Id Trinity | FTRINITY_DN58663_c0_g1_i20 |
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Name Transcript | Ll_transcript_179211 |
Sequence | AAACTGGTTCAATGGGCGATGAGGTTTGTCTGTGTTGATTATGGTAGTTGTGGATGCATATTGAGAATGGCTTTTTTCAAGAAGAGATGAAAGTGACTCA GGTCCATTTTCCGAATGGAACATAACCGGAACATATAGAGGGAGTTGGAAATTTTTAGATACCACAAATGGCTCTTCCAAATTTCCAGACATCAGAAAAA CAAATGGGAATTCTGTAATTGAGTTGGCCAGTACTCCCACAAAGATTACTGGTGTTCATTATGTGCAGGGGGTAGTTTTGTTCCATGACGTGTTTGACAA AGAATACAATGTTGGTGGGTCCCAAATCAGAATAGAAGGTGTATATATATGGCCTTTTAGGCAGCTTCGAGTGGTAGCCAACAGTGGAAAAGAGGGAGTG TTGAATCCGGGTGATGATTATCTTTTATCTAATCCATACCATCTGCTTGGAATTTTCTCATCTCAAGTATTGCAAGAATCTTCACCAGATAGGATGTGGA GAAGAAAATCTTCTCCATTGCATGATATGGAAAAACATTGTAATGTTGAAATTGCTGCACAGGTTTCACGCTTGCCATCATCAAAACATGGAGGGGATTC TTTTCACTTGGAGGGGTTAATGGAGAGCCCGTCCGTGGAGGATGATGGAGAGTGCTTCTCTCCTTTACAGTTAAATGCATCATCTGTTAACGTAGAAGCT TACTACAGTAAAGCAGTGAACTACACATTGATGGTTACTTTTGTCTCTCTCTTGCAAGTTCTTCTATTGATTCGGCAGATGGAACACAGCAACACTCAAT CTGGGGCTGCTAAGGTTTCAATTTTAATGGTTGGTCAGCAAGCTATAATGGATGCTTATCTTTGCCTTTTACATCTCACTGCAGGAATAGTAGTTGAATC GTTGTTTAATGCCTTTGCAACCGCTGCATTCTTTAAATTTGTGGTTTTCTCAATATTTGAGATGAGATATATTCTTGTCGTCTGGAAGGCAAGTAGGCCT TTGAGTAACGGGGAAGGTTGGGAGACAATGAGGCGTGAGCTTTCAGCTTTATACAGGCGCTTATGTAAGTGTACTAATTTTGAATTGAAGTTTCCTCTGC AATCTGATTTCTTCACTGTGGTTTGCCATGATTGGCTCCATTGGATCCATGATCGCACTGATATTTCCTTAACGATTTAGCTGTAATAGTCGCTCTACTT CTAAATGAACTTCCCAACTCTAGGTTAGTTGTTTTTTATTTATAAAAAATATGTTGCCTGCTTGAAAGTATTATTGGGATAAATAAAAATAGAATAAGTT CCGGTTAATTGTCTATACTTGAATGGCTTTTTGAAATGCTGTTTTTTTATCTACGAATTTCAGGTATTATTGATTATATTTGCTTTTAGGCCAACATGAA CCTATGAATTATAGCATTCATATGAGCCAAGGGTAATGATATTTAAATAAGCATTACTGGATGGAAAATGTCACATAGTATAGTGATTATCTATTTTTAT TTGGGCTGCCCACCTTCGTACAGTAGATTCGTAAGAGTATCCATATCCGAATATTTTGTATCCCTCTCCGGTGTTCAAGCATGCTGGATAACTTGGGCCA TGTGTTTCCATTTTTTCAATTGGTGCAAAGATTTCCTTGTATGAAGAAGTGTGGCTGAGATATAATTGTTTAACTTATTTGCAGATGGGGTCCTGTTAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_78988; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_179211
Blastp | DSC E3 ubiquitin ligase complex subunit 1 from Schizosaccharomyces with 30.77% of identity |
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Blastx | - |
Eggnog | - |
Kegg | Link to kegg annotations (SPBC947.10) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464855.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |