Ll_transcript_179586

• Id Trinity: FTRINITY_DN58677_c1_g1_i6
• Name Transcript: Ll_transcript_179586
• Sequence: CATAGCTATCTTGTCACTCATCTTCCCTATCCCTATCCCTATCCCTATTCCTATTCCTATTCCTATTTTCTCACCTCTCATTAGCTGCACCGTTTCTTAG TTCAAACGCCAACACAAACCTTCATGAACAACAATCTCATCGCTTTTGAATAAGATGTTATGTACATGCCGACACATCCATAGTTGAATAATGGCTGTTG AGGCTTCTGATACACAACACATGTTAGATGGTTTATATGATGATGATGACGACGATGGGCCAGTAACTTTCAAAAGGAGCACAACATCTAAGGTAAATCA GACGTGTTCGGAAGTAAGGAAGTCAACTTCTCGTAACCATGATGGACAGTCATATAGACAGACTTCTGATGTACGTACTTCAAATGGCCAAGGTTCTGGC TTACAGAAGGGTAGGCGTGTCTCATCCGGTATGGTATCACCTACAAAATCTTCTAAAGCGCCTACTTCAATTGCCCAAGGTTCTAGTTTACCCAAGGATA AGATTGTACCATCTGGTATGGTGTCACCAAAGAAATCTTCTCAAGGCATCTCAAGAGCATCAAGTTCACACGTCAATGCCTATCCTGTGAAGTCACCTAT AGAAAATACAAAATCACCTTCTTTAGGTGATAAACCAAAGCCTTCTCCGGAATGGAAAACTCCAAGTGATGTTAAGGAGGAAAATAATTGTACCAGGCAC CTTACTGGAGACAATTGTGAAGACTCTGAGGATGAGGATAATAGAGCATTAAGTGTTAGGTTGAAGACGAACTCTAACAATGCTAACAGAGAAGCCGTTG CTGTTCTTAAGAAATCTTCTGAAGACTTCGATGACGATGAAGATGATATCCCTTTGTCAGCAAGGTTGAAGAATTCTAATTTGGGACCATCTAGTAGCAA GTATGATGATGCTGATCCGAAGAAACCAATTTCAAAAGTGCAGAAAGGACTAAAAGTTGGTTCCAGTGCTAGTATCAAACAGGAAAGGCCATCTACATTG TCAGTTAAGAGGCCACTGGATAACAAAGCTTCCTTGCACTCGTCAATTAAGAAGCCAAAACTCTCAAATCCAGATGCATTAAGCAGTGCTAAGCAAGTAC CAATGAAACCTGAGTCAAAGGTAGAGGATGATGATGATGTTCCTATTTCCCAAAGAATGAAGTTGTCCACATCATCTGATAAATCATCTTCCTTGAAGAA GTCGAAAAATGTCACTAACGTTAATAAGGCTGGTTCGTCTTTTAAGAAACAGGCCAAGACGTTCAAAAAATCTTCCAATAACTCAGAATATTCCAAATCT ACTAAACTTCTTCCTAGCTCTGGTGATGGTCAGAAAAAATGGACTACTTTAGTTCACAATGGTGTCATTTTCCCACCTCCGTATCAGCCCCATGGGGTAA ATATGCTCTATAAGGGGAAACCAGTGGTTTTGACTCCTGAGCAAGAGGAGGTTGCTACAATGTTTGCAGTCATGCGAGATACAGATTACATGCAGAAAGA TAAGTTCAAGGAAAATTTTTGGACCGACTGGCGCAAGTTGCTAGGAAAAAATCACGTTATCCAGAATTTGAATGATTGTGACTTTACTCCAATCTATGAT TGGTGCCAAAGTGAAAAGGAGAAGAAGAGACAGATGAGTTCGGAAGAGAAGAAGGCTCAGAAGGAGGAGAGAGCTAAACTAGAAGAGAAATACATGTGGG CTATTGTTGATGGTGTAAAAGAGAAGGTTGGAAACTTTAGAGTTGAACCACCAGGGTTGTTCCGAGGCCGTGGAGAGCATCCTAAGATGGGAAAATTGAA ACGCCGGATCCGTCCAAATGATATCGTAATCAACATTGGAAAGGATGCACCAATTCCTGAATGTCCTATTCCTGGAGAAAGTTGGAAGGATATAAGACAT GACAACACAGTTACATGGTTAGCCTTCTGGAATGACCCAATCAATCCAAAATTATTCAAATACGTGTTTCTGGCAGCTAGTAGTTCATTGAAGGGGCAAA GTGACAAGGAAAAGTATGAGAAAGCTAGGATGTTGAAGGATTATATAGGGAACATTCGGGCTGCATACACAAGAGATTTTACTTGCAGAGATATTACTAA ACAGCAAATAGCTGTTGCTACTTATCTTATCGATAAACTAGCTCTGAGGGCTGGCAATGAGAAGGATGATGATGAAGCTGATACAGTAGGTTGTTGCACA TTAAAAATAGAGAATGTGACACCAGAAGCCCCAAACAAGCTACAGTTTAACTTCCTTGGTAAAGATTCAATCAAGTATGAAAATACAGTCGAGGTGGAAC TTCCTGTTTATAATGCAATTTTAAAGTTCCAAAAAGATAAACAACCTGGTGATGATCTTTTCGACATGTTGGATACAAGTAAACTAAATGCTCATCTGAA GGAACTCATGCCCGGCCTAACAGCAAAAGTTTTTCGTACATTCAATGCATCTATCACGTTGGACGATATGTTGAATAAAGATACTAAAGATGGAGATGTT GCGGAAAAGATTGTTGTTTATAATCATGCAAACAAACAGGTTGCAATCATTTGTAATCATCAACGTAGTGTTTCAAAATCTCACAGTGCACAAATGTCGA AGTTAAATGAAAAGATTGATGAACTTAAGGCTGTTCTAAAGGAGCTGAAAACAGATTTGGACAGGGCAAAGAAGGGAAAGTCCCCTTTAAAGAGTTCAGA TGGAAAGACAAAAAAGAATTTAAATCCCGAAGCGTTAGAGAAAAAGATAGCTCAAACAACTACAAAAATTCAGAAAATGCAACGTGATATGAACGCAAAA GAAGATCTAAAAACCGTGGCATTAGGCACGTCCAAGATAAACTACCTCGACCCCAGGATCACAGTGGCTTGGTGCAAACGACATGAGGTTCCTATTGAAA AGATTTTCAACAAATCTCTTTTGGCAAAATTTGCTTGGGCAATGGATGTAGATCCAGACTTCAGATTCTGAGATCTATGGATGGAGACATGCTGCTATGT GGCTGACAAAACATTTCTTTTATTCATTTATTTTCCATAAAATAATTTTTCTGTTTCTCTTTGTCAATCTTAGCTGAAAATTATGTTGTATTTGTATGTA CATCTAATCTAATTATGGGGTAAGTTGTCCCCTTGAGGAATGAAATCACAATTCAGGCAATAACATGTAAAATAGATTTAGAGCTAACAAAGATGATTTT GATTCAGTTGTTGTTAATACTATTCATTTGATGAATATCTTTGTACTAAACTCTACTAATGTTGCTTTTTTAAATTATTTATGTTTATGTTAAAA
• Tissue: flowers
• Gene name: LI_gene_79114;
• Additional information: details;

Expression of Ll_transcript_179586

FPKM

• FPAB: 1.3
• FPNAB: 0.2
• LF1: 1.3
• LF2: 0.2
• LF3: 0.8
• LF4: 0.5
• UF1: 0.9
• UF2: 1.3
• UF3: 0.4
• UF4: 1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_179586

• Blastp: DNA topoisomerase 1 alpha from Arabidopsis with 60.07% of identity
• Blastx: DNA topoisomerase 1 beta from Arabidopsis with 61.74% of identity
• Eggnog: Dna topoisomerase(COG3569)
• Kegg: Link to kegg annotations (AT5G55300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431101.1)
• Pfam: Eukaryotic DNA topoisomerase I, DNA binding fragment (PF02919.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;