| Id Trinity | FTRINITY_DN58628_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_178343 |
| Sequence | CACGATTCTACATTATCAAAACTCTCTCATACCCTCAACCCACAAAACCCTTTCACTTTCATCCTCTTCCTCACCTCAACCCTCTCATACATATTTTACA GAAAAACCCCAAATTCAAAAAAAATACACAAAATGGCCGAACCAGACTCGACAAGGTCAGTGGCGAGAATCCGACTTGGAACGACAAGTTCCTTTTCCGC GTCTCGCCGGATTTCCTTGTCTCCGAAACCTCCGGCACATTCCACGATGACCTCATCGGAACTATTCGATTCCTCATCAGCAACATCCTCGACGGTGACT CGGTGAGAGTAACACTGTGCTTCTCAGCCGTACAGTTTAGTCGGTCGTCGGGAAGGTTCCATGGTGTAATGAACATCGGAGCTATGCTGATCGACGGTTC AGAGATTCACGTGTTGAAGAAGAGATATCAGCGATAGGTTATCGTGATCTTATGGGAGAGAAGATTCAACTGAATCGGAAAAAAACCGAATCAGAGTTAG AAGAGCGAAAGCTGAAGAGTTCAAATTCAAATTCAAGCGAGAATAATTCATATGAGGGTTCTTTCACGGGGCCATTAACGGATGGATCAGAATCGACTGC AACGCCATCGTCTTCAACGTCTTCTCCTAGAACAGTGACGATGGCGTTAACAGAATGGAACGGCGTTAGGGAATTGGCGAGAGCGTGGAACAAAGGGTTA ACGACGTCAGCGTTCTTGTGTTGTTTAGTGGCTAACAGAAACAGAAACAGAACCATTCATCTAAGTCCAAGTGAACGATGAAAAATAATGAATGAAAGGG TTTCAATGAACGGTTGAGATCTTATCTTCGGCCATTACTTGTTTTTTCGCTTTCTATTGTTTCATATGCTTGTTGTAACAATGTTTCTTAATTGTTTGCC TTTCAATTCAAATTTCATTCTCATTTACCATCCCTCAAATTTAATTCGCCATGAATGACTGATATACAGAGAGCGTCTCTTCCTCACACGCTCTGTGGAC GTGATATTCTTGGTGCTGCAAAAACTGGTTCTGGAAAAACTCTTGCTTTCATTATCCCTGTGTTAGAGAAGCTATACAAAGAGAGATGGGGACCTGAAGA TGGGGTTGGCAGCATCATCATATCTCCTACCAGGGAATGGAATTAGCTGGTCAGTTGTTTGATATGCTGAAGGCTGTTGGGAAGCACCATAATTTTTGTG TTGGACTCCTCATTGGTGGTCGCAAGGATGTTGACGTGGAGAAGGAACGTGTTAATGAGCTTAACATATTGATCTGCACGCCCGGTCGCCTTCTACAGCA CATGGATGAAACTCCCAATTTTGATTGTTCTCAGATGCAGGTTTTGGTGTTACATGAGGCTGATCGTATTCTTGAAAGTGGATTCAAGAGGGAACTAAAT GCAATCATCTCACAACTACCAAAGCGCAGGCAAACCTTGCTTTTCTCAGCAACTCAAACTAAATCAGTTCAAGATCTTGCGAGGCTTAGTTTGAAGGACC CGAAGTATCTGAGTGTTCACAAAGAGTCTGTGACTACCACTCCTACTCTCTTGAAGCAAATTGTGATGGTTGTTCCCTTGGATCAAAAGTTAGATATGCT GTGGAGTTTCATAAAGACACATCTCCAGTAAAAAATACTTGTCTTTCTTTCAAGCTGCAAGCAGTTAGCTTTGCTGCATCTCCATGAGGGAGAGCGGCGT TGCAACTGGAGGATGTAGATTTAAAGACGATGGAGGGAGTAAACGCGATAGGGAGCTTCGAGGAGATGTGAATAAAAGCGATATGATTGCACTCACTATA TGCCAGATTGTTGATACCTCCATTTGAGGGTAACTTTTCAATTTCATTTTTTTATATGTTTGTATTTTATTATACTATTAGCATTCAGGAAGAAAAACTA GTAACTTGGGGAAAGTCATTTTATAATGAGAACCCTACCGACTATGCCAATCGCTGTTTAATTCAATGGCATCGTGTTAGTATCTATCATGAACGTTTGG TATTCAATTTTCTAGGTTTTTCACCTTTTTTATATTCAATTTTCTAGGTTTTTGATTATAATAATCAACTCTCTCTTATTCAGGTGGTTCATTTGAACAT GATTATTTTGATAACATTACAAAGGCATGTAGATTCAGCCATTAAATATGATTTTTGATATGTTATTTATTATTATTTTGGGTGCAACATTTAATCTTGA CATGCTTTATTGTATCTTCTCTTTAGGTTGTTGATTTTGGGCATTCCTGGTGGCAATAGAAATACTTAAATTGACAATTGACTTCCTTTCTTGTTCAATA TGATATATGATATGATTTCTACAATTATTCACAATATTGAACACTGTGAAGACCAACCAACTAGTGAGTATAAGAAACATATGTGGAGAATATCAGGTTG ATTAAGAAGAAAAATATTTGGAGGAGTCATAATATTCACAATATAGTGGAGTCAAATTTTGGGCTGTCGAAAATATTTGGTCAGACATACCTATGTCAGC ATCATTTTATTAGAGATACACATAAACAACCATGAAAGATGAACTTAGTTATTCGATAATATGAATTTTGTTTTAATATGATCTTGTACACAACTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78740; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_178343
| Blastp | DEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 72.22% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 32 from Arabidopsis with 70% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (AT5G54910) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417514.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |