| Id Trinity | FTRINITY_DN58664_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_178177 |
| Sequence | CAATTACAGCAACCCCCAAGATGGTTGGTTGTTTCTTTCTCTTGTTAAGAATTTTGGTTTAATCAAAGTTTGACTATAATTTCATTTATAAATTGTGTTC AATGATCAATCATCAGTGTTTTTTATTTTTGTGTTAATTCCTTGATGAGAGATTTATGCTAGCTATTAGTTTTTATGTACTGCTTTGTGATGGTGAAATT GGAAAGGTAGAAATAAGTAAGGGAGTGTTCAAATGGCATATTTGCTATATGAAGATGTGTTGGTAATGCTTGTTATCTTAATTGATGCTTTTAATTTCTA TTAATGCGAGAGTGGGCTTTTATTGCTGCTCATCAAGCAGGTGTGATAAATTTGTTCTGGCATGATTTATTTTGTTGCTTTATAAATATTGATGTGCTTG CAAACAGACTTGCATGGTTGTGAATTGAATTTTTTGTTCACAGTAAAAGATGAAAACTTTGCATATTGTGTCCAAAGCTAAGCTTTTCTTAGTCAATTGT TTTGATGTTTGATTCTCCGGAGAGGGATAGCGTGTGGATTTTTTACTGCCTTTTATGTAATATGAATTTTTTAGGAAAGATATACCTTTTTCTATGTTTG GTAGAGCTTCCTTTTTCTTCTTATTTTTGTATTATGAGTTTTTTTATAATCTAAGCTTGTTTGCATAACTAGCTTATATTTATAAAGAAGCTTTTTACAA AGCTTCAAATAGGATGGGTTGTTTTTCCAGATTATAATCACAGATAAGTATAATCATAATCTAATTTCTCTGGCTATACCAAAAACTTGCTTGAACTACT GGATGAGTTAATGTAAACTTGGCATTTTTCATTTGCGGGAGGAAGGCTTATTTGGAAGAGTGAGCTGTAGTAGCTTATGCTATAAATGCAGTATCTTATG GTAGCAACTAGCAACAAATCTTGATGAATGATGTAGGGTAATTGCGGGGTTGCCATGTTCTTCAGTTGGTGGGTTTTTACCAATAATGAGAAATTGAGGC TACTTTTGTAGTTAAAGTTAACTAAATCCAGCATTGCAAATTCTGCTTACCAGAATGTCCTGGATGGTGTATGGCAGGAAACCTGAACCAACACTGAGCA TGCTTAACTTTATTCCAAATGTGTGCCATTTTGCTTATGGAATTTGCAGTCTAAGCCTGGTTGTGGACTTGTGGTTCTTGGTCGAGTTCCAAACTATGAA GTAATCAGGTTTTCTGCTGTCAAGGAGCTAAGATCACATCATTTCATATAATATAATGTGAAATTATTGGCTAGATATCAGTTAGTTACCCTTAAAAAGG AACCAAAACTGACATATACATCCCCATGAATTCCTTAGTCCTTTAATGCTACATGGTTTGCCACAGGAACTAATATACATTGCATTTCGAACTTAAGCAG GATATGAAGTTCATTATTAAAATATTTTCAGGGATGATTTGTGTTCGTCATTGTGATCCATCTGATATTTATTGACTTCATACATTATAAGGCGTGGTTT GAAGAGTTATAACTATGTCGTGAAAACTTCGTTTAATGTGATTCTTACTAATCTAATTAGTTTTTGTACTCATTGATCTGGTCTTCACTTATGGTTTCTA CACGTGAGTAATAGACTGATAGTTTAATAGTTTTATGATGTTTTTGTAGATTTTTATCTATGTTTGGTTCCCTCTTTTTTACTTGCTGTTAGTAAGATAC TCGCTACATGTTTACAGCTGCCAGATCATTGGATGTCTTGAATTTCACTCCTCTCAATAACAAGCCCATCCGCATCATGTATTCTCACCGAGATCCTAGT GTTCGTAAAAGTGGAGCAGGAAATATTTTTATCAAGAATTTGGACAGGGCAATTGACCACAAGGCATTACATGATACATTCTCTTCATTTGGGAGCATCC TTTCTTGCAAGGTGGCTACAGATTCATCTGGTAACTCAAAAGGCTATGGCTTTGTACAATTTGATAATGCAGAATCTGCCCAAAAAGCCATTGAGAAGCT GAATGGTATGCTGCTGAATGATAAACAAGTTTACGTGGGACCCTTCCTTCGCAAGCAAGAGAGAGAAGGTTCAGCTGACAAGGCAAAATTCAACAATGTT TTTGTAAAGAACCTAGCTGAATCAACCACTGATGATGAACTGAAGAAGGTTTTTGGTGAGTTTGGACCAATTACCAGTGCTGTTGTGATGAGGGATGAGG ATGGGAAATCAAAGTGCTTTGGATTTGTGAACTTTGAGAATACTGATGATGCTGCTCAGGCTGTTGAGGCTCTTAATGGCAAAAAGTTTGATGACAAGGA GTGGTATGTTGGAAAAGCTCAAAAGAAATCTGAAAGGGATCATGAGTTGAAACTTAAATTTGAGCAGAGCATGAAAGAAGCTGCTGATAAATATCAAGGG GCAAACTTGTATGTCAAAAATTTAGATGATAGCATTGGTGATGAAAAACTTAAGGAGCTGTTCTCCCCTTTTGGTACCATTACCTCTTCCAAGGTTATGA GAGAGCCCAGTGGAATAAGTCGAGGATCAGGGTTTGTTGCATTCTCAACCCCTGAGGAGGCATCTAGAGCTCTCTTGGAGATGAATGGCAAAATGGTGGT AAGCAAACCTCTGTATGTGACTCTGGCGCAAAGGAAAGAAGATAGAAGAGCTAGGCTGCAGGCTCAATTTGCCCAGATGCGCCCTGTTACAATGTCACCG TCTGTTGCTCCTCGTGTGCCAATGTACCCCCCTGGTGGTCCAGGTATTGGTCAACAGATATTTTATGGTCAAGGCCCTCCTGCCATGATTCATTCCCAGC CTGGATTTGGGTATCAACAGCAACTTGTGCCTGGTATGAGGCCTGCTGGGGCTCCGGTGCCAAATTTCTTTATGCCAATGGTTCAGCAGGGACAACAGGG GCAGCGTCCTGGTGGAAGACGTGCAGGTGGTGTCCAGCAGTCCCAGCAGACGGTTCCTCTTATGCCGCAGCAGATGCTTCCTAGGGGACGTGTGTACCGC TATCCTCCTCCGGGTAGGGGTATTCCTGAAGTTCCCATGCCTGGAGTTGCTGGAGGCATGTTTTCTGTTCCATATGATGTGGGTGGGATACCTATTCGTG ACGCAGGACTCTCCCAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_78999; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_178177
| Blastp | Polyadenylate-binding protein 2 from Arabidopsis with 73.03% of identity |
|---|---|
| Blastx | Polyadenylate-binding protein 2 from Arabidopsis with 77.38% of identity |
| Eggnog | poly(A) binding protein, cytoplasmic(ENOG410XR5X) |
| Kegg | Link to kegg annotations (AT4G34110) |
| CantataDB | Link to cantataDB annotations (CNT0002568) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445806.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |