| Id Trinity | FTRINITY_DN58681_c4_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_178900 |
| Sequence | CTTTATTCTTCCTCTTCTTCAACACCTCACCAAGGGTGAAGATAATGTTAGCAGCGTCAAAAGGCGATTGGCGCTGATGTTTGGGATATCTCTTAGGAAA ACAGTACCTGGCGAGCCAGATTTAGCGCCGATAGTTGATTCCTGCAGCGAAAAATCTGGTGGAAAATTCGGTGATTACCAATGTAATAATGCAATGGTTC TATGGTCTAAGATAAAAGGGAAGCAGAGAGAATTTAAGGGTCCCCCAGCTATTGGACAGGTTTAGTGAATTAAGGGTAGTTTCCTTATTTTAGTTTACTT GCATGCTTGTATGCTCTCAGTGTCAAATGATAATATCGAGTATCATTTCGTTTCTGCAGGCAATCGTGAAAAATCTTCCTCCATCAGAAATGATAGAATC ATGTTCTGTAGCTGGTCCAGGATTTGTGAATGTTGTCTTATCAAAGAATTGGATAGCACAGATCTTACTGAGGATGCTAATTGATGGTATTGATACATGG GCACCACTACTTCCCGTCAAGACAGCTGTGGTTGATTTTTCCTCACCTAATATAGCAAAGGAAATGCATGTTGGTCACCTGAGATCTACCATTATCGGAG ACACGTTAGCCCGTATGCTTGAATTTTCACATGTGAAAGTTCTCCGCCGAAATCATGTTGGCGACTGGGGAACACAGTTTGGTATGCTGATTGAATTTCT CTTTGAAAAATTTCCAAACCCAGAAGAAGTTAACGAAGCCGCCATTGGAGATCTTCAAGCATTCTATAAGGCCTCAAAACTGAGATTCGATAGTGATCCT GAATTTAAGCAGAGGGCACAACAGGCTGTGGTCCGGCTGCAGGGTGGAGAAGAAAGGTACCGCAAGGCATGGAAGAAAATTTGTGAAATTAGTAGGACTG AATTCCACAGGGTCTATGAACGCCTAGGAGTTACTTTGGAGGAAAAGGGAGAGAGCTTCTATAATCCGTATATCCCTGGGGTTTTGGATGAACTAGACAA TAAAGGGCTGATTAAGGACAGTGAGGGTGCTCGTGTGATATTTGTTGATGGTGTGAATATACCACTTATTGTTGTGAAGAGCGATGGTGGCTACAATTAT GCTTCAACTGATCTAGCAGCACTCTGGTATCGGCTAAATGAAGAAAAAGCTGAGTGGATTATATATGTTACAGATGTTGGGCAGCAGCAACACTTTGATA TGTTTTTTAAGGCTGCTAAACGTGCTGGTTGGCTGCCTGCTGATGATAGCCTGTATCCAAAAGCAACTCATGTAGGTTTTGGTCTTGTTCTTGGGGAAGA CGGAAAACGATTTCGAACTCGCAACACCGAGGTTGTTCGATTGGTTGATTTGCTAGACGAAGCCAAGACTCGCAGTAAAACTGCTGTTCTTGAACGTGAT GCTGCTAAAGATTGGCCTGAGGAGGAGGTTGAGAAAACAGCAGAGGCAGTTGGTTATGGTGCTGTTAAGTATGCTGACTTGAAGAACAACAGATTATCGA ATTACACATTCAATTTTGATCAGATGCTGAATGATAAGGGCAATACTGCTGTTTATTTGCTGTATGCACATGCTAGGATCTGTTCCATTATCAGGAAATC TGGTAAAGACATAGAAGAACTGAAGAAAAACGGGAAAATAGTGTTGGATCATGAGGGTGAGCGTGCATTGGGGCTTCATCTGGTACAATTTTCTGAGGTT GTCGAGGAGGCGTGCACCAATTTATTGCCCAGCACATTGTGTGATTACCTCTATAATCTGTCAGATATCTTCACAAAAAAGTTTTATTCTAATTGCCAGG TTATTGGATCACCCGAGGAAACTAGTAGGTTGTTGCTGTGTGAAGCAACTGCGATCGTGATGAGAAAGTGCTTTTATCTCCTTGGAATTGAACCTGTTTA CAAGATATGACCAATCTGCATGAAAAGTGTTCAAATACAAGTTTTTGCAACTATCCTTTTTTTGTACACTAGTGTAGGAAACGTCCACAGTCAAATTTTC GGGTAAATTTAGTTATTTGCATTTGAGTGTGAAGACAGTAAAAATAGTGAATGCTGAATAACAATTTTACTGACATGGTACAATGAAGTTTGTTTAGATA CTATATTAGTAAACATTGTCATTGCATTATCAGAACTCGTCTTAACGATGATTCACTTTTAAGTAAAAGTCATACACATAATGATGAATGCAATGGCACG TTGTTAATGTAAAGAACAATTCAATCCACTTTTGTATTGTGGGCATGTTAAAGCTTTTCTGAAGATGGGGTAGAGTTGGAGACATGGCTATCCTGTCCAA GCTAGACAAGTATGGAGGAGAATTCAAACTCGGCCGAAGATGAGGACAGTGTACTGAACTTCTAGTCCGGTATGCTCTGGTTGTAGTCATTCTTCAATCT GGTAAGGTTCAAAGAAACACAATGATTACTGTTACGGTGCGACAGTGAGGTTTTGGTGCCTTGGCTAATGTCGGGTGGCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_79156; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_178900
| Blastp | Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 79.5% of identity |
|---|---|
| Blastx | Arginine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 79.5% of identity |
| Eggnog | arginyL-tRNA synthetase(COG0018) |
| Kegg | Link to kegg annotations (AT4G26300) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438560.1) |
| Pfam | Arginyl tRNA synthetase N terminal domain (PF03485.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |