| Id Trinity | FTRINITY_DN58638_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_177096 |
| Sequence | CCCGCCCACCACACTTGTATACTTGATTTTGAGAATTTCTGGACCTTGAAGGCTCGGAATTTACCGATACTTGTATTTATTCTTTTACAGCAAATATAAA TATGAAATTCAGAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCCGGTAAGCATTGTATTTTTTTCCAAATTGTTTTCCTCTAAATCATGTGCAGAACTC AGACCAGACAATAAATTACTGACCAAGTGATGTCTTAAATGTAGCTAGTCGGATGGATTTGAAGGAGCTCAAGATGGGGTAACGTCCTAGCCTAGGAGCC TAACTCTTCCTTCCTTATTTTTATTATTTCAATGACAATAACATGTGAAAAGAAAGTTCTGGATTCTTGTTTCTTCAGAATTCCTAATTTGGTTTCCTTA TTTTTGGTTAGATCTGAGATTTATTTAAAATACTAGAACCGACATTTCTGGGCTCATTGGCATCCTAATCTTATTTGAGTGCTGAATTGGTATTACTGAC CAAATATTGCTTTGATTATTAATATTTTCGTACATGAATGGTCAGAATTGTGAACAAGTAGGTTATTGTTACACAATTGATTCAGGTTAATTATAGTTTC CCCTGAAAGGCATTAGCTGTATCTGCACCGGTTATTTTTCCCATTACTTTCAAGAAACTAGAAGAGATTAGAAAGAAATTAGCTGTATATGTTAAAAGCT CATTTTGTGGTTGAAAGCCCCGTTCTTGGTTGTGGACTTGGGAATTACGATCAATTTGGACAGCATGTGCATCAAGGGTAGTTTAGGTCTGCTGCTCATA CACGACAAACATAGATAGACCTAAAAGTACTGTATCTCTTTGAAGCATAGAACTTATGCTATGATTCACTTTTTCTTCTTAAGTAACATAAACTCAATTT GAGTAGCAGGAGTGATTGCGATTTTTGAGCTGGGGTTAGTTTTTGAGTTTTAGTTATGATAGTTTATTTTTACTAGAGTATGTGTCTGTGACTTATTTTT AGTGACTTCTTTGAACTTTCATGAACAGATACAACATAGATCAACATGATTATTCAGTGCGTTTGAGAGCTGCTCAGAAGTTTTTGAAAGATGGTGACAA GGTTAAGATCATAGTGAACCTCAAAGGCCGTGAAAATGAATTCAGGAATATTGCTACTGAACTTCTTAGACGTTTCCAGAATGATGTTGGGGAGGTATGT ATTGCCACTTCGCTATATTATGATTATTTAACATCAGATTTCTTAAGCATTTAAAACTTTGCAATTTGTCCCTGAGAGATAGGTCAGTTGATTAAGTTGC AGGATATGGATTGTGTGTGCATGGGTTGAAAACCCTGCAGGTGTATTCCACCCATTTCCCATTCATTTCCCTGCTCCCCTGTAAGGTCTCCTTCCAGCAT GACCCCAGAAAAAAAACTGCAAGAACGAGAGAGAAATTGGTCAATGAGAAAACCAGGTCACGGAGTGTTATAATAGTGATTTTGTGTTATACTCATGCTT GGTACACCTTAAAACTCTTCAATCACCTCTTCATTTAATTTTTCTATTCAGAATATCAAACTTCGTTTGTGCATTGAATTCATTTACTATCACCCCGAGC TGATTTCTGATTTTACTATCATTGGAGACATTTCATTCTATTGCCTATTTAAATTTTATATTCAACCACACTTGGGTAATGTGCAGCTTGGAACAGAGGA AGCTAAAAACTTCCGCGACAGGAACATCTTCATAATCATGGTTCCAAATAAAGCTACTCAACAGAAAGCTCAAGAACCACCAAAGAAAAAAGACAAGTCA GAAGCAGATGAAGTTTCCGTCAGTGTCCAAACTTAGCATTACTTAAACTTTGCCTCGTGTTTCTAATAGTGGAATGATGGATTGTGGTTAACTTATGTTC ATGGTCAATGTTAGAATTTCCCTGTGTTGTATAGCATATAAGCATTCTTCCCAAAAACTAAAGATGAAGGAACAAAAACCCAACTTTTCATAGAAGGTTA GGACTTGATGCTGATTAAATTTTCGAAGTTGACGCAGCTATTCGAATCCAATGCATGTCAAATTGGTGACTATTACCAGTTTCAGTACCTTAGTCAAGAA GTATATTGCCCAAATAAAGGCATTGATAGGAAAACTATAAATTATGGGGCATATATGGCCTGATATGTTAGGGGAACATGCATTCCCTGTTTTGGATGCT TCTGATATATTTCTTCTTGGACTCAAAGTTGTACTGACTTCATCAAACGATGTTGAGAGGCTGCAAGTTGCATACCTAACTATGTGAAAGTAGCTTAGTT TTGAAGAATGCTATCATCTTACATGTTTTCTGAAATCAACAAGTTATATTTTTTTTTTTGCTATTTTTTAATATCCTGCTTTTATTACGGGAGAGGAATC TGATTCAATTTTTGATGATAAGAATACATCACGTTCGTTATATGGTGGTTGAACGTGTGAAGTTGCTGAGTAACGTTCATTATACATGACGTTAATACTT GTATGTAAAGTAAATTATGACATAAACTTAGAAATATATGTATTATCAGGTATTTTATAATGGTAATTTTTTCATTAACAACAAATTTATAGTTTGGTAA CAAGATGGTGAAAAGAAAAGGTTGTAAGGTGGAAGAAAGGCACAAAAATTGGCCCAATCCAAAATGAACATTAATGGGTTAGGTCCTCTTCGTACAAAGT CGTTGGACGGTTGGTTACTTTAACTCATTCTTCATCAATTTGAATCTGTGTCTTTCTCTCAGTTCAAAACTGCATTGTTACAAAATCATTCACTGTATTC TATTCTATTCATCGGTGGCGATGGGGAACACATCGTCGATGCTGACTCAGTACGACATTGAAGAGGTTCAACAGAATTGCAAACACGCATTTACTCAACA AGAGATAGTATCTCTGTACCAACGATTCTGTCAACTAGATCGTAACAAGTGCGGTTTCATTTCTTCCGATGAGTTCATGTCCATTCCCGAATTCGCATCA TTTTCAAGGTATATGATTCCGACTGCAACGGGAAAGTCACGTTCGATGATATGTCGAGGGTTTTGCGCGATTTGTCTGGACAGTTCATGTCACAACAACA AAGAGAGGAAGTTTTGGCACAGGTCCTTGAGGATGCAGGCTATAACAAGGACTCTTTTTTAGTCTTGTCTGACTTCATGAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78803; |
| Additional information | - |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_177096
| Blastp | - |
|---|---|
| Blastx | Translation initiation factor IF3-2, chloroplastic from Arabidopsis with 78.69% of identity |
| Eggnog | IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins (By similarity)(COG0290) |
| Kegg | Link to kegg annotations (AT2G24060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453680.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |