Ll_transcript_179230

• Id Trinity: FTRINITY_DN58631_c0_g2_i4
• Name Transcript: Ll_transcript_179230
• Sequence: ACTTTCTATCGTTCCCTTTTCATTTTCAGAAAAGAAACATAGACACAAAAAAAGAAGCAATAACTTTTCAACAACAATGGAAGATAATAACTCAGCTCAC GAATTGAACGGTTCCGTCACCGCTAACGGCGGCGCTGACCATGGCTGGCAGAAAGTAACCTACGCAAAACGACAGAATAAGAAAAAGCCAAATGACACCA AAACCGTCGCGAATTCCGACAAGTTTCTTCCAAATGGAACTTTATCTGGCGGCGACGGCGTTTTCCACTCGCTGGAGCTGCATTCGGAGGAGCGGCGCCG GCGAATTGCCGAGGCGCGGAGGGCGGCTGATTCTGAATTCGACGATGAGGCTCTTGTTAGATCGAAGCAGCATCGTCGCGATGATTATGATGATGACGAT GATGAGGTGGATCATTCTGCGGAGAATGGAAAGGTGGAGGAGGAGAAGAAGGTGAAAGTTAAGAAGCCGAAGAAACCTAAGGTGACGGTTGCGGAAGCTG CGGCGAAGATTGACAGTGATGATCTGGGGGCGTTTTTAGTTGATATATCGGGATCGTATGAGACGCAGCAGGATATACAGATGATGCGGTTTGCAGATTA TTTCGGACGAGCTTTTTCTGCTGTGAGCAGTTCTCAGTTTCCATGGGTGAAGTTGTTCAGAGAATCAACTGTGGCTAAGATTGCCGATGTGCCACTTTCT CACTTATCTGATGCTGTATATAAGACATCAACCGACTGGATTAACCAACGTTCTCCTGAGGCACTTAGTTTGTTTGTGATTTGGTGTTTAGACAGCATTC TTGCTGATTTAGGTAGCCAGCTAACTGTGGCCAAGGGTTCTAAAAAGGCTGTGAAACATGTGGCTTCAAAATCTCAGGTTGCGATATTTATTGTTTTAGC AATGGTATTGCGTCGGAAGCCTGATTCTCTTATTGCTGTATTGCCTGCACTGAGGGAGAATGCTAAGTATCAAGGGCAAGATAAGCTTACAGTGATTGTA TGGGTGATTGCTCAGGCTTCACTAGGAGATCTCTCAGTAGGTTTGTATGCATGGGCACGGAATCTCCTACCTATAGTGAGTAGCAAAACTGGTAACCCGC AATCAAGGGATTTGGTTTTGCAGCTAGTGGAAAAAATTTTGTCTACTCCTAAAGCACGCCCTATTTTAGTGAATGGTGCTGTAAGAAAAGGGGAACGATT AATTCCTCCTTCTTCGTTTGAAATTTTGGTCCGGGTTACTTACCCTCAATCTTCAGCTAGAGTAAAAGCTACCGAAAGATTTGAGGCCATATATCCCACT CTGAAAGAGGTGTCTCTTGGTGGTTCCTCCGGAAGTAAGGCAATGAAACAAGTTTCACAGCAGATATTCAATTTTGCTATCAAAGCAGCAGGAGAAAACA ATCCAGTGTTGTCAAAAGAAGCAGGTGATATTTTTATTTGGTGTTTGGGCCAAAGCACTGAATGCTACAAACATTGGGGTATAGCTTACCAGGACAACAT TGAAGCGAGCGTATTAATTCTGAAGAAGCTCTCTGATGAATGGAAGGTGCAATCAACAAAATTGTCTCCGTATGAGCCACTAAGGGAGACCCTAAAGAAT TTTAGGCAAAAGAATGAGAAAGCATTGGCTACCGTAACAGATGATGCTCGCCAAGCACTCTTCAAGGACGCAGACAAATATTCTAAGCTGATCTTAGGAA GAGTTTCAGGAGGCCATGGGTGCGTGACATGCTTGACCTTCACAGTTCTTGCTGCAGCTGTGGGTGCTTTCGTTCTGTCTCCCAACATGGTAGAGTATTT GGATTTTAAGAAGCTCCCTTTAGTTTTCAACTCTCAGTTTTGAGCACTCTTCGTAGAATGTTCTGCACTACTGGCAGTTGGTTGTACCAAGCAGGGATTT TCATATGGGCCTAGCCCTTTCGAAATGGGTATACCCACTAGTCAACTGCTTCGGAGTAAAATGCAGATAATGGGGAGGGAGGTTGTACACTTAGTTCAAA TGACAAATAATAGTTGCGGTCAACAATGGTTGAGGTTTACGTTAGTTTGACCTTGTTATAATTTATTTGATGTTCTTGTTTCTGTTGAGTCTTTAAAGTT TAGTTATCCTATGGCTTTACATTAACGGTTCTGGAAAAGTGCCAAAGAGGTAACTACACTTGTATTCTGGACTCAGTTTAGTTATAAATTAAAGGAATTT TGATGATAATAGTGCAAATTTTTCTGTAGATTTTTCGATGTTATCATCATGCCTTTTGTCCTTCTTCCTTGTTTTTTTCTGTTTTTCGATTTTTTTACTC CTCTAATTGAGCAGTATTTTTTAAGCCTATCAGTACAAAACAGGAATATATGATTGCTTTGATTGAAAAAAAGAAATGAATAATTGCTTTCAGTAGTTCA TAGGCGCTTGCTTTGTAGGCTAATCTTCTGAGACACTATTTTATAATTGTTTAGTCACATTTTTTTTATTAAACATTATCCGAAATTTGGCATTGCATAA TCAACATCGTTATCACTTATTTCAAGTATTGAATTGATCAAAGTTGTTTTCTGAAGGATTTATTAACTGCATGGAAGTTGATCTTTTACAGATTATCTGA CAGTTAAATTAAAAACTTAAGTGTTCACATATAAATTGTGTGATTGAATCTCATACAGTGCATTTTAATGCTGAGAGGGTATATATAGCACCAAAGAGAA CATGCATTTTATAATAGAAACCATGAAAGGTATTACGCTACATTTTATAATATCTGATTTGTTATCTTATTGTAAAGATTTATACATAATCACTATATTA TCTATATCATTCATTTGTATTAGTTTTTATTTAAGAGTCAACAATGATGAAATATAAATGGTAGATAGTGAAATGATAGTGTATAAAAGTCTTAGCGCAT ACAATTTTTTCTTTTCATAATCATAATCTTCAGGTTTGGCAAATGGGTATTTTGATTTTGAGTATGCATTTTTATCTTTTGATGAATCTTCGGGTACAGA CCACTGGTGCTTGAAGGATGGATCCCTTGGGAACTTTCTGAAGTTTAAAAATGGTACCCATAGAATAATCCAGCAGGACAAGAAGGAAATAATTCACACA TTACTGTGCTGTTTGGAGAGACTATTTTTTTGAGTTTGCACTAGAACTAAGCAGATTGTGATTACGAGAGTAGTCACTTGACAGAGAGTTAAATTGTTTC TGAAGAAGCTCTCACCCTGGAAATAAAATGAAGGTAAACATGAATTCCAAATATGGAAATAAAATGAAGGTAAACCTGAATTGCAAATACATCAAAAAAT TTCTTCTGTGCCATATTATCC
• Tissue: flowers
• Gene name: LI_gene_78753;
• Additional information: details;

Expression of Ll_transcript_179230

FPKM

• FPAB: 5.4
• FPNAB: 5.3
• LF1: 6.3
• LF2: 3.7
• LF3: 3.2
• LF4: 3.5
• UF1: 8.5
• UF2: 4.4
• UF3: 2.8
• UF4: 3.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179230

• Blastp: Transmembrane protein 214-A from Xenopus with 24.49% of identity
• Blastx: NAD(P)H-quinone oxidoreductase subunit L, chloroplastic from Arabidopsis with 57.69% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (779351)
• CantataDB: Link to cantataDB annotations (CNT0000596)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445834.1)
• Pfam: TMEM214, C-terminal, caspase 4 activator (PF10151.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;