Ll_transcript_179254

• Id Trinity: FTRINITY_DN58652_c2_g1_i5
• Name Transcript: Ll_transcript_179254
• Sequence: CTCTTTCAAGAACAGAAATTGCCACAAGGTCTCATAAAAGCAATAAAGTTGGATGTCTTAAATGAGGCGGATATAGATAAAATCGCTGCTTTGGAGATAA ATGCAGCCGGGCAGGTCAACTGTTCTGACCTGGGACTCCCAAATCTATCTTCCGAGTGCACAACATGTGGCGGTAAATCTTCGGATAAAAATTCTTGTGA AGGTCATTATGGAGTAATTAAATTTCCTTTTGTCATACTCCATCCATATTTTATGTCAGAGATTGCAAAAATCTTGAACAAAATTTGCCCTGGATGTAAA TCTATTCGACGAGAATTACAGAACAAGGCTGCTCAATTACTCTCTGGATTCAAGCAGTTTAACGGTTGCAAATATTGTTCTGGAAATTCTATGGTTCGCT ATCCAACAATGAAATTTAGAGTTTCCTCAAATGACCTCTATAGAAGAACTGCAATTATAGCTGAGGTTAATGATAAGGCTCCAAAGAAGAAGTCTTTGGG TCTAGGATTGCCTGATGATTATTGGGATATTATTCCTGTAGATGCTCAACAAGAAGAAAGTTGTATAAAATCAAATAGAAGGGTTTTATCACCTGCCCAG GTTTGCTCTTTGTTGACTGATGTTGATCTAAACTTTATTGAAAAATTTGTTCCGCGAAAGGATTTGCTTTGTCTCAAGTACTTCCCAGTGACACCAAATT GCCATCGTGTGACAGAGTTTGCACATGCATTTTGTAATGGAAGCCGGTTGAGTTTTGATGACAGGACCAGAAATTGCAAGAAGTTGGTTGATTTTAGGGG TACAGCTAATGAGTTAAGTTCTCGTGTTTTGGATTGCATGAGGATCTCTAAGCTAAATCCTGACAAAACACCAAGTAATAATATTTTTGCCGAGATTCAG AAAAGAAGAGTTGGTGAAAATGCTTGCAATTCATCTGGTTTGAGATGGATGAAAGATGTGGTTCTTGGAAAACGCAATAGTAGTTCATTCCGTACCGTGG TTGTCGGTGATCCAGACCTTGAGCTTAGTGAGGTTGGATTACCTTGTCAGATTGCAGAAAGTTTGGAGGTTTGTGAACATGTGAACAGGCAGAATAGGGA AAAATTGTTTGATTGTTGTGAGTTACGCATGTTAGAGAAGGGACATATAAAGGTCTGCAGAAAGGGTAATCCAATTAAATTGTTTAAGAAGGAAGACCTT AAGATAGGAGACATATTTTATAGGCCCCTTACTAACGGGGATATAGTGCTGATAAATAGGCCTCCTTCCATACATCAACATTCTATGATTGCCCTCTCAG TTAAGGTCCTTCCGATATCTAATGTGGTATCTATTAACCCAATCTGCTGTTCCCCACTGAGTGGGGATTTTGATGGTGATTGCCTTCATGGGTATATTCC ACAGTCAGTTGGTTCCAGAGTTGAGCTTAGTGAGCTGGTTGCTTTAGATAGGCAATTGATTAATGGGCAAAGTGGTGGAAATTTGCTTTCACTTTCTCAG GATAGTTTAACTGCTGCTTATTTGCTGATGGAAGATGGGGTTCTTTTGAATGTTTACGAAGTGCAGCAGCTTCAAATGTTTTGCCCTTACAAGCTAACAC TTCCTGCCGTTGTAAAAACTCCTTCAAGTAATTCCTCATTTTGGTGTGGCAAGCAATTGTTTAGCATGCTCTTGCCTTCAAAATTTGACTACTCTTTTCC TTCAGATGGTGTTTTTGTTAGAGATGGGGAGCTTATATCTTCTTCTGAAGCTTCTGGATGGTTACGCGATTCTGACTGCAATGTTTTACAGAGTCTTGTG GAACATTTTAAAGGGAAAACTCTAGACTTTTTGTATGCTGCACAGAAAGTTCTTTGTGAGTGGTTGACTATGACCGGTTTTAGTGTTTCTCTGTCAGACT TGTACCTCTCTTCTGACTCCTATGCACGGAAAAATATGATGGAGGAAATCGCCTATGGCTTACAGGAAGCAGAAGAGTCATGTAACTTCAAACAGTTATT AGTGGATGATTATTGTGATTTTCTTTCAGGAAATCTTCAAGATATTACTGTTAAAGTGGATCGTCTGAATCATGAGAGGCAAATATCCCTTTCTCTGTGT CAAGTGTCTGTTGATGCTTTTAGACAGGTTTTTCGAAGTATTCAAAGTTTAGCTGACAAATATGCATGCAAGAACAATACTTTCCTTGCTATGTTCAAGG CTGGAAGCAAGGGTAATTTACAGAAAATAGTGCAACATTCGATGTGTCTTGGCCTGCAGCATTCTCTGGTTCGTTTGTCATACAAGATTCCCCGCCGACT CTCTTGTGCTGCTTGGAATAGACAAAAGAAGCTTGATTCAACCAAGGGGTTTTTCGGAACTCCTCAACCTGTTCAATGTTACATTCCGTATGCTATGGTT GAAAACTCTTTTATGACTGGGCTAAATCCACTTGAATGTTTTGTTCATTCAGTGACAAACCGTGATAGCTCTTTCAGTGACAATGCAGATCTTCCTGGAA TGCTCACACGTAGACTTATGTTTTTCATGCGTGATTTGTATGATGCATATGATGGAACAGTGAGAAATTTATACGGTAGTCAAGTTATTCAATTTGCTTA TGATGCTGATAAGGACTCATCTCCCGATAGCTGTTATCAAGAGTATACCACGGGTGGGGAACCAGTTGGAGCACTTTCTGCTTGTGCGATTTCTGAGGCT GCATATAGTGCTTTGGGTCAGCCAATCAGTCTACTTGAAGCATCACCTCTGCTAAATTTAAAAAGGGTTCTAGAATGTGGTTCAAAGAAAAAAGGTGGTG ATCAGACTGTTTCAGTATTCTTGTCCAAGAAACTTGGTAAACAGAGAAATGGGTTTGAGTATGCAGCCTTGGAAATTAAGAATTATTTGGAAAGGATGAT GTTCTCAGACATTGTTTCTACCGTAATGATAATATTCAGCCAGCATTCTTGCAGCCAAGAAAAGTATAGTCCTTGGGTTTGCCATTTCCATCTAGACAAG GAAATTGTAAAGAAAAGAAAATTTACAATGCATTCTATCATTGATTCTCTTTACCAGAGATGTGACACACTAAGAAAAGAGTCAAAAGTCAATTTTCCTA ATTTGGTAATATCAAGCAAGAAGTGTTCTGCAAATAATGGAAAGGAGGGAGAGGATTGTGTTACTGTTACGATTGTTGAAAACTCTGAGGATTCAATACA AGTCGATGCTGTTCGGGACTTGATGTTACCCTTGCTTCTTGGAACAGCTATAAAAGGATTTCTGGAGATCAAGAAGGTTGATATTCTCTGGAGTAATCCG TCGAAAGTATCAAATTCTAGTAACCGTTCTTTTGGTGGCGAATTGTACTTGAAAGTTACTATGTCTAGTGATGGCAGCCGTGGTAGATTCTGGGGTGTAC TCATAAACCATTGTCACAAGATAATGCATATGATTGACTGGACACGAAGTCATCCTGATAACATTCATCATTTCTGCTCAGCCTATGGAATAAATGCAGG CTGGCAATATTTTCTCCATAGTTTAGCATCTGCTACATCTGATACCGGCAAGGCAATCCTTCCGAAGCATTTGCGACTTGTTGCCAATAGTCTGTCAGCT AGTGGAGAATTTGTAGGACTAAATGCTAAAGGCATGACACGGCAAAGACAACATGCATCTGTTGCGTCACCCTTTGTGCAAGCATGCTTTTCTAATCCAG GTAGTTCTTTTATAAAAGCTGCTAAGTGTGGAGTCAAGGACAACCTCCGGGGCAGCATAGATGCATTGGCTTGGGGAAACTGTCCGTCCATAGGGACAAG TGGACAATTTGATATCTTATATGCAGATAAGGGACAAGAGCTTGCTAAATCTGTGGATGTGTATAACCTTCTTGAGGCCAGTTTTGACCAGCTGAATGAA AAGATTGATACACCTGATGCTCGCAGCTATTCATCTGACAAATATGGTTCTGGGTATAGATATAAAAATGATGGTTATACCATAAAACAGTTTAAGCAGG CAAAAAGCAGTATAAGAAATTTTGTGACTGTGAAGGATATTCAGAAGCTGACTTATGCATCAAGTTCCATACTGAACAATTATTTGATTGATCAGCAACT AAGTGACAGGGACCTGTCAACGATGCTTCGGGTTTTGCATTTTCATCCACATAAAGATAAGAAGTTTGGCACTGGACCACAGTGCATAAAGGTCGGACAG CATCCTATATATACGGATACCCGCTGCTTTTTCATAGAACGAACTGATGGGACTGTTGAAGATTTTTCGTACCGCAAGTGCATTCTGGGTGCTCTTGAGA TTATTGACCCTGAAAAAGCTAAGAGCCAGAAGAAAAGATGGTCAGGAGATAATGTTGAAAATGAAAAGAGCCAGAAGAAAATATGGTCTGAAGATAATGT TGAAAAGGCAAAGAGCCAGAAGAAAAGATGGTGGGAAAATAATGTGTAAGCTGTCTCTATTCATGTCCAAACATAATAAGTGACTGGCATTTAATCTGGT GACAGCCACAGACTTGTAAAATATGAGGGGATGTTTTGTCTGAAGAAATCCTTCTAATGCGCAGTTAGAAGGGTAATAATGGTGCCATAACTCTTACAAA TCACAAAAAAACAACATTGTTTTTCCACTTTTGATTTTAAAGAGTCAACTGTAGGGGAAGCATAGTTGTTTTTTGTGGGTTTAGAGTTATGTCATTGGCA TTACTCCAGCTGAAAGGTGAATAATCTGGAGCCTTCTTTGTTGTATACTATCTCAAAGCTAGATTGGGTAGTAACTTTAATCAAATGTAGCTTGATGAAT TTGTTCGTCCGGTAGAGGCAGTGCTGCGAATCAAGATGAAATTGATAATTATTGTGGCAGCACGGTTTGAAACTAAGAAGATAACGGCCAGAAGGGAGCA TACAAGTTGAAAGGCAAGTGGTAGCACATTTATGTAATATGTAACACTAACTTGTTCCTTGTTATGATGAAGAAAGAATGGGGTCTTTACCTATAGCTTC CTTTTGCTACTTCCACTATTAGTTTACTTGCCTCCGATGACGCCCGGCAGAGAAATATGTAGTGGAAGCAGCAACGAGAAGCTTTTAAAGGATTACCATA GACCAGATGTATTATTGGGTGTGTGGCATTTATATGTATATTTGTTTAGACTATGTTCAAATCCTATGGTGTCTCCTCTGTTCTCCCCTCATGCACACAA ATTGAATGCTAATACCATTTCTTGGTGTATATTTCACCCTTAACGTCCGTGGAAGAGATTTGTTTATTTTTGTGTGTAGTCAACTCCATTTGATGGGATT CAAGTTTTTTGTACCAAATGTTCCATAATTGAATGTAAAGATTAATCTCTTGGGTCTACTGAAGTTTTTTTATGGCACAAGGCAGTG
• Tissue: flowers
• Gene name: LI_gene_78904;
• Additional information: details;

Expression of Ll_transcript_179254

FPKM

• FPAB: 0.5
• FPNAB: 0.5
• LF1: 0.4
• LF2: 0.2
• LF3: 0.2
• LF4: 0.6
• UF1: 0.5
• UF2: 0
• UF3: 1
• UF4: 0.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179254

• Blastp: DNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 49.7% of identity
• Blastx: DNA-directed RNA polymerase IV subunit 1 from Arabidopsis with 49.18% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0086)
• Kegg: Link to kegg annotations (AT1G63020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421599.1)
• Pfam: RNA polymerase Rpb1, domain 2 (PF00623.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;