| Id Trinity | FTRINITY_DN58663_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_179195 |
| Sequence | CCTGATTTGCCATTACTACCTCTGTGATTCCACCTCCAAAAACAAAATCCACACAAAAGTGATTCTCCTCAACCACTATTTCACCACACCCCACAATTAT AATCCTACTCCTAATTAAAAAAAATTAAACTTTTATCTAGATTTTAATTCAAACAAAGTTAGCAGCATTTGGTGCGTAACCGTGCTGGTGAAGGGGAAAT TCTGAAGTCGTTGTTCTTTCATTTTCTGATCAACTTCTACGTCTCACTAACTTCGTCGTTGCAACTCGCTTGACTTCTTTTGAAGCAACCTTTTTCCTTT CTTATCCTATCCCCTCCCCATGTTGGACTTTTGTTATAATCAGCTGCTTCAACTTCCATTTGGGTCGTTCAATTTCACTTGAATTTTTGTTATTTGAATG AGAAATGGTGTGTTTGGGTTCTGAAATGGTTGAAAGGTTGGAACTTTGGTTTGTTAAGTGGAGGATTGCATTTGGGTGTTGTGTTTTTCTCTTGTTTCTT AGTCCAGTAATGGGTTTGAGACCTTTGAGGGACAAAACTGGTTCAATGGGCGATGAGTGGCTTTTTTCAAGAAGAGATGAAAGTGACTCAGGTCCATTTT CCGAATGGAACATAACCGGAACATATAGAGGGAGTTGGAAATTTTTAGATACCACAAATGGCTCTTCCAAATTTCCAGACATCAGAAAAACAAATGGGAA TTCTGTAATTGAGTTGGCCAGTACTCCCACAAAGATTACTGGTGTTCATTATGTGCAGGGGGTAGTTTTGTTCCATGACGTGTTTGACAAAGAATACAAT GTTGGTGGGTCCCAAATCAGAATAGAAGGTGTATATATATGGCCTTTTAGGCAGCTTCGAGTGGTAGCCAACAGTGGAAAAGAGGGAGTGTTGAATCCGG GTGATGATTATCTTTTATCTAATCCATACCATCTGCTTGGAATTTTCTCATCTCAAGTATTGCAAGAATCTTCACCAGATAGGATGTGGAGAAGAAAATC TTCTCCATTGCATGATATGGAAAAACATTGTAATGTTGAAATTGCTGCACAGGTTTCACGCTTGCCATCATCAAAACATGGAGGGGATTCTTTTCACTTG GAGGGGTTAATGGAGAGCCCGTCCGTGGAGGATGATGGAGAGTGCTTCTCTCCTTTACAGTTAAATGCATCATCTGTTAACGTAGAAGCTTACTACAGTA AAGCAGTGAACTACACATTGATGGTTACTTTTGTCTCTCTCTTGCAAGTTCTTCTATTGATTCGGCAGATGGAACACAGCAACACTCAATCTGGGGCTGC TAAGGTTTCAATTTTAATGGTTGGTCAGCAAGCTATAATGGATGCTTATCTTTGCCTTTTACATCTCACTGCAGGAATAGTAGTTGAATCGTTGTTTAAT GCCTTTGCAACCGCTGCATTCTTTAAATTTGTGGTTTTCTCAATATTTGAGATGAGATATATTCTTGTCGTCTGGAAGGCAAGTAGGCCTTTGAGTAACG GGGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCAGCTTTATACAGGCGCTTATGTAAGTGTACTAATTTTGAATTGAAGTTTCCTCTGCAATCTGATTT CTTCACTGTGGTTTGCCATCCATTGATTGGCTCTGTGATCACATTATGTTATTTCCTTAACGATTTAAGTCATTTAACTGTCTGAAATTATCACTCTACT TATGAGCCAGCCAACTTCGGGTTGATTATTGTTTGCTTACTTGGAAATATTAATGTAATGTATAAAAATATAATAAATGCTGGTTAAATTGTCCTTACTT GAATATCTCTTTACAATTCTGTTTTGTTATCTATGAATTTCACATATGGTTGAGACGTTGACTATATCTGCTTTAGGACAGCGAGAACCTATAAAATTAA AACATGCATGAGTGAAGGGTCGCCATGTTAAAATAAGCATAATGGAATGGCGAATATCTGACTGTATAGTAATTATTTATTTTCATTTGAGCTACCACCT TTGTAGTTTGTACCTTAGAATCTTAGAGTGTCCATATACAAATATTTTTCTATGCCACTCCAGTGTTCAAGCATGCCAGATAACTCTAGTTATTTGTTTC CAGCTGTTTCAATTGATTTAAAGATTTCCTTCTATGAAGTGTGGTTCAGATCTAACTGTTCAACTTCTCTTTCAGCTGGGATCCTCTTTGCAGGCATTCT GCTCATGTATGAATTCCATTATTATTTGAAACCTATTCTTCTTCTTGTATACTCCTTCTGGATACCTCAGATAATCACCAATGTTGTTCGCGATTCACGC AAGCCATTGCATCCTCATTATATCATAGGCATGACTGTTACTCGGCTAGCAATACCATTATATATTTTCTGTTGCCCTGACAACTTCATGCGGATAGAAC CAGACCAGAGGTGGTGTGTCTATCTGACTGTATTTGTTGGACTTCAAGCTGCAATTCTTCTACTTCAGCACTACCTTGGGTCCCGTTGCTTCATTCCTCA CCAGATTCTACCCGAAAAATACAGCTATTATAGGCGGTTTGCTCAAGATACAAGTCATGCTGCAGATTGTGTTATTTGCATGACAACCATTGATCTTAGT CCTCCATCTAATGATTGCATGGTGACTCCATGCGATCATTTCTTCCACTCCGTCTGTTTGCAAAGATGGATGGATATAAAGATGGAGTGCCCAACTTGTC GGCGCCCGCTTCCACCGGCCTGAAGAGATTTCCACTCTGTTCATACAAATAGGATCAACTGACCCTGCCCAACTTCATAATTTTGGTTGGGATAGAATCA ATATTCAGTACAATTCTTCTCATAATTGTATAATGGGGCATTGGTTTGTAGCTGATTATGTTAGTGATATTTTTTTTCTTCAAAATTTTAGTGGGTAGTA CGTGCATTATAGATTATATAACATAATCTAATTTTTTGGCTTCAATTCCATCCTCTATGCATCAATTTATTTTCTAATTCCACACATAGTAGCCTTTGCC ATGATGTGAAAAGTACATTGTGTAACATCCAAATAGCAATTATGAAGTTAAAAGTACTTATAAACACTATACTTTTTCGAAACATGCATTATCTAAAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_78988; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179195
| Blastp | DSC E3 ubiquitin ligase complex subunit 1 from Schizosaccharomyces with 30.43% of identity |
|---|---|
| Blastx | Transmembrane E3 ubiquitin-protein ligase 1 from Saccharomyces with 32.49% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBC947.10) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464855.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |