATACAACAAAAGCTTAATCTATCATCACTGAGAACCACAC AAACACTTGATAGCTTCCAATGGCACTTAGTGTTGCTTCTCCATCAACTAACTCAACTCCAATAAGGAAGTGGAAGTATGAAGTTTTCTTGAGTTTTAGG GGAACAGACACACGTTTTGGCTTCACAGACCACTTATACAATGGTTTGAAGAATAAAGGGATAGTTACTTATAGGGACAGAGAAGGACTTGAAAGAGGAG AAGTTATTTCAACAGAACTGTTCAAAGCAATTGAGGAATCCTTGTGTGCAGTAGTGATTCTATCTGAAAACTATGCTTCTTCAACATGGTGTTTGAAAGA GCTGAAGAAAATACTTGATTCTAAACACAACTTGGGTCAACATGTTTTGCCTATATTTTATGGTATTGAACCATCTGATATAAAGAGGCAGAAGGGTAGT TTTGAAGAAGCATTCAAGATACATGAGAGAAGATTTAAGGATGATAAACAAATAGTGCGGGATTGGCGTGCTGCTTTAGCTCAAGTTGCTGACTTAGCGG GCTTGAGTTCCATTCATTGTTATGAAACAGAACTCATTGAAAACATTGCTGAAATAGTATGTACCAAATTACTTCCAAGAATGTCATTCAGCTTTGATGG GTTAATTGGAATTGGTTCAAAAGTTGCAGAAATGAAATCACTTTTAGAGATGGGATCAGAAGATGATGTTTGTTTTGTTGGAATATGGGGCATGGGTGGA GTAGGTAAAACAACTCTTGCTAGTGTTGTCTATGAAGGGATCCGAAATGAATTTGAAATTAGTTGCTTTGTTGCAAATGTTAGAGAGGATTCTGAGAAAT ATGGTTTAGCTTATTTACAAATGGAACTTCTTTCTCCTCTCAAACATAGAAAGTTTGAAATAAAAAATGAATATGAAGGGAGGGAGAAAATAAGGCACTT TTTAAGCCATATGAAAGTTCTTATTGTCCTTGATGATGTTAGTGACAAAAGGCAACTAGACAATTTAGTTGGAAAACATGAGTGGTTTGGTAAAGGAAGC AGAGTAATTATAACCACAAGAGATAAGCACTTGCTAACACCAAAAAGACTATTCAGGAATTATGATATTGAAATGTTGAATAGTGATGAATCACTTAAGC TCTTATGTCTAAATGCATTTCATAATGATCAACCTGAAGCTGGTTTTTTGGATTTGTCCAAAGGTATATGTAACCTTTGTGGAGGGCTACCTTTAGCACT TGAAGTGATGGGCTCATTTCTTTGTGAAAGGAGTGAACTTGAATGGCAAGATGCTTTAAATAGGATGGAACAAAATGAAGGAGATGGTGATGTTATTCTC AAGACATTGCAGATAAGTTATGATGGATTGAGAAAGGGAGATAGAGCTATATTTCTAGATATTGCATGTTTTTTCAACAATATGGAAGAAAATATGCTGA GAACATTCTTGAAAGATTGTGGTCTTAATTCAATTCTTGGACTCAACATGCTTCTTGAGAAATCACTGGTATGTTATAACAAGACACGTATTCGAATGCA CGATATGCTTGTCCAATTGGGCAAGACTATTGTTTTGGATGAATCTCCTAATGATGCTGGCAAACAAAGTAGGTTATGGTCTCAGAAGGATATTGATAAA GTAATGGGAGAAAATGAGGGAGGAAAAGAAATTCAAGGGATAGTTTTCACCTCACCAAAACCATATCTGGCAGATTGGGACGAAAATTGTTTCTCCGAGA TGAAAGGTCTTAGGTTACTTGTGCTACAAAATGTGTATCTTTTACATGGTCTCAGATCTCTTCCTAGTGCATTGAAAGTTCTTGTTTGGGAGGGATATGC TATGAATGCTCTGCCACACATTGCTCAATCAAATGAACTTGTGAGCCTTATGTTGCCTTGTAGCAAACTGTCACAACTTTGGAATAACACACAGGTTTTA GGAAAGTTAAGGGTCATGGATTTGCGCCACTCCAAAGATCTGACTACAACTCCGGAGTTTGATAGAATTCCAAATCTAGAATCATTGACCCTGGAGGGTT GTGTAAGTTTAGATCAGGTTCATGAATCTCTTGGAAACCATAAGAAGCTTGTCAAAGTGGATTTCACAGGTTGCAAGAATCTAACAGCCCTGCCAAGTAA ATTGTGGATGAACTCTCTAGAGACATTAATTTTAACTGGCTGCATAAAACTTGAAAATCTTCCCGAATTTGACGAAAATATGCAAAGCCTATCAATGCTT CACTTAGAGAATACTGCTATAGCAGAATTACCTCCATCACTAGGCTTCTTAACTAGTCTTTCTGATTTGAACTTAAAGGGTTGCGAGAATTTGGTTTCCT TCCCAGATACCATGTGCAATTTGAAGTCTTTTCGAATTCTCGACATTTCTCTTTGCTCACAAATACAAAATTTCCCAGAAAACCTGAATGAGCATGTGCA TTTGGAAGAGCTTCATGCTGGTGCAACTGCTATAACAGAAATACCTTCATACATTAATGAATTCAAGAACCTCAAAATATTATCATTTCAAAGATGCAAA GGAACACATTCCATATCATTCACCTTACCCCTCCCATTGCCTCCTTCATTCTCAGGTCTCTCCCTATTGACAGAATTGGACTTAGCTTTCTGTAATCTCC ACGACGAATCGATCAATAGTGATTTTAATTGTTTGTCATCGTTGTGGAAGTTGAATCTAATGGGAAATCATTTTGTTAACCTTCCTCTTGGATGCATGTC TAATCTTTTAAAGCTAGAACAACTTAACTTGAGTTACTGCTTTTGGCTTCAGTCCCTACCACAGATTCCACCAAAACTACATCAATTTTTTGCAACACAT TGTTGTTCTTTGAAACCTCTATTAGACCAGCAACTGTGGAATCTCTTTGCATCACATCACTTCCAGAGTTACAGCACACCAAATTTTGCTGCAGATTTTA TCTTTCTAATGCATGGGGACGAAATTCCGTCGTGGTTTCTGAACAGAACGTATCATTGTGAAGACTCGGTACAGTCGATCTGTAATAAAAGTATATCAAT AACAATGGAGATTCCTCATGACAATTCTCCTGTCTGGTCAGGAATTGCTGTGTGCCTTGTGTTGGAAGAATTGTTACCTGAATCAATGTGTTTACGTTCC GTTTATTGGTATTTTAGATCTCCTGAATATGAAGGGTACACAAAAAGAACATATTTCAAGTTTTATGATGGAAGTGAAAATAGTAAGCTTTTCATTGCAT TTTTTCCGTTCACCGACTTCAATTGTTGGCGGCATTTAAGAGGGGGGCTGAACCAAAGGCTTCAATTGACAATGTATTGTAAGAATGAAACTACATTGAA TGGTGCTCCACTTAGTCCTGAAGAGGAGGATGGTGTGGTAGGAATAAGGGGTTGTGGTTGGCGTTTATTATCTAAGCAAGACTTTGAAACTTGGCACAAA ACAATGGGTGATTGCACTGCTAGTACTAGTGCTAGTGCTAGTGCTGGTGCTAGTGCAGAGATTGAGGTTATTTCTTCTAATGTGATCCAGAATGAAAGAG TGAGTGAGATTAGCAATGGAAATAATGAATGCCAAGATGAGATTGAGGGAGAATATGAAAATGAAACAGAAGAACCAAAATCCTTTTTCAGAACATGTTT TACATTGTTCATGACATTTTGTGACAAAAGAAGGATGGTTTCAGATGAGAACTAAAATGTTTCATGCAGGCTATCAACATATATAAGAAAGGGTCCTGAG TTTTTTATGAAGATTTCTTAGGAGCAAGCAAGATTTATAATGCATGCAGTGATTACTAAAATTACATTTTTATCCTTGTAGAGAAATATAGATTTACTCC TTCGTTAACGTAGAGAATACTTATTCAAATATCCAATACATCCTCAAAACTCATCATCTCTTACCCTCACACATATGATAACATGACAAATTCTTTTCTA TTTATTTTTTAACATTTATTTAGAAAATCTGTTACCTATATAAGAAAAAGTGTTACTCAATGAGTGTCAACCTCTCAATTAAATTTTTTCATCCAAAACA TGTTCATGTTATATTTATACACATTCTCAC
• Tissue: flowers
• Gene name: LI_gene_78638;
• Additional information: details;

Expression of Ll_transcript_177850

FPKM

• FPAB: 3.3
• FPNAB: 1.3
• LF1: 0.2
• LF2: 0.3
• LF3: 0.1
• LF4: 0.3
• UF1: 0.1
• UF2: 0.1
• UF3: 0.6
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_177850

• Blastp: TMV resistance protein N from Nicotiana with 36.74% of identity
• Blastx: TMV resistance protein N from Nicotiana with 36.74% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417571.1)
• Pfam: TIR domain (PF01582.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;