Ll_transcript_179247

• Id Trinity: FTRINITY_DN58652_c2_g1_i1
• Name Transcript: Ll_transcript_179247
• Sequence: TAGTGCAAGGTTACCAAGTTCCATGGAGAATGACCTCTTTCAAGAGCAGAAATTGCCACAAGGTCTCATAAAAGCAATCAAGTTTGATGTCTTAATTGAG GCAGATATAGAAAAAATGGTTGCTTTGGAGATAAATGCAGCCGGGCAGGTCAACTGTTCTGACCTGGGACTCCCAAATTTATCTTCTGAGTGCACTACAT GTGGTGCTAAATCTTTCGATAAAAATTCTTGTGAAGGTCATTGTGGAATGATCAAATTTCCTTTTGGCATACTACATCCATATTTTATGTCAGAGATTGC ACAAATCTTGAACAAAATTTGCCCCGGATGTAAATCTATTCGACGAGAAATACAGAACAAGGCTGCTCAAATTCTGTCTGGAGTCAAGCAGCTTAACGGT TGCAAATATTGTTCTGGAAGTTTTATGGTTCGCTATCCAACAATGAAATTCAGAGTTTCCTCAAATGACCTCTACAGAAGAACTGCAATTATTGCTGAGG TTAATGATAAGGCTCCAAAGAAGAAATCTTTTGGTCTAGGATTACCTGATGATTATTGGGATATTATTCCTGCAGATGCTCAACAAGAAGAAGGTTTTAC AAAATCAAATAGAATGGTTTTATCACCTGCCCAGGTTTATTCGTTGTTGGCTGATGTTGATCCAAACTTTATTAAAAAATTTGTGCCACGGTTGGATTTA CTTGGCCTCAACTACTTCCCAGTGACACCAAATTGTCATCGTGTGACAGAATTCGCACATGCATTTTGTAATGGGAACCGGTTGAGTTTTGATGACAGGA CTAGAAATTGTAAGAAATTGGTTGATTTCAGGGGTACAGCTAATGAGTTAAGTTCTCGTGTTTTGGATTGCTTGAGGATCTCTAAGTTAAATCCTGATAA AACACCAAGTAGTAATATCTTTGCTGATATTCAGCAAAGAAGAGTTGGTGAAAATGGTTGCAATTCATCTGGTTTGAGATGGATGAAAGATGTGGTTCTT GGAAAACGCAATAGTAGTTCATTCCGTACCGTGGTTGTCGGTGATCCAGACCTTGAGCTTAGCGAGATTGGACTACCTTGTCAGATTGCAGAAAGTTTGG AGGTTTGTGAACATGTAAACAGGCAGAATAAGGAAAAATTGCTTGATTGTTGTGAGTTACGCATGTTAGAGAAGGGGCATATAAGCGTCCGCAGAAAGGG TAGTCTAACTAAATTGTACAAAAAGGAAGATCTTAAGATAGGAGACATTATATATAGGCCCCTTACTGATGGGGATAAACTGCTGATAAATAGGCCTCCT TCCATACATCAACATTCCATGATTGCCCTCTCGGTTAGGGTCCTTCCTATATCTAATGTGGTATCTATTAACCCAATTTGCTGTTCCCCACTGCGTGGGG ATTTTGATGGTGATTGTCTTCATGGGTATATTCCACAATCAGTTAGTGCTAGAGTTGAGCTTACTGAGCTAGTTGATTTAGATAGGCAATTGATTAATGG GCAAAGTGGTAGAAATCTGCTTTCACTGTCTCAGGATAGTTTAACTGCTGCTTATTTGCTGATGGAAGATGGGGCTCTTTTGAATGTTTACGAAATGCAG CAACTTCAAATGTTTTGCCCTTACAAGTTAACACTTCCTGCCATTGTAAAAGCTTCTTCGAATAATTCCTCATTTTGGACTGGCAAGCAATTGTTTAGCA TGCTCTTGCCTTCAAAATTTGACTACTCTTTTCCTCCGGATGATGTTTTTGTTAAAGATGGGGAGCTTATATCTTCCTCCGAAGCTTCTGGCTGGCTACG TGATTCGGACTGCAATGTTTTCCAGAGTCTTTTGCACCATTTTAAAGGGAAAACTCTGGACTTTTTATATGCTGCACAGAAAGCTCTTTGTGAGTGGTTG TCTATGACAGGTTTTAGTGTTTCCCTGTCAGATTTGTACCTCTCTTCTGATTCCTATTCGCGGAAAAATATGATGGAGGAAATCTCATATGGTTTACAAG CAGCAGAGGAGGCATGCAACTTCAAACAGTTACTAGTGGATGATTATTGTGATTTTCTGTCAGGAAATGTTCAAGATATTACTGTTAAAGTGGATCGTCT TAATCATGAAAGGCAAATATCTGCTTCGCTGAGTCAAGTGTCTGTTGATGCTTTTAGACAGGTTTTTCGAAGTATTCAAAGTTTAGCTGACAAATATGCA TGCAAGAGCAATACTTTCCTTGCTATGTTTAAGGCTGGAAGCAAGGGTAATTTACAGAAGCTAGTGCAACATTCCATGTGTCTTGGCTTGCAGCATTCTC TGGTTCGTTTGTCATACAGAATTCCCCGCCAACTTTCTTGTGCTGCTTGGAATAGGCAGAAGAGGCTTGATTCAATCAAGAAGTTTTTAGGAACTCCTCA ATCTGTCCAGTCTTACATTCCGTATGCTGTGGTTGAAAACTCTTTTATGACTGGGCTAAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGAT AGCTCTTTCAGTGACAATGCAGATCTTCCTGGAATGCTCACACGTAGACTTATGTTTTTCATGCGTGATTTGTATGATGCATATGATGGAACAGTGAGAA ATTTATACGGTAGTCAAGTTATTCAATTTGCTTATGATGCTGATAAGGACTCATCTCCCGATAGCTGTTATCAAGAGTATACCACGGGTGGGGAACCAGT TGGAGCACTTTCTGCTTGTGCGATTTCTGAGGCTGCATATAGTGCTTTGGGTCAGCCAATCAGTCTACTTGAAGCATCACCTCTGCTAAATTTAAAAAGG GTTCTAGAATGTGGTTCAAAGAAAAAAGGTGGTGATCAGACTGTTTCAGTATTCTTGTCCAAGAAACTTGGTAAACAGAGAAATGGGTTTGAGTATGCAG CCTTGGAAATTAAGAATTATTTGGAAAGGATGATGTTCTCAGACATTGTTTCTACCGTAATGATAATATTCAGCCAGCATTCTTGCAGCCAAGAAAAGTA TAGTCCTTGGGTTTGCCATTTCCATCTAGACAAGGAAATTGTAAAGAAAAGAAAATTTACAATGCATTCTATCATTGATTCTCTTTACCAGAGATGTGAC ACACTAAGAAAAGAGTCAAAAGTCAATTTTCCTAATTTGGTAATATCAAGCAAGAAGTGTTCTGCAAATAATGGAAAGGAGGGAGAGGATTGTGTTACTG TTACGATTGTTGAAAACTCTGAGGATTCAATACAAGTCGATGCTGTTCGGGACTTGATGTTACCCTTGCTTCTTGGAACAGCTATAAAAGGATTTCTGGA GATCAAGAAGGTTGATATTCTCTGGAGTAATCCGTCGAAAGTATCAAATTCTAGTAACCGTTCTTTTGGTGGCGAATTGTACTTGAAAGTTACTATGTCT AGTGATGGCAGCCGTGGTAGATTCTGGGGTGTACTCATAAACCATTGTCACAAGATAATGCATATGATTGACTGGACACGAAGTCATCCTGATAACATTC ATCATTTCTGCTCAGCCTATGGAATAAATGCAGGCTGGCAATATTTTCTCCATAGTTTAGCATCTGCTACATCTGATACCGGCAAGGCAATCCTTCCGAA GCATTTGCGACTTGTTGCCAATAGTCTGTCAGCTAGTGGAGAATTTGTAGGACTAAATGCTAAAGGCATGACACGGCAAAGACAACATGCATCTGTTGCG TCACCCTTTGTGCAAGCATGCTTTTCTAATCCAGGTAGTTCTTTTATAAAAGCTGCTAAGTGTGGAGTCAAGGACAACCTCCGGGGCAGCATAGATGCAT TGGCTTGGGGAAACTGTCCGTCCATAGGGACAAGTGGACAATTTGATATCTTATATGCAGATAAGGGACAAGAGCTTGCTAAATCTGTGGATGTGTATAA CCTTCTTGAGGCCAGTTTTGACCAGCTGAATGAAAAGATTGATACACCTGATGCTCGCAGCTATTCATCTGACAAATATGGTTCTGGGTATAGATATAAA AATGATGGTTATACCATAAAACAGTTTAAGCAGGCAAAAAGCAGTATAAGAAATTTTGTGACTGTGAAGGATATTCAGAAGCTGACTTATGCATCAAGTT CCATACTGAACAATTATTTGATTGATCAGCAACTAAGTGACAGGGACCTGTCAACGATGCTTCGGGTTTTGCATTTTCATCCACATAAAGATAAGAAGTT TGGCACTGGACCACAGTGCATAAAGGTCGGACAGCATCCTATATATACGGATACCCGCTGCTTTTTCATAGAACGAACTGATGGGACTGTTGAAGATTTT TCGTACCGCAAGTGCATTCTGGGTGCTCTTGAGATTATTGACCCTGAAAAAGCTAAGAGCCAGAAGAAAAGATGGTCAGGAGATAATGTTGAAAATGAAA AGAGCCAGAAGAAAATATGGTCTGAAGATAATGTTGAAAAGGCAAAGAGCCAGAAGAAAAGATGGTGGGAAAATAATGTGTAAGCTGTCTCTATTCATGT CCAAACATAATAAGTGACTGGCATTTAATCTGGTGACAGCCACAGACTTGTAAAATATGAGGGGATGTTTTGTCTGAAGAAATCCTTCTAATGCGCAGTT AGAAGGGTAATAATGGTGCCATAACTCTTACAAATCACAAAAAAACAACATTGTTTTTCCACTTTTGATTTTAAAGAGTCAACTGTAGGGGAAGCATAGT TGTTTTTTGTGGGTTTAGAGTTATGTCATTGGCATTACTCCAGCTGAAAGGTGAATAATCTGGAGCCTTCTTTGTTGTATACTATCTCAAAGCTAGATTG GGTAGTAACTTTAATCAAATGTAGCTTGATGAATTTGTTCGTCCGGTAGAGGCAGTGCTGCGAATCAAGATGAAATTGATAATTATTGTGGCAGCACGGT TTGAAACTAAGAAGATAACGGCCAGAAGGGAGCATACAAGTTGAAAGGCAAGTGGTAGCACATTTATGTAATATGTAACACTAACTTGTTCCTTGTTATG ATGAAGAAAGAATGGGGTCTTTACCTATAGCTTCCTTTTGCTACTTCCACTATTAGTTTACTTGCCTCCGATGACGCCCGGCAGAGAAATATGTAGTGGA AGCAGCAACGAGAAGCTTTTAAAGGATTACCATAGACCAGATGTATTATTGGGTGTGTGGCATTTATATGTATATTTGTTTAGACTATGTTCAAATCCTA TGGTGTCTCCTCTGTTCTCCCCTCATGCACACAAATTGAATGCTAATACCATTTCTTGGTGTATATTTCACCCTTAACGTCCGTGGAAGAGATTTGTTTA TTTTTGTGTGTAGTCAACTCCATTTGATGGGATTCAAGTTTTTTGTACCAAATGTTCCATAATTGAATGTAAAGATTAATCTCTTGGGTCTACTGAAGTT TTTTTATGGCACAAGGCAGTG
• Tissue: flowers
• Gene name: LI_gene_78904;
• Additional information: details;

Expression of Ll_transcript_179247

FPKM

• FPAB: 2.5
• FPNAB: 5
• LF1: 3
• LF2: 3
• LF3: 3.8
• LF4: 2.6
• UF1: 2
• UF2: 3.2
• UF3: 3.3
• UF4: 2.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179247

• Blastp: DNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 50.07% of identity
• Blastx: DNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 50.07% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT1G63020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421599.1)
• Pfam: RNA polymerase Rpb1, domain 1 (PF04997.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;