Ll_transcript_179601

• Id Trinity: FTRINITY_DN58677_c1_g1_i17
• Name Transcript: Ll_transcript_179601
• Sequence: ATTTGGACGAGTTAAAACAACACAACTCACCCTAACTCGCTTCATTCCATTCCCTTTCTCTCTATTTTCTCTCTTTCTTTCAACTACTTCACCCTCTCCT CATTCATCACTCAGCTACATCTTCTTACACCTTCTCATTCTCATTCACACTTTTTTCGATTTTTGCATGTGATGTACATACCAACACTTTCATAGTTGGA TAATGGCTGTCGAGACTAATGATAAAACGAGTTTGCCACTTGATTTTGGTGATGACGATGGGCCAGTAACTTTTAAACGATATACATCATCCAAGAAAAA ACAGTTGCAATCCGAATTGACGAAGTCGACTTCTAATAGTCTTGACGGACAGTCAAATAGACAGAGTTCAAATGTGCCTTCTTCAAATGGCCAATCTTCT AGCACCCCAAAGGGTGATGTTGTCCCATCTGCTAAGGCATCAGCCGTGAAATCTCCTGTAGGAAACTCTAAAGCATCTAATTCACTTGTCAATCCTGCAT CTGTTAAGTTGCCTGTAGCAAATTCAAGATCACATTCACTAAATGATAAACCAAAGTCTGTTCCGGAACAAAAGGCGTCCATTGATATTAAGGAGGAATC AAAATTTATCAAACATTGTACTAAGGATTATGCTGAAGATTCAGAAGATGAGGAGGATAATAAACCATTAAGTGCTAGGTTGAAGGTGAACTCTAACATC GACAACAAAGCAACCCCGGTTGTTGTTAAGAAATCTTATGAAGACTCTGATGATGACGATGATATCCCTTTGTCAGCAAAGTTATTCCGGAATTCTAACG TCGGAACATCCAGTGGTAACTATGATGACCCTGATGAGAAGAAGCCTATTTCAAAAGTTCAGAAAGAGCGGCAAAATGGTTCCAGTGCTAGCAATAAACA GGGAAAGCCGTCTACAGTGCCAGCTAAGAGACCACTAGATAAAAGTAATTCTGTGCACTCTCCAGTTAAGAAGTCCAAGGTCTCAGATCCAGCTGCATCA ATCAAAACTAAACAAGTCTCTTTGAAATGTGAGCCGAAGGTGGATGATGACGATGATGATGATATTCCTATTTCCCAGAGAATAAAGAAGTCGGCTACTT CAGCTGATAAATCATCTTCCATAAATAAGAAGGCGGCTACATCAGCTGATAAATCATCTTCGATAAAGAAGAATTTGGCAAAGGTTACTAAAGTTAACAA GGCTGGTAAAACATCTTTTAAGAAACAGCCAAAGAAGTTAAAAAAATCAGGCAAGGGTTCAGATTATTCCAAATCTATGAAATTTCTTCCTGGTTCTGGC GATGGACAGAAAAAGTGGACTACTTTGGTTCACAATGGTGTCATTTTTCCTCCTCTTTACCAGCCCCATGGGGTAAAGATGCTCTATAAGGGGAAACCGG TTGATTTGACTCCTGATCAAGAGGAGGTTGCTACAATGTATGCAGTCATGCGAGATACAGATTACATGCAGAAAGATAAGTTCAAAGAGAATTTCTGGAA TGACTGGCGTAAGTTGCTAGGGAGAAATCATGTAATTCACAACTTGAAAGATTGTGACTTCACTCCAATCTATGATTGGCACCAAAGTGAAAAGGAAAAG AAGAAACAAATTACTACAGAAGAGAAGAAGGCCCTGAAGGAGGAGAAAATGAAACAGGAGGAGAAATTCATGTGGGCTATTGTTGACGGTGTTAAAGAGA AGGTTGGAAATTTTAGAGTTGAACCACCAGGATTGTTCCGAGGCCGTGGAGAGCATCCCAAGATGGGAAAGTTGAAACGACGCATTTGTCCAAGGGATAT CGTCATTAATATTGGAAAGGATGCCCCAGTTCCTGAATGTCCTATTCCTGGTGAAAGATGGAAGGAGATAAGACATGACAATACAGTTACATGGTTAGCG TACTGGAGTGACCCTATCAATCCAAAGTTATTCAAATATGTGTTTCTGGCAGCTAGTAGTTCCTTGAAGGGACAAAGCGACAAGGAAAAGTACGAGAAAG CTAGGATGTTGAAGGATTATATAGAGAACATTAGGGCTGCATACACAAAAGATTTTACAAATAAAGATATCACAAAGCAGCAGATAGCTGTTGCTACGTA TCTTATTGATAAACTAGCTCTGAGGGCTGGCAATGAGAAGGATGATGATGAAGCTGATACTGTTGGTTGTTGCACATTAAAAGTAGAAAATGTAACAAGA GAAGCCCCCAACAAGTTGAAGTTCAACTTCCTTGGTAAAGATTCAATCAAGTATGAAAATACAGTTGAGGTCGAGCTTCCTGTTTATAATGCAATTTTAA AGTTCCAAAAAGAAAAAGGCCCTGGCGATGATCTTTTTGACATGCTGGATACAAGTAAATTAAATGCCCATCTGAAGGAACTCATGCCCGGACTAACAGC AAAAGTCTTCCGTACATTTAATGCATCTATCACATTGGATGACATGCTGAATAAGGGAACTAAAGGTGGAGATGTTGGAGAAAAGATTGTTGTTTATCAG CATGCAAACAAACAGGTTGCAATCATTTGTAATCATCAACGTAGTGTTTCAAAATCTCACAGTGCACAAATGTCGAAGTTAAATGAAAAGATTGATGAAC TTAAGGCTGTTCTAAAGGAGCTGAAAACAGATTTGGACAGGGCAAAGAAGGGAAAGTCCCCTTTAAAGAGTTCAGATGGAAAGACAAAAAAGAATTTAAA TCCCGAAGCGTTAGAGAAAAAGATAGCTCAAACAACTACAAAAATTCAGAAAATGCAACGTGATATGAACGCAAAAGAAGATCTAAAAACCGTGGCATTA GGCACGTCCAAGATAAACTACCTCGACCCCAGGATCACAGTGGCTTGGTGCAAACGACATGAGGTTCCTATTGAAAAGATTTTCAACAAATCTCTTTTGG CAAAATTTGCTTGGGCAATGGATGTAGATCCAGACTTCAGATTCTGAGATCTATGGATGGAGACATGCTGCTATGTGGCTGACAAAACATTTCTTTTATT CATTTATTTTCCATAAAATAATTTTTCTGTTTCTCTTTGTCAATCTTAGCTGAAAATTATGTTGTATTTGTATGTACATCTAATCTAATTATGGGGTAAG TTGTCCCCTTGAGGAATGAAATCACAATTCAGGCAATAACATGTAAAATAGATTTAGAGCTAACAAAGATGATTTTGATTCAGTTGTTGTTAATACTATT CATTTGATGAATATCTTTGTACTAAACTCTACTAATGTTGCTTTTTTAAATTATTTATGTTTATGTTAAAA
• Tissue: flowers
• Gene name: LI_gene_79114;
• Additional information: details;

Expression of Ll_transcript_179601

FPKM

• FPAB: 1.6
• FPNAB: 0.8
• LF1: 0.8
• LF2: 3.2
• LF3: 3.2
• LF4: 0.9
• UF1: 0.5
• UF2: 2.2
• UF3: 2
• UF4: 1.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179601

• Blastp: DNA topoisomerase 1 alpha from Arabidopsis with 63.46% of identity
• Blastx: DNA topoisomerase 1 beta from Arabidopsis with 78.32% of identity
• Eggnog: Dna topoisomerase(COG3569)
• Kegg: Link to kegg annotations (AT5G55300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413101.1)
• Pfam: Eukaryotic DNA topoisomerase I, DNA binding fragment (PF02919.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;