| Id Trinity | FTRINITY_DN58631_c0_g2_i12 |
|---|---|
| Name Transcript | Ll_transcript_179244 |
| Sequence | ACTTTCTATCGTTCCCTTTTCATTTTCAGAAAAGAAACATAGACACAAAAAAAGAAGCAATAACTTTTCAACAACAATGGAAGATAATAACTCAGCTCAC GAATTGAACGGTTCCGTCACCGCTAACGGCGGCGCTGACCATGGCTGGCAGAAAGTAACCTACGCAAAACGACAGAATAAGAAAAAGCCAAATGACACCA AAACCGTCGCGAATTCCGACAAGTTTCTTCCAAATGGAACTTTATCTGGCGGCGACGGCGTTTTCCACTCGCTGGAGCTGCATTCGGAGGAGCGGCGCCG GCGAATTGCCGAGGCGCGGAGGGCGGCTGATTCTGAATTCGACGATGAGGCTCTTGTTAGATCGAAGCAGCATCGTCGCGATGATTATGATGATGACGAT GATGAGGTGGATCATTCTGCGGAGAATGGAAAGGTGGAGGAGGAGAAGAAGGTGAAAGTTAAGAAGCCGAAGAAACCTAAGGTGACGGTTGCGGAAGCTG CGGCGAAGATTGACAGTGATGATCTGGGGGCGTTTTTAGTTGATATATCGGGATCGTATGAGACGCAGCAGGATATACAGATGATGCGGTTTGCAGATTA TTTCGGACGAGCTTTTTCTGCTGTGAGCAGTTCTCAGTTTCCATGGGTGAAGTTGTTCAGAGAATCAACTGTGGCTAAGATTGCCGATGTGCCACTTTCT CACTTATCTGATGCTGTATATAAGACATCAACCGACTGGATTAACCAACGTTCTCCTGAGGCACTTAGTTTGTTTGTGATTTGGTGTTTAGACAGCATTC TTGCTGATTTAGGTAGCCAGCTAACTGTGGCCAAGGGTTCTAAAAAGGCTGTGAAACATGTGGCTTCAAAATCTCAGGTTGCGATATTTATTGTTTTAGC AATGGTATTGCGTCGGAAGCCTGATTCTCTTATTGCTGTATTGCCTGCACTGAGGGAGAATGCTAAGTATCAAGGGCAAGATAAGCTTACAGTGATTGTA TGGGTGATTGCTCAGGCTTCACTAGGAGATCTCTCAGTAGGTTTGTATGCATGGGCACGGAATCTCCTACCTATAGTGAGTAGCAAAACTGGTAACCCGC AATCAAGGGATTTGGTTTTGCAGCTAGTGGAAAAAATTTTGTCTACTCCTAAAGCACGCCCTATTTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATT AATTCCTCCTTCTTCGTTTGAAATTTTGGTCCGGGTTACTTACCCTCAATCTTCAGCTAGAGTAAAAGCTACCGAAAGATTTGAGGCCATATATCCCACT CTGAAAGAGGTGTCTCTTGGTGGTTCCTCCGGAAGTAAGGCAATGAAACAAGTTTCACAGCAGATATTCAATTTTGCTATCAAAGCAGCAGGAGAAAACA ATCCAGTGTTGTCAAAAGAAGCAGGTGATATTTTTATTTGGTGTTTGGGCCAAAGCACTGAATGCTACAAACATTGGGGTATAGCTTACCAGGACAACAT TGAAGCGAGCGTATTAATTCTGAAGAAGCTCTCTGATGAATGGAAGGTGCAATCAACAAAATTGTCTCCGTATGAGCCACTAAGGGAGACCCTAAAGAAT TTTAGGCAAAAGAATGAGAAAGCATTGGCTACCGTAACAGATGATGCTCGCCAAGCACTCTTCAAGGACGCAGACAAATATTCTAAGCTGATCTTAGGAA GAGTTTCAGGAGGCCATGGGTGCGTGACATGCTTGACCTTCACAGTTCTTGCTGCAGCTGTGGGTGCTTTCGTTCTGTCTCCCAACATGGTAGAGTATTT GGATTTTAAGAAGCTCCCTTTAGTTTTCAACTCTCAGTTTTGAGCACTCTTCGTAGAATGTTCTGCACTACTGGCAGTTGGTTGTACCAAGCAGGGATTT TCATATGGGCCTAGCCCTTTCGAAATGGGTATACCCACTAGTCAACTGCTTCGGAGTAAAATGCAGATAATGGGGAGGGAGGTTGTACACTTAGTTCAAA TGACAAATAATAGTTGCGGTCAACAATGGTTGAGGTTTACGTTAGTTTGACCTTGTTATAATTTATTTGATGTTCTTGTTTCTGTTGAGTCTTTAAAGTT TAGTTATCCTATGGCTTTACATTAACGGTTCTGGAAAAGTGCCAAAGAGGTAACTACACTTGTATTCTGGACTCAGTTTAGTTATAAATTAAAGGAATTT TGATGATAATAGTGCAAATTTTTCTGTAGATTTTTCGATGTTATCATCATGCCTTTTGTCCTTCTTCCTTGTTTTTTTCTGTTTTTCGATTTTTTTACTC CTCTAATTGAGCAGTATTTTTTAAGCCTATCAGTACAAAACAGGAATATATGATTGCTTTGATTGAAAAAAAGAAATGAATAATTGCTTTCAGTAGTTCA TAGGCGCTTGCTTTGTAGGCTAATCTTCTGAGACACTATTTTATAATTGTTTAGTCACATTTTTTTTATTAAACATTATCCGAAATTTGGCATTGCATAA TCAACATCGTTATCACTTATTTCAAGTATTGAATTGATCAAAGTTGTTTTCTGAAGGATTTATTAACTGCATGGAAGTTGATCTTTTACAGATTATCTGA CAGTTAAATTAAAAACTTAAGTGTTCACATATAAATTGTGTGATTGAATCTCATACAGTGCATTTTAATGCTGAGAGGGTATATATAGCACCAAAGAGAA CATGCATTTTATAATAGAAACCATGAAAGGTATTACGCTACATTTTATAATATCTGATTTGTTATCTTATTGTAAAGATTTATACATAATCACTATATTA TCTATATCATTCATTTGTATTAGTTTTTATTTAAGAGTCAACAATGATGAAATATAAATGGTAGATAGTGAAATGATAGTGTATAAAAGTCTTAGCGCAT ACAATTTTTTCTTTTCATAATCATAATCTTCAGGTTTGGCAAATGGGTATTTTGATTTTGAGTATGCATTTTTATCTTTTGATGAATCTTCGGGTACAGA CCACTGGTGCTTGAAGGATGGATCCCTTGGGAACTTTCTGAAGTTTAAAAATGGTACCCATAGAATAATCCAGCAGGACAAGAAGGAAATAATTCACACA TTACTGTGCTGTTTGGAGAGACTATTTTTTTGAGTTTGCACTAGAACTAAGCAGATTGTGATTACGAGAGTAGTCACTTGACAGAGAGTTAAATTGTTTC TGAAGAAGCTCTCACCCTGGAAATAAAATGAAGAAATTCACATGGCAAAAAGAACAGCAACAAGTGAATTTTTTATGTTCAGGAATCTCACCAAGGCCAA GAGTACTCCTATATGCAGTGCCAAACTAGGCTTCTTTAACTTAAATAATCACTCGGGTTCTGGTTGTTGCAGCATGTTAGTATCTGGAACTGGATTCATT GTTTCAAGTCAAAAAGGTTTTTCAATGAGAGTAGCAAATTAAAATTGTTGGAATAAGAAAAGGCACAGTACATGATGTAGTGATTGAGAAGGACTAGAGT TGTTATGAAATGGTTTGTGCTTGGAGGCTGAATGAAAATCTCATTTTTTGTATTGTTTAGAGCTCTCTGAGTTTGGTTTCTTATCCTTTTTTCTTCAGTT CAGTTCCATGGTAAGGGGTGCATGGCTTTGTGTGGAAAAGGATGACAAAACTAATTGTAGATTGAAGGGAAGTGAGAATCATTTTTTTTCTACTACTAAT ATTATCTCCTCACTTTTTTGGGCAAGGAACTAATCCATTTTGGGGTTTGTGGCTGCCTCTCCCAATAAATGTTGCTCTCAGGAACCTTGAAAATTCAATT GGAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78753; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179244
| Blastp | Transmembrane protein 214-A from Xenopus with 24.49% of identity |
|---|---|
| Blastx | NAD(P)H-quinone oxidoreductase subunit L, chloroplastic from Arabidopsis with 57.69% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (779351) |
| CantataDB | Link to cantataDB annotations (CNT0000596) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445834.1) |
| Pfam | TMEM214, C-terminal, caspase 4 activator (PF10151.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |