| Id Trinity | FTRINITY_DN58624_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_176888 |
| Sequence | GGCGTGAGTAATTAATCCTCTGACCAGATCAACTCGAATTGAACTTCTTTCTATTCTTCGAACTTCGATCTTCACTTCAACTCTCATAGTTCCTTTTCGC TATCTCTCAAATTTGCATTCTATAGCAGTTGTATTTAATGGAACTATTGCTATAAGTGACAGTATTATTGTGTAAAGTATGGGAACTGAAAACCCCGATC GTCCAACTTTCCCTTTAAGACCACACACTGTCACACCTTTTACACCAACTGGATCACAACCCCCTCTTCTCCGCCCCACTCCTCCATTCTCCTCCGCAAC CGTATTGCCTTTTAGACCTCCGCCACCGTTCCAAATTAATTATCCCTCTGTTCCTCCTTCTCCTCCGATTACATTTAATGCCCCACCCACTCATGCACCT TCCCACCGTTTTCCAACCCCACCGCAATTTCCATCCACCGTTCAAACACAACCACCGCCACGTGTTCCACCCTTTGGACAGCCATCATTTCAACAAACTC ACCCTCAGCCACAAACACAAACACCTTTTGCTCCGAATGTTCCTCGTCCCGTGCTTCACCCGTCTTTTCCTGGATATGCTGCTACACAAACTGGTGCAGA ACTGCAAGCTCCACCTGTTCATTCTTCTCTAGGGGTTTATGCACCTGTCCCAGCGTCTTCGCCTTTTTTATCTCGTCAACGAGGTAATGTTCTGCCGCCA CCAGTGGCTGCTCCGTCAGGCGTCCAACCGCGAATGCAGCAGCCCGGATATGGGCCGCCTACAGGTGTTGTCCAGGGCTTGATAGAAGACTTCAGTTCAT TCTCAATTCAAACTCGCCCTGGTCTCGCGGATCCATCGGTTGATACTAATGAATTGCCAAGGCCACTGGATGGTGATGTGGAGTCGGATTCGTTGGCTGA GATGTTTCCCATGAATTGCAATCCCAGGTATATGCGATTTACGACCAATGCAATACCGAGCTCCCAGTCCTTAGCTTCTAGGTGGCATCTTCCTCTTGGA GCAGTTGTATGTCCGCTTGCAACACCTCCTGATGGGGATGAGGTGACTGTAGTTAATTTTGCTCTGGGTGGTGTAGTACGCTGTAGGAGATGTCGTACAT ATGTCAATCCATATATTACATTTACAGATGGTGGAAGAAAGTACCGCTGCAACATATGTGCCTTGCTTAATGAAGTTCCTAGTGAATATTATGCACAATT AGATGCCACTGGCAAAAGGGTTGATTTGAATCAACGACCTGAGCTTACAAAGGGTACCGTGGAGTTTGTTGCCTCAGCAGAATATATGGCGCGGCCTCCT ATGCCTCCAGTATATTTCTTCCTCATTGATGTTTCCATTTCTGCAGTTAGAAGTGGAATGATTGAGGTTGTGGCTCAAACAATCAGGTCATGCTTAGACG AGCTGCCCGGTTTTCCACGAACACAAATAGGGTTTGCAACTTTTGACAGCACAATACATTTTTATAATATGAAGTCATCCTTGACTCAGCCTCAGATGTT GGTAGTCTCAGATCTGGATGACATATTTGTTCCACTGCCAGATGATCTCCTTGTCAACTTATCAGAGTCAAGAAATGTGGTGGAAATCTTTCTAGATAGT CTACCATCCATGTTCCAAGACAATGTGAATCTCGAATCTGCTTTTGGTCCTGCACTTAAGGCTGCATTTATGATCATGAGCCACCTTGGAGGGAAATTGT TAATTTTTCAAAACACGCTGCCATCTCTCGGCGTTGGTCGCTTGAAATTACGTGAAGATGATTCTCGCATTTATGGCACCGATAAAGAACATGTGTTAAG ATTGCCAGAAGATCCATTTTACAAGCAAATGGCTGCTGAGTTTTCTAAATACCAAATCTCAGTCAATGTGTATGCATTCAGTGATAAGTACACTGACATA GCCTCCTTAGGAACTCTGGCAAAGTATACTGCTGGTCAAGTGTATTTCTATCCAGCTTTCCAATCAGTCATTCATGGGGAGAAACTGAGAAGTGAATTAA GGAGAGACCTTACCAGAGAAGTTGTCTGGGAAGCTGTAATGCGAATTAGATGTGCAAAAGGTGTCCGTTTCACAACTTATCATGGAAACTTTATGCTAAC ATCCACTGATTTGTTAGCACTTCCAGCTGTTGATTGTGATAAAGCCTTTGCCATGCAGTTATCTCTTGATGAAGCATTGTTGACAACTCAGACAATGTAT TTCCAAGTTGTATTGTTATATACTGCATCGTGCGGAGAAAGGCGCATCAGAATACACTCAGCAGCAGTTCCAGTAGTTACAGACTTGGGAGAGATGTATC GCCTGGCTGATACCGGTGCAATTGCATCTTTGTTTAGCAGGATAGCAATTGAGAAAGCGTTGTCCCATAAACTAGAAGAAGCACGAGGTGTTGTGCAACT AAGAATCGTGAAAGCCCTCAGAGAATATAGAAATCTGCATGCAGTGCAACACCGCTTGGCCAACAGAATGATATATCCTGAGTCCTTAAAGTTCCTTTCA CTGTATGGATTGGCTCTTTGTAGATCAATGGCTCTCCGTGGAGGGTATGGAGATGTTCCATTGGATGAACGATGTGCAGCAGGACACACAATGATGACTG TACCAATAAAAACACTGTTGAAACTTCTCTACCCTAGCTTGATTCGAGTTGATGAATATCTCCTGAAGGCATCTGTACTGACTGATGACTTGAGAAGTAT TGAGAGAAGGATACCTTTGACTGGTGAGAGCTTGGATTCTAGGGGTCTTTATATATATGATGATGGCTTCCGGTTCATTATATGGTTTGGTAGGGTGATT TCACCTGATATAGCTAAGAATTTACTCGGGTCAGACTTCGCAGCAGAATTATCGAAGGCTACTCTCAATGAGCACGATAATGAAATGTCAAGGAGGTTGA TGAGGGTACTCGAGAAATTAAGAAGTACTGATCGTGCATATTACCAGTTGTGCCACCTTGTGAGGCAAGGTGAACAACCCAGAGAAGGGTTCCTCCTTCT TGCAAACCTTCTTGAGGACCAGATGGGTGGTAACAGTGGTTATGCTGATTGGATGCTGCAGATATCGCGACAAGTGCAGCAATCCTAATACATAGTGGCT TGAAGGCAAGGTGTGTATTTAATGATAATGGTTTGTGCCGGGCTTGCGACTCACAAGTGAGGGCCATCACTTTCTACATTGGTAATAAATTGAATCGAGC CTCGGCGGTGCATCGTGAATCATGGATTCTTGACATGGCTAAATTGGTCGCGATTGAAGAGAAGGATGCTTTAGGTATGCTGTTGATTCATCCTGGATGT ATGAATTAGGTGAACTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78715; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_176888
| Blastp | Protein transport protein Sec24-like At3g07100 from Arabidopsis with 60.63% of identity |
|---|---|
| Blastx | Protein transport protein Sec24-like At3g07100 from Arabidopsis with 69.28% of identity |
| Eggnog | SEC24 family, member(COG5028) |
| Kegg | Link to kegg annotations (AT3G07100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429006.1) |
| Pfam | Sec23/Sec24 zinc finger (PF04810.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |