Ll_transcript_179229

• Id Trinity: FTRINITY_DN58631_c0_g2_i3
• Name Transcript: Ll_transcript_179229
• Sequence: CAACTCCCACTGCATTGTGGCAATTAATTAATTGGATATTGGATAGAAGAATATCAATTTCAAATCTTTAAATAATTTTCTCTATTCAATTCATCTTCTC TACCTTTCTCTTATTCTCTAAAAGCAGAAAAAATCAATCAATCAATTCTCAACAACAATGGAGGATAACCATGGCTGGCAGAAGGTAACATACTTGAAAC GACAGAACAAGAAGATTTCAAACGACACCAAAACCACCGCCAATTCCGATAAGCTTCTTCCTAACGGCACGTTATCCGGCGGCGACGGAGTTTTCAGGTC GCTGGAGCTGCATTCGGAGGACCGTCGCCGGCGAATCGCTGAGGCTCGGAGGGCGGCTGATGCTGAATTTGATGATGACGCTCCGGCCAGATCGAAGCAG CGACGTCGCGATGACTATGATGATGATGATTACGATGATGAGGTGGATCGTTCCGCGGAGAATGGGAAAGAGGAGGAGGTGAAGAAGGTGAAAGCTAAGA AGCCGAAGAAACCTAAGGTGACGGTTGCGGAGGCCGCGGCGAAGATCGATGCTGCTGATCTGGGGGCTTATTTGGTTGATATATCGGAATCTTATAAGAC GCAGCAGGATATACAGTTGATGCGTTTTGCTGATTATTTTGGACGTGCTTTTTCTGCTGTTAGCGGTTCTCAGTTTCCCTGGGTCAAGTTGTTCAGGGAA TCACCGGTGGCCAAGATTGTTGATGTGCCACTTTCTCACATATCTGATGCTGTGTATAAGACATCAGCCGACTGGATTAACCAACGTTCTCCTGAGGCAC TTAGTTCGTTTGTGCTTTGGTCTTTAGACAGCATTCTTACTGATTTGGGTAGCCAGCTAACTGTAGCCAAGGGTTCCAAAAAGGCTGCAAAACAAGGGTC ATCAAAATCTCAGGTTGCAATATTTATTGTTTTAGCAATGGTATTGCGTCGGAAGCCTGATTCTCTTATTGCTGTGTTGCCCACATTGAGGGAGAATACT AAGTATCAAGGGCAAGATAAGCTTACAGTGATTGTATGGATTGTAGCTCAGGCTTCACTAGGAGATCTCTCAGTAGGTCTGTATGCTTGGGCGCGGAATC TCCTACCTATAGTGAGTAGCAAAAGTGGTAACCCGCAATCAAGGGATTTGATTTTGCAGCTAGTGGAAAAAATTTTGTCAACCCCTAAAGCACGGCCTAT TTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATTAATTCCTCCTTCTGCATTTGAAATTTTGGTCCGAGTTACCTTCCCTACATCTTCAGCTAGAGTA AAGGCTACTGAAAGATTTGAGACAATATATCCCACTCTCAAAGACGTGGCTCTTGGCGGTTCCCCTGGAAGTAAGGCAATGAAACAGGTTTCACAGCAGA TATTCAGTTTTGCTATCCAAGCAGCAGGAGAAAACTATCCGCAGTTATCAAAAGAAGCAGCTAATATTTTTATCTGGTCTTTGGGCCAAAGCACTGAATG CTACAGGCAATGGGAAAAAGTTTATGAGGACAACATTGAAGCAAGTGTTGCAGTTTTGAAGAAGCTCTCCGATGATTGGAAGGTGCAATCAGTAAAGCTG TCTCCTTATGAGCCACTGAGGGAGACCCTAAAGAATTTTAGGCAAAAGAATGAGAATGCATTGGCTACTGGGTCAGATGCTACTCGCCAAACACTCTTCA AGGAGGCAGATAAATACTCTAAGCTGATCTTAGGAAGAGTTTCACGAGGCCATGGGTGTTTGACATGTTTGACCTTCACAGTTCTTGCCGCGGCTGTTGG TGCTGTCGCTCTGTCTCCCAACCTGGTGGAGTATTTAGATTTTAAGAAGCTCTCTGTAGCTTTCAACTCTCAGTTTTGAGCACTCTATGGAGAATGTTCT GCATTTCTGGCAGTTGGTTGCACCAAGCAGCAATTTGAAATAGGCTTAGCCCATTCAAAATGTGTATACAGTATAGACCAATTGCTTCATAATAAGGTGC AGATAACGGTGAAGGATGTTGTACAATTAGTTCAAATCCTGTTCAGATGACACAGAATAGTTGAGGTCGACAATGGTCGAGATTTACTTTAGTTTGGCCA TTTTATAATTTTTTATTTTTTATGTTTCAGTTGAGTTGTTTAAAGTTTAGTTATCTTATTTATGTCTTTACATTAACCGTTCTGGCAAAGTGCCAATCAG GAAAGTGCACTAGTATTCTGGACTTAATTTAGTTTAATTAAAGGAATTTTGATGACAATACTGCAAATTTTTCTCCAGTTACTTTTTACTGTTATCATTT ATTTTCCTGTGTTTTCCATGTTTTCATTTCTTTCTGGAAAATTTGTTTAGCATATCATATGGT
• Tissue: flowers
• Gene name: LI_gene_78753;
• Additional information: details;

Expression of Ll_transcript_179229

FPKM

• FPAB: 3.4
• FPNAB: 3.6
• LF1: 4.1
• LF2: 1.7
• LF3: 2.2
• LF4: 2.3
• UF1: 4.2
• UF2: 2.3
• UF3: 2.9
• UF4: 1.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179229

• Blastp: Transmembrane protein 214-A from Xenopus with 26.48% of identity
• Blastx: Transmembrane protein 214-A from Xenopus with 26.48% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (779351)
• CantataDB: Link to cantataDB annotations (CNT0000596)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464127.1)
• Pfam: TMEM214, C-terminal, caspase 4 activator (PF10151.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;