| Id Trinity | FTRINITY_DN58629_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_179271 |
| Sequence | AAGACATTGAAATTTTTTAATATAACTACACTGATGCACTTCAAGTTACATTATAATTTTATCATTAAAATACATTAAGTTACCACAGAGGGAGAGGAGT CTGACTCGTTTTTTTTGTGGACACAAGACAACCCGCGAAAATCCCCGACCAATCAAAGCCCACAAAAACCTTGGAAGCTCATCCTCATTTCGCCACGTGT TCTTATCTCACTGTCTCTTTCAACCTTCAACGCCATGAATGAATGAATACTAACTAGGGTTTCACCTTCTCCTTCTCTCTCTTCACTCCTTCATTCAATG GCTTCCCTTTCTCTCTCCTTACCCGACCTCTATTTTCTCTCTCCTCTCAACCACCGCGTTTCTCTCTCCAAACCCCCCTCACGCAATTCCGTTTCTCGCA ACCCAACACAGTACTGCGGTGTCACACTTCGCACGCGAGTCCGTGCTGTGAAGGAAGAGGGAGCGGTGGTTGAAGAAAGAGTGAATGATGTGAAGTGGAG TGGGAATGGATTTGCTGGTTCAAGTGGTGGAAGTAATGGGTCAGTGAAGAGGAGTAGATTGGTGGTGAAGGAGAGTGAGTTGGTGAAGTATGTGAATGGG AACGGTGTTGCGGCGGCGAAGGGAGTTGAAGTGGAAGGTAATGCTGAAGATGGGAGGAAGAAGAGAGTGGAGGAGATTGGGAAAGAAGATGCGTGGTTCA AACAATCTGGGGAGTCACAAGTTGAGGTAGCAGCTGCACCTGGTGGTCGCTGGAGCAGATTCAAGACTTACTCAACTATCCAGAGAACATTGGAAATTTG GGGATTTGTTGTAACGTTTATCTTTAAGTCGTGGTTGAATAATCAAAAGTTTTCATATAGAGGAGGAATGACTGAGGAAAAGAAAACCTTACGGCGAAAG ATCCTTGCGAAGTGGCTGAAGGAAAGCATTCTGAGATTAGGTCCTACATTCATCAAAATTGGCCAGCAATTCTCTACGAGGGTTGACATTCTTCCCCAAG AATATGTTGACCAGCTGTCAGAACTTCAGGATCAAGTTCCTCCATTTCCCTCAGAGACTGCTGTAGCTATTATTGAAGAGGAGCTTGGATCTCCTATAGA TGGCATCTTTGATCAGTTTGACTACGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCACCGTGCGAAGTTAAAGGGACAGGATGTTGTTGTTAAAGTG CAAAGGCCTGGTCTCAAGGGTCTTTTTGATATCGATCTTAAAAACCTAAGGGTTATTGCTGAATATCTTCAAAAAGTAGATCCTAAATCAGACGGTGCAA AGAGGGATTGGGTTGCTATTTATGATGAGTGTGCCTCTGTTTTATACCAGGTGACGATATTCTGGAAAATTGCTGCAGTCTTAGTTTATTTAAGATCAAC CGAAGAAAGTCATGTCTAGCTCATATCTTTATTGGTGTAATTTTGTTTTAATGAATTCAAGCTATAAGATTGCGTAGGAAGACTACTACTTTGGAGTATG ATTTAAGTTTGGATGCATGGGATGGGTCTATCGCCTGGCTCTGCTCTTTGAAATTGCACATGTGCAAACCAAGGAAGTTCCTCTAGGTCATGGGAGACTT TTATAACAAAGCTCTAGTAAATACTTTTGAAGGTTACTTGAGAAGCTCCTTAATCACACAAAAGGACATAACGAACGGCGTTACTTCAGTTGTTTTGACA GAAGGGATAGAGTGCCCTGCAATTTATCTGGCTAGATAATGGTGTAAAATGGAAGAAAATGAATTATGATGTGTAGGCGTAGAGGCATGCTCTTTGAGTC TTTCATACTTCATCAGTTGTTTTCTAAAACAAAGAATGATATTATTACTTTGGAAGGGTTAGAGCATATATGATGCATTAATAAAGGGATTCTTGTAGCA ATTATTGCAACGGTTGGGAGGGTCGAGTTCTGGATCTTGTTCTTGTTTCCATATGATGTTTGCATGTGTTTTCTGCACAACTCTATTTAACTTGAATTAA CTATTTTCAGGAGATTGATTATACCAAGGAAGCTACTAATGCAGAACTATTCGCGAGTAACTTTAAAAACATGAGTTATGTGAAAGTCCCTTCAATCGTA TGGGATTATACCACACCACAGATTCTAACAATGGAGTATGTTCCCGGGATTAAAATAAACAAAATACAAGCTTTAGATCAGCTGGGTGTTGACCGCACAA GGTTAGGGCGATATGCTGTCGAGTCTTACTTGGAGCAGATTCTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGT CAATGGTGGAAGATTGATCTTTTACGATTTTGGTATGATGGGAAGTATCAGTCAAAACGTCCGAGAAGGTTTACTTGAAACTTTTTATGGAGTTTATGAG AAGGATGCAGACAAGGTCCTTCAAGCAATGATTCAAATGGGTGTTCTTGTCCCAACTGGAGATATGACTGCTGTTAGACGGACAGCACAGTTCTTTCTCA ATAGTTTTGAAGAGCGTTTGGCTGCACAAAGGAGGGAGAGAGAGTTGGCTAAAGCTGAAATTGGATTCAAAAAGCCATTAACCAAGGATGAAAAAATAAT GAAGAAGAAAGAACGTCTGGCTGCTATTGGTAATGTACCTGGTCTAATATTGTATGGGAATTTAGGTTTAGATTGTTTGGATGTATGCATTGATCAATTA TAGTTGATTAAACTGGCCAGATTTGAAGATGATAATAGATGATTTCTAGGTATATTGTCTGGGCTATTTGCTAAAAAATACCAGTATGTTATTATTTTAT CCAGTAGCTTTCATGCAGGTGAAAAGCTGTGTGCAACTCCATATGCTATGAATTTTAAGCTAGTTTTCCTTATTGGTTAAAATGTTTTCTTCCTCGAAGT TTGACATGACCAGCCTCAACTATAAATATATGATCTGCATCTGAATTTCTATTACTTAAAATTATTTGTTGTCGTGTTCGGTTAGTGCATCTTTAGTTTG ATTGAAAGGAACATAATGAGAATGAGCATCCATATAATTGTTGAGTTCCATTCAATGAACCCCTCTTCCACTGTACAAGAATGGCCTGCAAAGATTCCAG TATACTTGTTCATCTGTACTTTTTTAGGCCTGAAATTTTTTGCACTGGCCAATAATTTTGTTGTATATTTTCTTTAATCGATTATAAAATGGAATGAAGT CATCATTCAGTTCCTGTCTATAGCAAATGAATATAGGAATAAGCACTCCTTTCTAATCCATTTCCACTCCCATTCGCATTCCCATTTCATCAAAAATCTT TCCATCAAACAAAACATGACCTTAGTTCAATAACATCATGCAACTTATAGGCTTATTACTTGTAGCTCTAATCCTTTAAACAGGTGAAGATTTACTATCC ATTGCAGCAGACCAGCCCTTCCGGTTTCCTGCTACATTCACATTTGTTGTTAGATCCTTCTCAGTGTTGGATGGTATCGGAAAGGGTCTTGACCCCCGTT TTGATATTACTGAGATTGCCAAACCTTATGCTCTGGAGTTGCTAAAATTTCGTGAGGCAGGAGTTGAAGTTATCTTAAAGGACTTCAAAAAGAGACAGGA CAGACAATCTCAAGCATTTTACAACTTATTCAGACAGGCTGATAGAGTTGAAAAGATTGCTGAAATTATCCAAAGATTGGAGCAAGGTGACCTAAAGCTC CGAGTTCGAACTTTGGAATCTGAAAGGGCTTTCCAACGTGTTGCCACTGTCCAGAAGACAATAGGGAATGCAGTAGCTGCTGGGAGCCTAATAAATCTTG CAACAATTCTGTATCTCAATTCAATTAGTGGGCCTGCCACCATAGCATATTTCTTCTGTGCAATCTTTGGTTTTCAAGTTCTCATTGGTATTGTGAAGAT CAAGAAGTTAGATGAACGCGAACGGTTGATTACTGGGACTGCTTGAGAAACTACAAGGTGATTGTTGGTTATTTTATTAAAAAAATGTTATGTATTGTTC ACTTTAAGATAATATGCTAGAATGTTATTTAGGTGGTCAAAAAGATTGTTTGGGAAGTTTTTGGCATGAAGGGTTTTTTCCCCTCATCACGGTGCTTGTT CATGCCTTGTGACCCAGTTGCTCCAGATTCTAGTTGTGCAGACAGCCCTTCCATTCACTGGGATTAAGGTTGTACACATCTTACCCTTCTCATACCCCCA ATAGTGGGAACTTGGGCAATGGGTGCCCTTGTTATCGTCTAGTTCTCTTATTTCAAGGTTTAGGATACATATATCTGAGGCTCCTCATATTTGACCCATA ATAGTAGGAATCTCATGTACTGCGTCACCCTCTTATATTGTCTGGTTCTAAATTTGAAGTTTGATTTTGGTTTTTGAGACTAAGCATATTAAACTAGGAA ACTCTTAGATTTAAGCATATCTTACTTGATGGCATTCCTAAGTATTAAGAGTGTTGTGTCCCAATGCCTTCTCATGTTGTTAATCGCAACCACTTTATAA CAGAATTTGCCACTTATGTTAATAGGTCCTTATCGCATAAATGTAAATTCATTTGTCCTTGATACTTATCCTCCCTTAAAAGAGCGAACGAGCAAAAGAA CAACGAAAAAGAGGAGGCTGACAACACTCTTGAGTTTTGTCTGTCCTTTCATTCTTTATTTTCAGTTTCAGTGTTATGATAGCCTTTGGCGTAATTCTTG TAATGAAAGACAGGCTCTCTTTGTTTCCCACTCTTAAGAAAAATGAACTGTGATCCTATTGATTTAAGCGAATGACTCTGACAGGTGCAAATTCTGATGT GCCCACTTAATTTCTTGTCAAGGTACATTAATATGGCACTATTATAATTCTGAGAAAACTCCTGGATTCCTAGACACATCTATTGTCTAGTACTACGAAG TTGGCATACTAAATGTGAGCATGAGTTACTTGAAAATGTCAGTAGCATGAAATACTGATTCGCAGAGTCTGTTACATAATTGAGATACAATCAGAGTTTA AAATTCCCTGTAGTTTCCGTTCGCTCTGGGGTACTTCATATGACTTCTGTTGCTTTTGTTTGATTTAGCCCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78744; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179271
| Blastp | Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 67.84% of identity |
|---|---|
| Blastx | Protein ACTIVITY OF BC1 COMPLEX KINASE 8, chloroplastic from Arabidopsis with 68.22% of identity |
| Eggnog | Required, probably indirectly, for the hydroxylation of 2-octaprenylphenol to 2-octaprenyl-6-hydroxy-phenol, the fourth step in ubiquinone biosynthesis (By similarity)(COG0661) |
| Kegg | Link to kegg annotations (AT5G64940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462413.1) |
| Pfam | ABC1 family (PF03109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |