Ll_transcript_176885

• Id Trinity: FTRINITY_DN58624_c2_g1_i1
• Name Transcript: Ll_transcript_176885
• Sequence: TTAGTCCCACTAGGTGTGATAATAATCTATGGGGACTGAAAATCCTGGTCGTCCGAGCTTCCCTGCAAGACCTGCTTCCTCACCTTTTGCTGCTGCACAG ACTATGACACCTTTTTCATCAACCGGCCCGGCAGCTGGATCAGAGCCTACTTCTTTCCAACCTACTCCTGTGCCTCCTCAGATGTCTACGCCGTTTTCAT TATCAGGAGGACCTGTGGTGAGACCAGGGGTACCGGGGTTTAGGCCTGGACTACCTGGCAGGTTCAATGACCCATCGGCACCTCCTCCTCCTTTTCCCCC AACGTCCAAGGTCCTCCCACCTGGTGGATCTTTCCAGCGTTATCCAGCACCACAGTTTTCCACAACGTCACCGCAAGCACCTCTGCCACATGCTCCACCC ACGATGGGGCAACCATCATTTCAACATTCTGCAATTCAAGCACCATCTTTTCCAGCATCACTTCCTCCTCAGTCGCATACACCTTTTGTTCCAATGGGGT CTCCCCCACCAAGTGCCACTCCTGCACCTTTGGGTTCAAATGGTCCTCCTCCCGTGTATCAGCCATCTTTTCCAGGATATGCCCGCCCTCAGGCTGGTCA AGAAATGCAAGCTCCTCCACCTATGCATTCCTCTTTCCCTGCTAATCAAGGAAATTATGGACCTGTTCCGCCTGCAGCATCTTCTCCTTTTCTACCTCAT CAAAGACAAGGAGGTTATGTTTCATCGCCCTCAGTTGGTGCTCCACTAGGCATGCATCCAATGCAGCAGCCAGGATCTGGACCCCCTATTGGTGCCGTTC AGGGATTGGCTGAAGACTTCAGCTCGCTCACAATGCAAACTCGTCCTGGAACAATGGATCCATTATTTGATGCTAAAGAACTTCCAAGGCCATTGGATGG TGATGTGGAACCAAACAATTTAGTTGACATGTATACTGCAAACTGCCATCCTAGATTTCTTCGACTCACAACCAATGCTGTTCCTAGCTCCCAGTCCTTA GCTTCTAGGTGGCATCTGCCTCTTGGAGCAGTTGTATGCCCACTTGCAGAACCTCCTGAAGGGGAAGAGATACCTATAGTTAGTTTTGCACCAGCTAGTG TTGTACGCTGTAGAAGATGCCGTACATATGTGAATCCATATATGACATTTACTGAAGGCGGAAGGAAGTACCGCTGCAATGTCTGCACCTTGCTTAATGA TGTCCCTAGTGAATATTATGCGCAATTGGACGCCACTGGTAAAAGAGTTGATTTGAATCAACGACCTGAGCTGACAAAGGGTACCGTAGAATTTGTTGCC CCCGCTGAATATATGGTGCGACCTCCAATGCCCCCGGTATATTTCTTCCTCATCGATGTTTCCATATCTGCAGTTAGAAGTGGCATGATTGAGGTCGTGG CCCAAACAATAAAGTCATGCTTAGACGAGCTGCCGGGCTTTCCAAGAACTCAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTCTACAATATGAA GTCATCCTTGACACAGCCACAGATGTTGGTGGTCTCAGATTTGGATGACATATTTATTCCGCTGCCAGATGATCTTCTTGTTAACTTGTCTGAATCAAGA AGTGTGGTAGAAACCTTCCTAGATAGTTTACCATCTATGTTCCAGGACAATGTTAATTTGGAATCAGCTTTCGGTCCTGCTCTTAAAGCTGCATTTATGG TTATGAGTCAACTTGGAGGGAAATTGCTGATTTTTCAAAACTCACTCCCATCTCTTGGTATTGGCCGCTTGAAATTACGTGGAGATGATTCTCGTGTTTA TGGGACAGATAAAGAGCATGGGTTGAGATTGCCGGAGGATCCATTTTATAAGCAAATGGCTGCTGAGTTTTCTAAATACCAAATCTCAGCGAATGTGTAT GCATTCAGTGATAAGTACACAGACATAGCGTCCCTAGGAACTCTGGCAAAGTATACTGCCGGTCAAGTGTATTACTATCCAGCTTTCCAATCAGCCATTC ATGGGGAGAAATTGAGATATGAGTTAAGAAGAGACCTTACCAGAGAAACTGCATGGGAAGCTGTAATGCGCATTAGATGTGCAAAAGGTGTTCGCTTCAC AACTTATCATGGAAATTTTATGCTAAGGTCCACTGATTTGTTAGCACTTCCAGCTGTAGATTCTGATAAAGCCTTCGCCATGCAGTTATCTCTTGAAGAG ACACTATTGACCACTCAGACACAATATTTCCAAGTTGCGTTGCTATACACTGCATCTTGTGGAGAAAGGCGTATCAGAGTACACACAATGGCAGTTCCAG TAGTTACAGACTTGGGAGAGATGTATCGCCTGGCTGATACCGGTGCAATTGCATCTTTGTTTAGCAGGATAGCAATTGAGAAAGCGTTGTCCCATAAACT AGAAGAAGCACGAGGTGTTGTGCAACTAAGAATCGTGAAAGCCCTCAGAGAATATAGAAATCTGCATGCAGTGCAACACCGCTTGGCCAACAGAATGATA TATCCTGAGTCCTTAAAGTTCCTTTCACTGTATGGATTGGCTCTTTGTAGATCAATGGCTCTCCGTGGAGGGTATGGAGATGTTCCATTGGATGAACGAT GTGCAGCAGGACACACAATGATGACTGTACCAATAAAAACACTGTTGAAACTTCTCTACCCTAGCTTGATTCGAGTTGATGAATATCTCCTGAAGGCATC TGTACTGACTGATGACTTGAGAAGTATTGAGAGAAGGATACCTTTGACTGGTGAGAGCTTGGATTCTAGGGGTCTTTATATATATGATGATGGCTTCCGG TTCATTATATGGTTTGGTAGGGTGATTTCACCTGATATAGCTAAGAATTTACTCGGGTCAGACTTCGCAGCAGAATTATCGAAGGCTACTCTCAATGAGC ACGATAATGAAATGTCAAGGAGGTTGATGAGGGTACTCGAGAAATTAAGAAGTACTGATCGTGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGGTGA ACAACCCAGAGAAGGGTTCCTCCTTCTTGCAAACCTTCTTGAGGACCAGATGGGTGGTAACAGTGGTTATGCTGATTGGATGCTGCAGATATCGCGACAA GTGCAGCAATCCTAATACATAGGTACTGATTGCGATATTTTATCAGCAACTTTAAGCTAAACCTGGAGCATTTTACAACTGCGATCAATGGACACTGCAT TATCCGTTATGATATCTTATTGAATGTTCGGTTCCACTAGTAAAATAAATATTGCGTTTCTAGCTATTGTCCTTAAAGATTAAGTGAAACTTTCTGTTTG TTACAGTGGCTTGAAGGCAAGGTGTGTATTTAATGATAATGTGAGCTATTATTTATTCTGACATGATCATATATCCACTTTATATACTGATTTGCCTTTG ACAGCTTCCCTTTATAAATAAGCAGGGTTTGTGCCGGGCTTGCGACTCACAAGTGAGGGCCATCACTTTCTACATTGGTAATAAATTGAATCGAGCCTCG GCGGTGCATCGTGAATCATGGATTCTTGACATGGCTAAATTGGTCGCGATTGAAGAGAAGGATGCTTTAGGTATGCTGTTGATTCATCCTGGATGTATGA ATTAGGTGAACTTTACCAAAGTGATTAAGATCAAACATGCTTTTGCTGTCTTATAGAGAGAAAGAACCAATTATTTGTTAGTTTTCCACGTGATTCATGT TGATTCATGTTTTGTTTTGTTGTTATTCTCATGGGTGATTCATTCATTCATTGTAGAAAATGAAAGTACCCAGATAGAAGAGAGAAGTGATGACATTTCA GATCAGTTGAATTTTGTTTGCTCACTATTATATTTCTGATTCTGGTATTTATTTTTATGTTAAAAACAATTTTGCACATTTAATTGAAGTTTACATTTGT TGATATATAGTTCAAAAACTGAGTAAATATCAAACCCTTCCTTCAAATGTAAACTGATACCAAACCCTTCTTCAATAAAAAATTTAGTTGGATGAAGGTA GACTCTAA
• Tissue: flowers
• Gene name: LI_gene_78715;
• Additional information: details;

Expression of Ll_transcript_176885

FPKM

• FPAB: 0.9
• FPNAB: 0.4
• LF1: 0.3
• LF2: 0.9
• LF3: 0.3
• LF4: 0.2
• UF1: 0.4
• UF2: 0.4
• UF3: 0.3
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_176885

• Blastp: Protein transport protein Sec24-like At3g07100 from Arabidopsis with 64.43% of identity
• Blastx: Protein transport protein Sec24-like At3g07100 from Arabidopsis with 66.63% of identity
• Eggnog: SEC24 family, member(COG5028)
• Kegg: Link to kegg annotations (AT3G07100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440625.1)
• Pfam: Sec23/Sec24 zinc finger (PF04810.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;