| Id Trinity | FTRINITY_DN58643_c9_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_176873 |
| Sequence | ACCGGATTCTTTGCCCTTCTTGGAGCTGCGTCCTTCCTTGGTGGCACCATGAGAATGACAGTGTCCCTTGGTGTTATACTACTTGAGCTCACTAATGATC TCTTGTTACTTCCACTAGTGATGTTGACCTTATTAGTCTCAAAAACTGTGGCTGATAGCTTCAACAAGGGTGTTTATGACCAAATACTACATATCAAAGG ACTTCCTTATTTGGAGGCTCATGCAGAACCTTACATGAGGAATTTAGTTGCACTCGATGTTGTCACGGGTCCATTAATCACCTTTTCTGGCATCGAAAAG GTTGGAAATATAATACATGTTTTGGAGAGTACAGGGCATAATGGGTTTCCTGTCATTGATGAACCACCTTTCTCAGACACACCAGAGTTATGTGGGATTG TACTGAGGTCTCATTTGCTAGTATTACTGAAGGGGAAGAACTTCTCTAGAGAAAGGGTGCCTGCGGGTCAAAGCATCTTCAAAAAGATTTCCGCATTCGA TTTTGCAAAGGCGGGATTAGGGAAAGGAATCAAACTAGATGATCTAGATATCGAAGAGGAAGAGATGGATATGTATGTTGATCTCCATCCTATAACTAAT GCTTCCCCATACACAGTGGTTGAGACAATGTCACTTGCCAAAGCTGCTATTCTTTTCCGCCAACTTGGACTAAGGCACATGTGTGTTGTCCCAAAGAGCC AAGGGAGACCTCCAGTTGTTGGGATTCTAACGCGCCATGATTTTATGCCAGAGCATGTTTTGGGACTTTACCCTCATATGAAGTCTCACAAATGGGACTG ATTGGTCCTAGTGAAAGTAACTGTTCAAGGAACCCTTTTGAGAGTGCTTGGTTTATGAATTTTTATTGGTTATTATCTAGCATCTATATAAAAATATTGT TATCAACCTCTATTTTGTGAAGTCAATCTTGATAAATTCATATAGACATTTATGAAACACAACCCAATCAACACTAATCAATAGTATTAAGATGGACAGA GCATGATATTTTAGTTTACTGGCCCAACTTGCCCGCCTGCGCTCGATTTGCTCGCGGGCTTGCCTAATGATGTATAAGGTGAGATGCCCGTCGGCATAAA AAATCTGGTCAACTTATAGAGACCATATATCTAATAAAAGATAAGAGTATGCACCCATATATCACACACTAATATATTAAAACCACCAAAGTAACAATAT TTTAAAACTAAACATACAAAATAACCTTCAAACTCAATAGCGAAAATTCACTCTAATTGTAAAACTTTATCATTTGTATATGTTTCTAAGTATAAGAATG TTATGAAATGGTAACGATTTTCTAATAGGTATGCTCTACAATTGAATAACATAAGAAATGTTCTTAAAAGATTAAAAAATCCATGGATGTTCTTATTAAC AAGTAGTACTTATTAAACATGTCAATTATGCATCTATAGTATTGCTACCCAAACATATAACTTCACACTAGGCCACTTATACCCTCCAATCTTTCCATTA TTATTTTAATAAATATGAAGCGAGTGTAATATTATGTTTTAAGTATAAAGATATATATATATATATATATAGTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78835; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_176873
| Blastp | Chloride channel protein CLC-c from Arabidopsis with 76.06% of identity |
|---|---|
| Blastx | Chloride channel protein CLC-c from Arabidopsis with 75.29% of identity |
| Eggnog | chloride channel(COG0038) |
| Kegg | Link to kegg annotations (AT5G49890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430637.1) |
| Pfam | Voltage gated chloride channel (PF00654.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |