| Id Trinity | FTRINITY_DN58660_c0_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_179157 |
| Sequence | CCAAGTACCAGTGTCACTAGATCAAAACACTTTCACTTTCACTTTCACTTCCATGGATCTGAATTGAGTTTCCAGAAACTTCCATAGATCCATCATGTCC AATTTCCTCTCTCAGTTCCAAGCTTTCAAGAACACTGTCAATCACCTTGTTATTGCAGTGGAGGATGTGAATGATTTGTGGCCAACTGTGAAGAATGCTT TTGAGGCAAGATTGCCATTCAAAAGGGCATCTTTGAATAACAAGACACGAAACTCTGTCTTCGTTGAGAAATTGCCAGCTGAGTTCATATTAACTACAGA TTCGAGACTCCGAAGTCGTTTCCCGCAGGAGCAATTGTTGTCTTGGTTTCGAGAGCCGTATGCAACTGTTGTACTTGTTACATGTGAGGATCTTGACGAG TTCAAAACCATCCTTAAACCTCGCCTGAAATTAATTGTCCAAAATGATGAGAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATC AGGCGAACAAAATGGCAAAGAAAGTATATGCTAAAATTGAAGTTGAGTTTAGCTCCAAAAAAAGAGAAAGATGTTGCAAATATGATATGCATTTCCCTGA AGCAAACTTTTGGGAAGATTTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGGACAGGCGTGTACAGTTTTATGAGGATGAGATTCGAAAGCTT AGTGAACAGCGTCTCATGCCAGTCTGGAACTTCTGTAATTTTTTCATTCTGAAGGAAAGCTTGGCATTTATGTTTGAAATGGCTCACCTTGATGAAGATG CCTTACGGGAATATGATGAACTAGAACTCTGCTATCTTGAAACAGTTAACATGACCGGAAAGCAAAGGAACTTTGGAGGTGCAGACCATGGGGATGATCA AGCAGCATTGCTTAATCCAGGAAACAAAGCATTGACACAGATTGTCCAAGAGGACTCGTTTAGGGAGTTTGAATTTAGACAATATCTATTTGCCTGTACA TCAAAGCTCTTATTCAAGCTGAATCGTTCCTTTGAGGTTGCATCACGGGGTTATTCTTTCATAATAAGCTTTTCAAAATCTTTGGCATCACATGAGCATA GTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCTTTAATTGAAGCAACAATTTCTCATTATAATGAAGGACATGTGGTGCCTGA CATAGAGAAGGAGTTCTTTCGTCTTCTGGGTGACCTGTATTCACTTGCTAGAGTTAAGTTCTTAAGAATTGCATATTTAGTTGGGTATGGAACTGATATA GAAAGAAGTCCTGTCAACAGTGCTTCTCTCAGCTTACTTCCTTGGCCTAAGCCAGCAGTTTGGCCTTCTGTTCCCGCTGATGCATCAGTAGAGGTGCTTG AGAAAGAGAAGCTGATTCTCCAAACAACTCCTAGAACCAAGCACTTTGGTATCCATAGGAAACCCCTGCCTCTTGAACCTACTGTACTTCTACGAGAGGC CAACAGGCGGAGGGCTTCACTTTCAGCTGGAAATGTGTTTGAAATGTTTGACAGTCGTCAGGTTACATTGGATGGATCACCATCACAAAAACTACATGCA AGTTCCATGATACGTACTTATTCTTCACCAGGAAACGTTGATAGCTCAATTGACCGACCTATGAGGCTTGCTGAGATTTATATAGCCGCTGAGCATGCTT TGAAGCAAACCATTTCTAATCCAGAACTGTTGACATCATTATCATCATCCGAGGAGTTTGAGGTATCAACATGGGCTGAAGTCAGGAGTGCATGAAATGA TTCTCAAGGATCTCTTCTTGAGAGCTTCTCATCGTGTCTCTGATTGTTTGTTTTATTAATTTTTCCCTTATGAACAAATATTGAGTACTTGTAACTATTT TCTTGATATCACTTCTGGTGCTAATTGGGCTTCATCTTCATTTATCCCATACTTGTTTGTTCCATGCTGGCAGCAAAAATATTTGGAGCTAACTAAAGGT GCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGCTAGCAGCAGTCGCCTTTAAGCATGGACATTTTGATCAAG CTGCAAAGTCATATGAGAAGGTTTGTGCACTTTATGCTGGTGAAGGATGGCAGGACTTGTTGGCTGAGGTCCTTCCCAGTTTAGCTGAGTGTCAGAAGAT ACTCAATGATCAAGCTGGCTACTTACTATCCTGTGTGAGGTTACTTTCTCTTGATGAAGGACTATTTTTGACCAAGGAGCGTCAAGCGTTTCAGTCAGAA GTTCTACGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATTACATTTTCTGGCAATCCTGGGCCTCCGATGGAGTTAT GTGATAGGGATCCTGGTTCCCTTTCTGTAACTCTTTGGAGTGGTTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAACACCAACACACAA TGCTGATGAAGGTGTAAAGGCGTTGAAGAGTTCTACAGCTATTGTCTTGCATCCTGGTCGGAATACTATTACCTTGGATCTACCACCTCAGAAACCAGGG TCATATGTTCTTGGAGTTCTTACTGGTCAGATTGGACAGCTGAGTTTTAGATCTCATAGTTTTTCAAAAGTTGGTCCTGCAGATAATGATGATTTTATGA GTTACGAAAAGCCAGCTAAACCTATTCTGAAGGTTGCCAAACCTAGAGCACTCGTTGATCTTGAAGCGGCTGTTTCATCTGCCTTGTTAATAAATGAGCA TCAATGGGTTGGCATTTTAGTTCGACCTATAAATTACTCTCTCAAAGCTGCTGTCTTGCATATTGATACTGGTCCCGGATTGGAGATTGAAGATTCACAT GTAATTGAGATGGAAAGCTATTCCAGTGTATCACAGAATGATGATGTACAGGTTCAGAAAGACGGTTCTCTAATAGGATCTTTGAATTCTGGAAAAAAAT TTGAACGTTTGTCTCTTCAAGATGGTAAAATAGAGTTTCCAAATTGGGCAAGTGAGACACCTTCTACTCTTTGGGTTCTGATTCGAGCCGTCAGTGAGAC GCTCAGCAGAGGATCGTCTTCAGCCGCAACTAGAAGTGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGTATTCCACAAT CAGATATTTGAAAGGACCCTAGCAGTTCATTTTACATATCCTTTCTATGTTACAACGTGTGTTACTGATAAATGCAATGACGGTACCCTGCTTCTTCAGG TTATACTTCACTCTGAAGTAAAGGCTAAACTGACCATATATGATGCCTGGCTCGATCTTCAAGATGGATTTGTACATAGTGGAGAAACGGAGGGTAGACC TACTTCAAGTGACTTCCCACTAGTCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTTGGCAAGACAAATGAACAAGAAGCCAGAAAG CAATCAGAAAGCATATTAAATATCAGATATGGAATTTCCGGCGATAGAACAATTGGAGCCCACCCTCCTCTCATGAATGAGTCTACTATAGTTGATGGTG CCAGACAAGAGATGATCTTCAGGAGCGTTATTACTTTGCAAAAGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCCT AAGAGTTGGGCAACTAGTCAAGATGCAATGGAGGGTGGAAAGGTTAAAGGATTTGGATAAAAAAGAAATCTCTGAACAGAATGCTGAAGTGCTATATGAG GTAAATGCTAATTCAGGAAATTGGATGATAGCTGGGAGGAAAAGAGGGCATGCATCTCTCTCTACGAAACAAGGTGCAAGGATCGTTATCTCAATTTTAT GCATGCCACTGGTGGCTGGTTATGTACACCCGCCAATACTTGGGCTACCGGATGTTGATGACACTGATATAAGCTGTAAACCTGCCGGACCACATCTTGT TTGTGTTTTACCCCCAGCTCTCAGCTCATCCTTCTGCATTCCAGTTAATTCATGAGCTTAGCAATCCTTTCCACTCAACTTTCATTGAGTTTTTGTGTTC TATTACCAGTCTGAGAAAATTTTACTTAGGTTCAGTCAAGTAGCAAAGTGTGACATTTCCCTTAGCATGTTTTCTTTGTTGTGTGAAAATCTCCATAGGT GGATTTGTGTTGCTTATGGCCTTTATAGGCAGTGTTCAGAGTATCAGCAGCAACTTTAGAGCGCATGTAGGAAATGTGTGCTCTTACTTGTACACCATAG AATAGATAGAGATCATTGCATTCTTTTTGTCTCATGAAATGATAAAATTTGGCAGGAACAAAAATGTTCAAACTTTGTCAATTTTACTCGCTCCTTGAAA ACCATAATTGCCAATTCACAATGACTTCAATTTTTTTTTTGCCTTAAAACGTTACTCAATTTCATAATACCATTTTTGTTGGAAATAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78969; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179157
| Blastp | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 76.64% of identity |
|---|---|
| Blastx | Trafficking protein particle complex II-specific subunit 130 homolog from Arabidopsis with 69.81% of identity |
| Eggnog | trafficking protein particle complex(ENOG410XNVF) |
| Kegg | Link to kegg annotations (AT5G54440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019443977.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |